RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 LRRC32Q14392 662 aa17.08■□□□□ 0.32
ERCC1-201ENST00000013807 WDR44Q5JSH3 913 aa17.08■□□□□ 0.32
ERCC1-201ENST00000013807 CCDC65Q8IXS2 484 aa17.08■□□□□ 0.32
ERCC1-201ENST00000013807 SYCP3Q8IZU3 236 aa17.08■□□□□ 0.32
ERCC1-201ENST00000013807 CMTM8Q8IZV2 173 aa17.08■□□□□ 0.32
ERCC1-201ENST00000013807 GPD1LQ8N335 351 aa17.08■□□□□ 0.32
ERCC1-201ENST00000013807 TOP6BLQ8N6T0 577 aa17.08■□□□□ 0.32
ERCC1-201ENST00000013807 TRMT2BQ96GJ1 504 aaKnown RBP17.08■□□□□ 0.32
ERCC1-201ENST00000013807 MYRFLQ96LU7 910 aa17.08■□□□□ 0.32
ERCC1-201ENST00000013807 FAM83CQ9BQN1 747 aa17.08■□□□□ 0.32
ERCC1-201ENST00000013807 PANK2Q9BZ23 570 aa17.08■□□□□ 0.32
ERCC1-201ENST00000013807 SIX4Q9UIU6 781 aa17.08■□□□□ 0.32
ERCC1-201ENST00000013807 L1RE1Q9UN81 338 aa17.08■□□□□ 0.32
ERCC1-201ENST00000013807 SLC38A8A6NNN8 435 aa17.07■□□□□ 0.32
ERCC1-201ENST00000013807 HUS1O60921 280 aa17.07■□□□□ 0.32
ERCC1-201ENST00000013807 CSH1P0DML2 217 aa17.07■□□□□ 0.32
ERCC1-201ENST00000013807 CSH2P0DML3 217 aa17.07■□□□□ 0.32
ERCC1-201ENST00000013807 LHX1P48742 406 aa17.07■□□□□ 0.32
ERCC1-201ENST00000013807 NLRP12P59046 1061 aa17.07■□□□□ 0.32
ERCC1-201ENST00000013807 RBP5P82980 135 aa17.07■□□□□ 0.32
ERCC1-201ENST00000013807 TSPY1Q01534 308 aa17.07■□□□□ 0.32
ERCC1-201ENST00000013807 PUM1Q14671 1186 aaKnown RBP eCLIP17.07■□□□□ 0.32
ERCC1-201ENST00000013807 CFAP221Q4G0U5 840 aa17.07■□□□□ 0.32
ERCC1-201ENST00000013807 SCARA3Q6AZY7 606 aa17.07■□□□□ 0.32
ERCC1-201ENST00000013807 TXNDC11Q6PKC3 985 aa17.07■□□□□ 0.32
ERCC1-201ENST00000013807 CSGALNACT2Q8N6G5 542 aa17.07■□□□□ 0.32
ERCC1-201ENST00000013807 FAM200AQ8TCP9 573 aa17.07■□□□□ 0.32
ERCC1-201ENST00000013807 GCNAQ96QF7 691 aa17.07■□□□□ 0.32
ERCC1-201ENST00000013807 TRIM9Q9C026 710 aa17.07■□□□□ 0.32
ERCC1-201ENST00000013807 PDE11AQ9HCR9 933 aa17.07■□□□□ 0.32
ERCC1-201ENST00000013807 INTS13Q9NVM9 706 aa17.07■□□□□ 0.32
ERCC1-201ENST00000013807 DDX43Q9NXZ2 648 aaKnown RBP17.07■□□□□ 0.32
ERCC1-201ENST00000013807 ABI2Q9NYB9 513 aaPredicted RBP17.07■□□□□ 0.32
ERCC1-201ENST00000013807 GTSE1Q9NYZ3 720 aa17.07■□□□□ 0.32
ERCC1-201ENST00000013807 EML5Q05BV3 1969 aa17.06■□□□□ 0.32
ERCC1-201ENST00000013807 MYO16Q9Y6X6 1858 aa17.06■□□□□ 0.32
ERCC1-201ENST00000013807 SPTLC2O15270 562 aa17.06■□□□□ 0.32
ERCC1-201ENST00000013807 EIF3DO15371 548 aaKnown RBP eCLIP17.06■□□□□ 0.32
ERCC1-201ENST00000013807 PRPF6O94906 941 aaKnown RBP17.06■□□□□ 0.32
ERCC1-201ENST00000013807 TGM1P22735 817 aa17.06■□□□□ 0.32
ERCC1-201ENST00000013807 HOXD13P35453 343 aa17.06■□□□□ 0.32
ERCC1-201ENST00000013807 KPNA1P52294 538 aaPredicted RBP17.06■□□□□ 0.32
ERCC1-201ENST00000013807 CYP4F8P98187 520 aa17.06■□□□□ 0.32
ERCC1-201ENST00000013807 MYL7Q01449 175 aa17.06■□□□□ 0.32
ERCC1-201ENST00000013807 ZNF268Q14587 947 aaPredicted RBP17.06■□□□□ 0.32
ERCC1-201ENST00000013807 SURF1Q15526 300 aa17.06■□□□□ 0.32
ERCC1-201ENST00000013807 SOWAHAQ2M3V2 549 aa17.06■□□□□ 0.32
ERCC1-201ENST00000013807 INTS6LQ5JSJ4 861 aaKnown RBP17.06■□□□□ 0.32
ERCC1-201ENST00000013807 FAM171BQ6P995 826 aa17.06■□□□□ 0.32
ERCC1-201ENST00000013807 STXBP4Q6ZWJ1 553 aa17.06■□□□□ 0.32
ERCC1-201ENST00000013807 EPM2AIP1Q7L775 607 aaPredicted RBP17.06■□□□□ 0.32
ERCC1-201ENST00000013807 ZNF507Q8TCN5 953 aa17.06■□□□□ 0.32
ERCC1-201ENST00000013807 GIPC2Q8TF65 315 aa17.06■□□□□ 0.32
ERCC1-201ENST00000013807 FUBP3Q96I24 572 aaKnown RBP eCLIP17.06■□□□□ 0.32
ERCC1-201ENST00000013807 ZFYVE19Q96K21 471 aa17.06■□□□□ 0.32
ERCC1-201ENST00000013807 CEP295NLQ96MC4 621 aa17.06■□□□□ 0.32
ERCC1-201ENST00000013807 KIF9Q9HAQ2 790 aa17.06■□□□□ 0.32
ERCC1-201ENST00000013807 KIAA1586Q9HCI6 787 aa17.06■□□□□ 0.32
ERCC1-201ENST00000013807 THG1LQ9NWX6 298 aaKnown RBP17.06■□□□□ 0.32
ERCC1-201ENST00000013807 SMG5Q9UPR3 1016 aaKnown RBP17.06■□□□□ 0.32
ERCC1-201ENST00000013807 NCOR2Q9Y618 2525 aa17.05■□□□□ 0.32
ERCC1-201ENST00000013807 SPTBN2O15020 2390 aa17.05■□□□□ 0.32
ERCC1-201ENST00000013807 GOLGA8IPA6NC78 632 aa17.05■□□□□ 0.32
ERCC1-201ENST00000013807 ZNF233A6NK53 670 aa17.05■□□□□ 0.32
ERCC1-201ENST00000013807 GOLGA8JA6NMD2 632 aa17.05■□□□□ 0.32
ERCC1-201ENST00000013807 K7ESF4 209 aa17.05■□□□□ 0.32
ERCC1-201ENST00000013807 NOL4O94818 638 aa17.05■□□□□ 0.32
ERCC1-201ENST00000013807 YEATS4O95619 227 aa17.05■□□□□ 0.32
ERCC1-201ENST00000013807 CNR2P34972 360 aa17.05■□□□□ 0.32
ERCC1-201ENST00000013807 SOX9P48436 509 aa17.05■□□□□ 0.32
ERCC1-201ENST00000013807 RPL10AP62906 217 aaKnown RBP17.05■□□□□ 0.32
ERCC1-201ENST00000013807 AMPD3Q01432 767 aa17.05■□□□□ 0.32
ERCC1-201ENST00000013807 EHHADHQ08426 723 aa17.05■□□□□ 0.32
ERCC1-201ENST00000013807 STK38Q15208 465 aa17.05■□□□□ 0.32
ERCC1-201ENST00000013807 TAF12Q16514 161 aa17.05■□□□□ 0.32
ERCC1-201ENST00000013807 ITPRIPL2Q3MIP1 535 aa17.05■□□□□ 0.32
ERCC1-201ENST00000013807 MON1AQ86VX9 555 aa17.05■□□□□ 0.32
ERCC1-201ENST00000013807 GPIHBP1Q8IV16 184 aa17.05■□□□□ 0.32
ERCC1-201ENST00000013807 PDILTQ8N807 584 aa17.05■□□□□ 0.32
ERCC1-201ENST00000013807 SECISBP2LQ93073 1101 aaKnown RBP17.05■□□□□ 0.32
ERCC1-201ENST00000013807 SNX21Q969T3 373 aa17.05■□□□□ 0.32
ERCC1-201ENST00000013807 HINFPQ9BQA5 517 aa17.05■□□□□ 0.32
ERCC1-201ENST00000013807 MTMR12Q9C0I1 747 aa17.05■□□□□ 0.32
ERCC1-201ENST00000013807 PCIF1Q9H4Z3 704 aa17.05■□□□□ 0.32
ERCC1-201ENST00000013807 TDP1Q9NUW8 608 aa17.05■□□□□ 0.32
ERCC1-201ENST00000013807 NCDNQ9UBB6 729 aa17.05■□□□□ 0.32
ERCC1-201ENST00000013807 UXTQ9UBK9 157 aaPredicted RBP17.05■□□□□ 0.32
ERCC1-201ENST00000013807 SDK1Q7Z5N4 2213 aa17.04■□□□□ 0.32
ERCC1-201ENST00000013807 CUTAO60888 179 aa17.04■□□□□ 0.32
ERCC1-201ENST00000013807 PRPF40AO75400 957 aaKnown RBP17.04■□□□□ 0.32
ERCC1-201ENST00000013807 FAM163BP0C2L3 166 aa17.04■□□□□ 0.32
ERCC1-201ENST00000013807 SDHBP21912 280 aa17.04■□□□□ 0.32
ERCC1-201ENST00000013807 CYP2F1P24903 491 aa17.04■□□□□ 0.32
ERCC1-201ENST00000013807 PCSK1P29120 753 aa17.04■□□□□ 0.32
ERCC1-201ENST00000013807 AVPR1AP37288 418 aa17.04■□□□□ 0.32
ERCC1-201ENST00000013807 MAGEA11P43364 429 aa17.04■□□□□ 0.32
ERCC1-201ENST00000013807 SNRPFP62306 86 aaKnown RBP17.04■□□□□ 0.32
ERCC1-201ENST00000013807 SATB1Q01826 763 aa17.04■□□□□ 0.32
ERCC1-201ENST00000013807 DUOXA2Q1HG44 320 aa17.04■□□□□ 0.32
ERCC1-201ENST00000013807 OSTM1Q86WC4 334 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms