RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 PAFAH2Q99487 392 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 KANSL3Q9P2N6 904 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 UVRAGQ9P2Y5 699 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 AGTPBP1Q9UPW5 1226 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 AHDC1Q5TGY3 1603 aaPredicted RBP13.84□□□□□ -0.19
MSH6-214ENST00000616033 CIB2O75838 187 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 OR6B1O95007 311 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 CYP1A2P05177 515 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 LYNP07948 512 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 PRELPP51888 382 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 MPP3Q13368 585 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 RASA2Q15283 850 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 SLC45A4Q5BKX6 768 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 LPCAT4Q643R3 524 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 ZCCHC23Q6ZST2 131 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 KRT27Q7Z3Y8 459 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 NCAPG2Q86XI2 1143 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 SLC26A7Q8TE54 656 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 PLEKHG4BQ96PX9 1271 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 KRT82Q9NSB4 513 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 PSMC3IPQ9P2W1 217 aaPredicted RBP13.84□□□□□ -0.19
MSH6-214ENST00000616033 F5H423 210 aaPredicted RBP13.84□□□□□ -0.19
MSH6-214ENST00000616033 APBA3O96018 575 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 LMNAP02545 664 aaKnown RBP13.84□□□□□ -0.19
MSH6-214ENST00000616033 GZMAP12544 262 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 HOXA7P31268 230 aaPredicted RBP13.84□□□□□ -0.19
MSH6-214ENST00000616033 USP46P62068 366 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 AP3B2Q13367 1082 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 LBRQ14739 615 aaKnown RBP13.84□□□□□ -0.19
MSH6-214ENST00000616033 C6orf163Q5TEZ5 329 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 TXNRD3NBQ6F5E7 133 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 TMEM270Q6UE05 265 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 CENPUQ71F23 418 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 ACAP3Q96P50 834 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 DDX18Q9NVP1 670 aaKnown RBP13.84□□□□□ -0.19
MSH6-214ENST00000616033 LGALS13Q9UHV8 139 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 ASB3Q9Y575 518 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 PAPPAQ13219 1627 aa13.84□□□□□ -0.19
MSH6-214ENST00000616033 E2F8A0AVK6 867 aa13.83□□□□□ -0.19
MSH6-214ENST00000616033 DDTLA6NHG4 134 aaPredicted RBP13.83□□□□□ -0.19
MSH6-214ENST00000616033 COQ9O75208 318 aa13.83□□□□□ -0.19
MSH6-214ENST00000616033 GH2P01242 217 aa13.83□□□□□ -0.19
MSH6-214ENST00000616033 SERPINB6P35237 376 aa13.83□□□□□ -0.19
MSH6-214ENST00000616033 WDR72Q3MJ13 1102 aa13.83□□□□□ -0.19
MSH6-214ENST00000616033 SEZ6Q53EL9 994 aa13.83□□□□□ -0.19
MSH6-214ENST00000616033 C1orf220Q5T0J3 134 aa13.83□□□□□ -0.19
MSH6-214ENST00000616033 ANKRD22Q5VYY1 191 aa13.83□□□□□ -0.19
MSH6-214ENST00000616033 DCUN1D2Q6PH85 259 aa13.83□□□□□ -0.19
MSH6-214ENST00000616033 RASSF3Q86WH2 238 aa13.83□□□□□ -0.19
MSH6-214ENST00000616033 CPXCR1Q8N123 301 aa13.83□□□□□ -0.19
MSH6-214ENST00000616033 ENDOVQ8N8Q3 282 aaKnown RBP13.83□□□□□ -0.19
MSH6-214ENST00000616033 FAM136AQ96C01 138 aa13.83□□□□□ -0.19
MSH6-214ENST00000616033 FAM213AQ9BRX8 229 aa13.83□□□□□ -0.19
MSH6-214ENST00000616033 RAB20Q9NX57 234 aa13.83□□□□□ -0.19
MSH6-214ENST00000616033 NDE1Q9NXR1 346 aa13.83□□□□□ -0.19
MSH6-214ENST00000616033 C2CD2LO14523 706 aa13.83□□□□□ -0.2
MSH6-214ENST00000616033 ZSCAN9O15535 394 aaPredicted RBP13.83□□□□□ -0.2
MSH6-214ENST00000616033 PDE5AO76074 875 aa13.83□□□□□ -0.2
MSH6-214ENST00000616033 SORBS2O94875 1100 aaKnown RBP13.83□□□□□ -0.2
MSH6-214ENST00000616033 SREBF1P36956 1147 aa13.83□□□□□ -0.2
MSH6-214ENST00000616033 TMPRSS15P98073 1019 aa13.83□□□□□ -0.2
MSH6-214ENST00000616033 CAV1Q03135 178 aa13.83□□□□□ -0.2
MSH6-214ENST00000616033 PEX6Q13608 980 aa13.83□□□□□ -0.2
MSH6-214ENST00000616033 HIF1AQ16665 826 aa13.83□□□□□ -0.2
MSH6-214ENST00000616033 CNPY1Q3B7I2 92 aa13.83□□□□□ -0.2
MSH6-214ENST00000616033 CDC42EP5Q6NZY7 148 aa13.83□□□□□ -0.2
MSH6-214ENST00000616033 MCOLN2Q8IZK6 566 aa13.83□□□□□ -0.2
MSH6-214ENST00000616033 RIBC1Q8N443 379 aaPredicted RBP13.83□□□□□ -0.2
MSH6-214ENST00000616033 DENND1AQ8TEH3 1009 aa13.83□□□□□ -0.2
MSH6-214ENST00000616033 CFAP36Q96G28 342 aa13.83□□□□□ -0.2
MSH6-214ENST00000616033 ACCSQ96QU6 501 aa13.83□□□□□ -0.2
MSH6-214ENST00000616033 POLR3CQ9BUI4 534 aaPredicted RBP13.83□□□□□ -0.2
MSH6-214ENST00000616033 ETNK2Q9NVF9 386 aa13.83□□□□□ -0.2
MSH6-214ENST00000616033 DMAC2Q9NW81 257 aa13.83□□□□□ -0.2
MSH6-214ENST00000616033 SMG5Q9UPR3 1016 aaKnown RBP13.83□□□□□ -0.2
MSH6-214ENST00000616033 IPO5O00410 1097 aaKnown RBP13.83□□□□□ -0.2
MSH6-214ENST00000616033 ECE1P42892 770 aa13.83□□□□□ -0.2
MSH6-214ENST00000616033 MSS51Q4VC12 460 aa13.83□□□□□ -0.2
MSH6-214ENST00000616033 SLC10A5Q5PT55 438 aa13.83□□□□□ -0.2
MSH6-214ENST00000616033 MTHFD1LQ6UB35 978 aa13.83□□□□□ -0.2
MSH6-214ENST00000616033 RIPOR1Q6ZS17 1223 aa13.83□□□□□ -0.2
MSH6-214ENST00000616033 RHOT1Q8IXI2 618 aa13.83□□□□□ -0.2
MSH6-214ENST00000616033 FBXO36Q8NEA4 188 aa13.83□□□□□ -0.2
MSH6-214ENST00000616033 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.83□□□□□ -0.2
MSH6-214ENST00000616033 PPM1HQ9ULR3 514 aa13.83□□□□□ -0.2
MSH6-214ENST00000616033 CYP3A7-CYP3A51PA0A087WV96 503 aa13.82□□□□□ -0.2
MSH6-214ENST00000616033 LOC100653049A0A140TA62 436 aa13.82□□□□□ -0.2
MSH6-214ENST00000616033 RBM47A0AV96 593 aaKnown RBP13.82□□□□□ -0.2
MSH6-214ENST00000616033 E5RJQ4 531 aa13.82□□□□□ -0.2
MSH6-214ENST00000616033 CYB561D2O14569 222 aa13.82□□□□□ -0.2
MSH6-214ENST00000616033 KRT34O76011 436 aa13.82□□□□□ -0.2
MSH6-214ENST00000616033 CYP3A7P24462 503 aa13.82□□□□□ -0.2
MSH6-214ENST00000616033 HIRAP54198 1017 aaPredicted RBP13.82□□□□□ -0.2
MSH6-214ENST00000616033 GABPAQ06546 454 aa13.82□□□□□ -0.2
MSH6-214ENST00000616033 NFX1Q12986 1120 aaKnown RBP13.82□□□□□ -0.2
MSH6-214ENST00000616033 GRAMD1BQ3KR37 738 aa13.82□□□□□ -0.2
MSH6-214ENST00000616033 XKR9Q5GH70 373 aa13.82□□□□□ -0.2
MSH6-214ENST00000616033 KRT39Q6A163 491 aa13.82□□□□□ -0.2
MSH6-214ENST00000616033 DPH6Q7L8W6 267 aa13.82□□□□□ -0.2
MSH6-214ENST00000616033 PRPF39Q86UA1 669 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms