RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 PPP1R15BQ5SWA1 713 aa16.11■□□□□ 0.17
HDHD3-201ENST00000238379 DCAF12L1Q5VU92 463 aa16.11■□□□□ 0.17
HDHD3-201ENST00000238379 ARHGAP17Q68EM7 881 aa16.11■□□□□ 0.17
HDHD3-201ENST00000238379 RASGEF1CQ8N431 466 aa16.11■□□□□ 0.17
HDHD3-201ENST00000238379 C3orf58Q8NDZ4 430 aa16.11■□□□□ 0.17
HDHD3-201ENST00000238379 UBA3Q8TBC4 463 aa16.11■□□□□ 0.17
HDHD3-201ENST00000238379 FEZF2Q8TBJ5 459 aa16.11■□□□□ 0.17
HDHD3-201ENST00000238379 ACTRT1Q8TDG2 376 aa16.11■□□□□ 0.17
HDHD3-201ENST00000238379 KRT35Q92764 455 aa16.11■□□□□ 0.17
HDHD3-201ENST00000238379 SELENOOQ9BVL4 669 aa16.11■□□□□ 0.17
HDHD3-201ENST00000238379 FTHL17Q9BXU8 183 aa16.11■□□□□ 0.17
HDHD3-201ENST00000238379 WNT8AQ9H1J5 351 aa16.11■□□□□ 0.17
HDHD3-201ENST00000238379 CARD9Q9H257 536 aa16.11■□□□□ 0.17
HDHD3-201ENST00000238379 SNX25Q9H3E2 840 aa16.11■□□□□ 0.17
HDHD3-201ENST00000238379 FAM49BQ9NUQ9 324 aa16.11■□□□□ 0.17
HDHD3-201ENST00000238379 TJP2Q9UDY2 1190 aa16.11■□□□□ 0.17
HDHD3-201ENST00000238379 STRIP2Q9ULQ0 834 aa16.11■□□□□ 0.17
HDHD3-201ENST00000238379 TMEM191CA6NGB0 347 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 CASTOR2A6NHX0 329 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 CTNNA2P26232 953 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 GABRB2P47870 512 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 MARCKSL1P49006 195 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 RPL7AP62424 266 aaKnown RBP16.1■□□□□ 0.17
HDHD3-201ENST00000238379 C2orf54Q08AI8 447 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 PDCLQ13371 301 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 GOLGA7BQ2TAP0 167 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 CYP4A22Q5TCH4 519 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 SLC39A5Q6ZMH5 540 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 ANKRD33Q7Z3H0 272 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 OSTM1Q86WC4 334 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 C3orf20Q8ND61 904 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 C18orf8Q96DM3 657 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 ZNF333Q96JL9 665 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 SENP8Q96LD8 212 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 LPIN3Q9BQK8 851 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 INPP5FQ9Y2H2 1132 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 GABRDO14764 452 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 SPOPO43791 374 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 PROSCO94903 275 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 ERBB2P04626 1255 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 CTNNA1P35221 906 aaKnown RBP16.1■□□□□ 0.17
HDHD3-201ENST00000238379 SLC1A1P43005 524 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 AARSP49588 968 aaKnown RBP eCLIP16.1■□□□□ 0.17
HDHD3-201ENST00000238379 ATN1P54259 1190 aaPredicted RBP16.1■□□□□ 0.17
HDHD3-201ENST00000238379 GSCP56915 257 aaPredicted RBP16.1■□□□□ 0.17
HDHD3-201ENST00000238379 RNASE9P60153 205 aaKnown RBP16.1■□□□□ 0.17
HDHD3-201ENST00000238379 TUSC3Q13454 348 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 PLEKHG4Q58EX7 1191 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 WSCD1Q658N2 575 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 DNAJC24Q6P3W2 148 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 TTC30AQ86WT1 665 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 MMGT1Q8N4V1 131 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 DBF4BQ8NFT6 615 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 DDX27Q96GQ7 796 aaKnown RBP16.1■□□□□ 0.17
HDHD3-201ENST00000238379 ANKZF1Q9H8Y5 726 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 PCDHA3Q9Y5H8 950 aa16.1■□□□□ 0.17
HDHD3-201ENST00000238379 CCDC66A2RUB6 948 aa16.09■□□□□ 0.17
HDHD3-201ENST00000238379 C1QTNF8P60827 252 aa16.09■□□□□ 0.17
HDHD3-201ENST00000238379 TAP1Q03518 808 aa16.09■□□□□ 0.17
HDHD3-201ENST00000238379 ZNF268Q14587 947 aaPredicted RBP16.09■□□□□ 0.17
HDHD3-201ENST00000238379 CTU1Q7Z7A3 348 aaKnown RBP16.09■□□□□ 0.17
HDHD3-201ENST00000238379 UBL4BQ8N7F7 174 aa16.09■□□□□ 0.17
HDHD3-201ENST00000238379 MSANTD4Q8NCY6 345 aa16.09■□□□□ 0.17
HDHD3-201ENST00000238379 RBM12Q9NTZ6 932 aaKnown RBP16.09■□□□□ 0.17
HDHD3-201ENST00000238379 WDR35Q9P2L0 1181 aa16.09■□□□□ 0.17
HDHD3-201ENST00000238379 TTC7AQ9ULT0 858 aaPredicted RBP16.09■□□□□ 0.17
HDHD3-201ENST00000238379 PGRMC1O00264 195 aaKnown RBP16.08■□□□□ 0.17
HDHD3-201ENST00000238379 PSMC1P62191 440 aaKnown RBP16.08■□□□□ 0.17
HDHD3-201ENST00000238379 CLLU1OSQ5K130 101 aa16.08■□□□□ 0.17
HDHD3-201ENST00000238379 FBXO46Q6PJ61 603 aaPredicted RBP16.08■□□□□ 0.17
HDHD3-201ENST00000238379 GLB1LQ6UWU2 654 aa16.08■□□□□ 0.17
HDHD3-201ENST00000238379 CD300LGQ6UXG3 332 aa16.08■□□□□ 0.17
HDHD3-201ENST00000238379 XYLT1Q86Y38 959 aa16.08■□□□□ 0.17
HDHD3-201ENST00000238379 SLC35F5Q8WV83 523 aa16.08■□□□□ 0.17
HDHD3-201ENST00000238379 TNIP3Q96KP6 325 aa16.08■□□□□ 0.17
HDHD3-201ENST00000238379 MCEEQ96PE7 176 aa16.08■□□□□ 0.17
HDHD3-201ENST00000238379 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.08■□□□□ 0.173e-8■■■□□ 14.8
HDHD3-201ENST00000238379 IP6K2Q9UHH9 426 aa16.08■□□□□ 0.17
HDHD3-201ENST00000238379 TMEM59LQ9UK28 342 aa16.08■□□□□ 0.17
HDHD3-201ENST00000238379 SIGLEC16A6NMB1 481 aa16.08■□□□□ 0.16
HDHD3-201ENST00000238379 ENPP3O14638 875 aa16.08■□□□□ 0.16
HDHD3-201ENST00000238379 B3GAT3O94766 335 aa16.08■□□□□ 0.16
HDHD3-201ENST00000238379 RHOXF2BP0C7M4 288 aa16.08■□□□□ 0.16
HDHD3-201ENST00000238379 SETSIPP0DME0 302 aa16.08■□□□□ 0.16
HDHD3-201ENST00000238379 COL6A1P12109 1028 aa16.08■□□□□ 0.16
HDHD3-201ENST00000238379 CCDC130P13994 396 aa16.08■□□□□ 0.16
HDHD3-201ENST00000238379 MAN1A1P33908 653 aa16.08■□□□□ 0.16
HDHD3-201ENST00000238379 ZNF252P-AS1Q0IIN9 211 aa16.08■□□□□ 0.16
HDHD3-201ENST00000238379 FAAP100Q0VG06 881 aa16.08■□□□□ 0.16
HDHD3-201ENST00000238379 TIGD5Q53EQ6 642 aa16.08■□□□□ 0.16
HDHD3-201ENST00000238379 DCUN1D2Q6PH85 259 aa16.08■□□□□ 0.16
HDHD3-201ENST00000238379 DSTYKQ6XUX3 929 aa16.08■□□□□ 0.16
HDHD3-201ENST00000238379 FAM43BQ6ZT52 329 aaPredicted RBP16.08■□□□□ 0.16
HDHD3-201ENST00000238379 TMEM86AQ8N2M4 240 aa16.08■□□□□ 0.16
HDHD3-201ENST00000238379 MCRS1Q96EZ8 462 aa16.08■□□□□ 0.16
HDHD3-201ENST00000238379 RNPC3Q96LT9 517 aaKnown RBP16.08■□□□□ 0.16
HDHD3-201ENST00000238379 UROC1Q96N76 676 aa16.08■□□□□ 0.16
HDHD3-201ENST00000238379 TOX2Q96NM4 488 aa16.08■□□□□ 0.16
HDHD3-201ENST00000238379 RHOXF2Q9BQY4 288 aa16.08■□□□□ 0.16
HDHD3-201ENST00000238379 PARD6BQ9BYG5 372 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms