RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 PPIL6Q8IXY8 311 aa14.34□□□□□ -0.11
CHD1-212ENST00000614616 C9orf16Q9BUW7 83 aa14.34□□□□□ -0.11
CHD1-212ENST00000614616 TK2O00142 265 aa14.33□□□□□ -0.11
CHD1-212ENST00000614616 PFKFB3Q16875 520 aaPredicted RBP14.33□□□□□ -0.11
CHD1-212ENST00000614616 CCDC33Q8N5R6 958 aa14.33□□□□□ -0.11
CHD1-212ENST00000614616 SCFD1Q8WVM8 642 aa14.33□□□□□ -0.11
CHD1-212ENST00000614616 FRMD8Q9BZ67 464 aaPredicted RBP14.33□□□□□ -0.11
CHD1-212ENST00000614616 KIAA1683Q9H0B3 1180 aa14.33□□□□□ -0.11
CHD1-212ENST00000614616 HDHD2Q9H0R4 259 aa14.33□□□□□ -0.11
CHD1-212ENST00000614616 PICK1Q9NRD5 415 aa14.33□□□□□ -0.11
CHD1-212ENST00000614616 TMEM161AQ9NX61 479 aa14.33□□□□□ -0.11
CHD1-212ENST00000614616 UBA2Q9UBT2 640 aaPredicted RBP14.33□□□□□ -0.11
CHD1-212ENST00000614616 TFAMQ00059 246 aaKnown RBP14.33□□□□□ -0.12
CHD1-212ENST00000614616 SCRN3Q0VDG4 424 aa14.33□□□□□ -0.12
CHD1-212ENST00000614616 PPHLN1Q8NEY8 458 aaKnown RBP14.33□□□□□ -0.12
CHD1-212ENST00000614616 KLHL3Q9UH77 587 aa14.33□□□□□ -0.12
CHD1-212ENST00000614616 DLG4P78352 724 aa14.33□□□□□ -0.12
CHD1-212ENST00000614616 OVGP1Q12889 678 aa14.33□□□□□ -0.12
CHD1-212ENST00000614616 TSTA3Q13630 321 aaPredicted RBP14.33□□□□□ -0.12
CHD1-212ENST00000614616 DDR2Q16832 855 aa14.33□□□□□ -0.12
CHD1-212ENST00000614616 PRMT9Q6P2P2 845 aa14.33□□□□□ -0.12
CHD1-212ENST00000614616 ULK4Q96C45 1275 aa14.33□□□□□ -0.12
CHD1-212ENST00000614616 FAM111AQ96PZ2 611 aa14.33□□□□□ -0.12
CHD1-212ENST00000614616 SENP7Q9BQF6 1050 aa14.33□□□□□ -0.12
CHD1-212ENST00000614616 MOV10Q9HCE1 1003 aaKnown RBP14.33□□□□□ -0.12
CHD1-212ENST00000614616 RPRD1BQ9NQG5 326 aaKnown RBP14.33□□□□□ -0.12
CHD1-212ENST00000614616 C1DQ13901 141 aaKnown RBP14.33□□□□□ -0.12
CHD1-212ENST00000614616 GLYCTKQ8IVS8 523 aa14.33□□□□□ -0.12
CHD1-212ENST00000614616 HEXIM2Q96MH2 286 aaKnown RBP14.33□□□□□ -0.12
CHD1-212ENST00000614616 AMNQ9BXJ7 453 aa14.33□□□□□ -0.12
CHD1-212ENST00000614616 THRAP3Q9Y2W1 955 aaKnown RBP14.33□□□□□ -0.12
CHD1-212ENST00000614616 FRMPD1Q5SYB0 1578 aa14.33□□□□□ -0.12
CHD1-212ENST00000614616 GAS2O43903 313 aaKnown RBP14.33□□□□□ -0.12
CHD1-212ENST00000614616 ERVK-24P63145 666 aa14.33□□□□□ -0.12
CHD1-212ENST00000614616 FGD2Q7Z6J4 655 aa14.33□□□□□ -0.12
CHD1-212ENST00000614616 PGBD4Q96DM1 585 aa14.33□□□□□ -0.12
CHD1-212ENST00000614616 ERGIC2Q96RQ1 377 aa14.33□□□□□ -0.12
CHD1-212ENST00000614616 APEX2Q9UBZ4 518 aa14.33□□□□□ -0.12
CHD1-212ENST00000614616 WDR17Q8IZU2 1322 aa14.33□□□□□ -0.12
CHD1-212ENST00000614616 H3BNX3 289 aa14.33□□□□□ -0.12
CHD1-212ENST00000614616 MYO1DO94832 1006 aa14.33□□□□□ -0.12
CHD1-212ENST00000614616 WEE2P0C1S8 567 aa14.33□□□□□ -0.12
CHD1-212ENST00000614616 UGP2Q16851 508 aa14.33□□□□□ -0.12
CHD1-212ENST00000614616 ECSITQ9BQ95 431 aa14.33□□□□□ -0.12
CHD1-212ENST00000614616 SQORQ9Y6N5 450 aa14.33□□□□□ -0.12
CHD1-212ENST00000614616 TBC1D12O60347 775 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 KCNK10P57789 538 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 ATG14Q6ZNE5 492 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 XXYLT1Q8NBI6 393 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 KCNB2Q92953 911 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 C7orf25Q9BPX7 421 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 GDF3Q9NR23 364 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 ERVK-7P63135 1459 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 NLRP1Q9C000 1473 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 LOC100653049A0A140TA62 436 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 E5RI56 91 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 KRT34O76011 436 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 LDHAP00338 332 aaKnown RBP14.32□□□□□ -0.12
CHD1-212ENST00000614616 CD58P19256 250 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 ADORA1P30542 326 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 XIAPP98170 497 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 ZNF746Q6NUN9 644 aaPredicted RBP14.32□□□□□ -0.12
CHD1-212ENST00000614616 C4orf22Q6V702 233 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 BFARQ9NZS9 450 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 FOXN1O15353 648 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 DPP8Q6V1X1 898 aaPredicted RBP14.32□□□□□ -0.12
CHD1-212ENST00000614616 OR7A2PQ8NGA2 310 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 DIS3LQ8TF46 1054 aaKnown RBP14.32□□□□□ -0.12
CHD1-212ENST00000614616 C18orf8Q96DM3 657 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 TSPAN18Q96SJ8 248 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 TASP1Q9H6P5 420 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 ENTPD7Q9NQZ7 604 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 ADAMTS12P58397 1594 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 NPTXRO95502 500 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 PIK3R1P27986 724 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 PDPK2PQ6A1A2 396 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 TRNAU1APQ9NX07 287 aaKnown RBP14.32□□□□□ -0.12
CHD1-212ENST00000614616 PRLP01236 227 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 ABCB1P08183 1280 aaPredicted RBP14.32□□□□□ -0.12
CHD1-212ENST00000614616 CNTFP26441 200 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 MMRN1Q13201 1228 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 LINC00854A0A1B0GVQ3 168 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 TYW5A2RUC4 315 aaKnown RBP14.32□□□□□ -0.12
CHD1-212ENST00000614616 FAM196BA6NMK8 535 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 NFKBIAP25963 317 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 AQP5P55064 265 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 TMEM270Q6UE05 265 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 RRM2BQ7LG56 351 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 TADA1Q96BN2 335 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 RBM17Q96I25 401 aaKnown RBP14.32□□□□□ -0.12
CHD1-212ENST00000614616 NGRNQ9NPE2 291 aaKnown RBP14.32□□□□□ -0.12
CHD1-212ENST00000614616 AFF2P51816 1311 aa14.32□□□□□ -0.12
CHD1-212ENST00000614616 DPPA5A6NC42 116 aa14.31□□□□□ -0.12
CHD1-212ENST00000614616 TFDP1Q14186 410 aa14.31□□□□□ -0.12
CHD1-212ENST00000614616 RNF19BQ6ZMZ0 732 aa14.31□□□□□ -0.12
CHD1-212ENST00000614616 RBBP8Q99708 897 aa14.31□□□□□ -0.12
CHD1-212ENST00000614616 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.31□□□□□ -0.12
CHD1-212ENST00000614616 IL1RL2Q9HB29 575 aa14.31□□□□□ -0.12
CHD1-212ENST00000614616 GPBP1L1Q9HC44 474 aaPredicted RBP14.31□□□□□ -0.12
CHD1-212ENST00000614616 GLI1P08151 1106 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms