RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 FAM13CQ8NE31 585 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 FAM151AQ8WW52 585 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 CCDC28BQ9BUN5 200 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 TMEM39BQ9GZU3 492 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 WNT8AQ9H1J5 351 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 TPK1Q9H3S4 243 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 AGO4Q9HCK5 861 aaKnown RBP13.12□□□□□ -0.31
LITAF-221ENST00000622633 PCYOX1Q9UHG3 505 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 PCDHA3Q9Y5H8 950 aa13.12□□□□□ -0.31
LITAF-221ENST00000622633 UNCXA6NJT0 531 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 CCDC169A6NNP5 214 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 PODXLO00592 558 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 RAD17O75943 681 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 MAPTP10636 758 aaKnown RBP13.11□□□□□ -0.31
LITAF-221ENST00000622633 HOXD10P28358 340 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 CAP2P40123 477 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 SLCO1A2P46721 670 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 HSD17B4P51659 736 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 GTF2BQ00403 316 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 FMO1Q01740 532 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 ALCAMQ13740 583 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 TNIP1Q15025 636 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 UGCGQ16739 394 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 PARP6Q2NL67 630 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 TKFCQ3LXA3 575 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 CCDC153Q494R4 210 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 SLC13A5Q86YT5 568 aaPredicted RBP13.11□□□□□ -0.31
LITAF-221ENST00000622633 C12orf56Q8IXR9 622 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 CCDC105Q8IYK2 499 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 CPXCR1Q8N123 301 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 FITM2Q8N6M3 262 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 TTC8Q8TAM2 541 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 ZNF564Q8TBZ8 553 aaPredicted RBP13.11□□□□□ -0.31
LITAF-221ENST00000622633 SCG3Q8WXD2 468 aaKnown RBP13.11□□□□□ -0.31
LITAF-221ENST00000622633 CD101Q93033 1021 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 VTI1AQ96AJ9 217 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 CEP295NLQ96MC4 621 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 BTBD7Q9P203 1132 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 DBR1Q9UK59 544 aaKnown RBP13.11□□□□□ -0.31
LITAF-221ENST00000622633 RGS16O15492 202 aaPredicted RBP13.11□□□□□ -0.31
LITAF-221ENST00000622633 OXSR1O95747 527 aaPredicted RBP13.11□□□□□ -0.31
LITAF-221ENST00000622633 CDK4P11802 303 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 ALAS1P13196 640 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 YWHABP31946 246 aaKnown RBP13.11□□□□□ -0.31
LITAF-221ENST00000622633 COILP38432 576 aaPredicted RBP13.11□□□□□ -0.31
LITAF-221ENST00000622633 ARFIP2P53365 341 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 KPNB1Q14974 876 aaKnown RBP13.11□□□□□ -0.31
LITAF-221ENST00000622633 DLGAP5Q15398 846 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 FAM102BQ5T8I3 360 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 BPHLQ86WA6 291 aaPredicted RBP13.11□□□□□ -0.31
LITAF-221ENST00000622633 C7orf43Q8WVR3 580 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 KIFC3Q9BVG8 833 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 ADAM7Q9H2U9 754 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 MRPL46Q9H2W6 279 aaKnown RBP13.11□□□□□ -0.31
LITAF-221ENST00000622633 HOMER2Q9NSB8 354 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 STK32BQ9NY57 414 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 MTRF1LQ9UGC7 380 aaKnown RBP13.11□□□□□ -0.31
LITAF-221ENST00000622633 CD2APQ9Y5K6 639 aa13.11□□□□□ -0.31
LITAF-221ENST00000622633 RBBP6Q7Z6E9 1792 aaKnown RBP13.1□□□□□ -0.31
LITAF-221ENST00000622633 CNTNAP1P78357 1384 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 ZNF536O15090 1300 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 PLA2G6O60733 806 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 CALCAP01258 141 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 PABPC4LP0CB38 370 aaKnown RBP13.1□□□□□ -0.31
LITAF-221ENST00000622633 GZMAP12544 262 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 ADSSP30520 456 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 CDK7P50613 346 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 MRPS9P82933 396 aaKnown RBP13.1□□□□□ -0.31
LITAF-221ENST00000622633 LMNB2Q03252 620 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 C6orf183Q5T699 404 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 PLA2G4FQ68DD2 849 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 FAM47EQ6ZV65 393 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 OTUD6AQ7L8S5 288 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 CCDC25Q86WR0 208 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 EPS8L3Q8TE67 593 aaKnown RBP13.1□□□□□ -0.31
LITAF-221ENST00000622633 NRG4Q8WWG1 115 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 CLEC4DQ8WXI8 215 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 PGM2Q96G03 612 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 SLC39A3Q9BRY0 314 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 DRC3Q9H069 523 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 TOPORSQ9NS56 1045 aaPredicted RBP13.1□□□□□ -0.31
LITAF-221ENST00000622633 CARD8Q9Y2G2 431 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 USP15Q9Y4E8 981 aaPredicted RBP13.1□□□□□ -0.31
LITAF-221ENST00000622633 BTBD19C9JJ37 291 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 MTA2O94776 668 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 GGPS1O95749 300 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 CYP1A2P05177 515 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 ICAM1P05362 532 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 CYP11B1P15538 503 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 SKIV2L2P42285 1042 aaKnown RBP13.1□□□□□ -0.31
LITAF-221ENST00000622633 PTGER2P43116 358 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 MFAP3P55082 362 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 SIX1Q15475 284 aaPredicted RBP13.1□□□□□ -0.31
LITAF-221ENST00000622633 SNRNP35Q16560 246 aaKnown RBP13.1□□□□□ -0.31
LITAF-221ENST00000622633 PDCD4Q53EL6 469 aaKnown RBP13.1□□□□□ -0.31
LITAF-221ENST00000622633 TMEM214Q6NUQ4 689 aaKnown RBP13.1□□□□□ -0.31
LITAF-221ENST00000622633 TRIM67Q6ZTA4 783 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 GAB3Q8WWW8 586 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 SHC3Q92529 594 aa13.1□□□□□ -0.31
LITAF-221ENST00000622633 DHX38Q92620 1227 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms