RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 OR10T2Q8NGX3 314 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 ITFG1Q8TB96 612 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 TMEM174Q8WUU8 243 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 ING5Q8WYH8 240 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 MCRS1Q96EZ8 462 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 KCTD10Q9H3F6 313 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 C11orf16Q9NQ32 467 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 ZMYM5Q9UJ78 669 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 L1RE1Q9UN81 338 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 SLC27A5Q9Y2P5 690 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 NUMBLQ9Y6R0 609 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 MYO10Q9HD67 2058 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 MAPK13O15264 365 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 STX10O60499 249 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 N4BP1O75113 896 aaKnown RBP13.22□□□□□ -0.29
CBWD3-208ENST00000612050 FAM163BP0C2L3 166 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 CDC25CP30307 473 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 PSMC2P35998 433 aaKnown RBP13.22□□□□□ -0.29
CBWD3-208ENST00000612050 WNT7BP56706 349 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 PNOCQ13519 176 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 NFIL3Q16649 462 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 WDR72Q3MJ13 1102 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 ZNF667Q5HYK9 610 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 INTS6LQ5JSJ4 861 aaKnown RBP13.22□□□□□ -0.29
CBWD3-208ENST00000612050 ZNF658Q5TYW1 1059 aaPredicted RBP13.22□□□□□ -0.29
CBWD3-208ENST00000612050 NPAS3Q8IXF0 933 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 SLC44A3Q8N4M1 653 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 TMC2Q8TDI7 906 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 E2F7Q96AV8 911 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 BORCS6Q96GS4 357 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 SHDQ96IW2 340 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 ZFP14Q9HCL3 533 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 ABCB6Q9NP58 842 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 EHD2Q9NZN4 543 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 WNT16Q9UBV4 365 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 SIX4Q9UIU6 781 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 CDH9Q9ULB4 789 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 MAPK8IP1Q9UQF2 711 aa13.22□□□□□ -0.29
CBWD3-208ENST00000612050 ARIH1Q9Y4X5 557 aaPredicted RBP13.22□□□□□ -0.29
CBWD3-208ENST00000612050 C5orf42Q9H799 3197 aa13.21□□□□□ -0.29
CBWD3-208ENST00000612050 ANHXE9PGG2 379 aa13.21□□□□□ -0.3
CBWD3-208ENST00000612050 IKBKBO14920 756 aa13.21□□□□□ -0.3
CBWD3-208ENST00000612050 CETN3O15182 167 aa13.21□□□□□ -0.3
CBWD3-208ENST00000612050 CFHP08603 1231 aa13.21□□□□□ -0.3
CBWD3-208ENST00000612050 CSH1P0DML2 217 aa13.21□□□□□ -0.3
CBWD3-208ENST00000612050 CSH2P0DML3 217 aa13.21□□□□□ -0.3
CBWD3-208ENST00000612050 EPB41P11171 864 aaKnown RBP13.21□□□□□ -0.3
CBWD3-208ENST00000612050 ANXA13P27216 316 aa13.21□□□□□ -0.3
CBWD3-208ENST00000612050 ADAM9Q13443 819 aa13.21□□□□□ -0.3
CBWD3-208ENST00000612050 HTR4Q13639 388 aa13.21□□□□□ -0.3
CBWD3-208ENST00000612050 ZNF699Q32M78 642 aa13.21□□□□□ -0.3
CBWD3-208ENST00000612050 EDRF1Q3B7T1 1238 aa13.21□□□□□ -0.3
CBWD3-208ENST00000612050 FAM186BQ8IYM0 893 aa13.21□□□□□ -0.3
CBWD3-208ENST00000612050 OR6B3Q8NGW1 331 aa13.21□□□□□ -0.3
CBWD3-208ENST00000612050 FEZF2Q8TBJ5 459 aa13.21□□□□□ -0.3
CBWD3-208ENST00000612050 PARD3BQ8TEW8 1205 aa13.21□□□□□ -0.3
CBWD3-208ENST00000612050 PSMG2Q969U7 264 aa13.21□□□□□ -0.3
CBWD3-208ENST00000612050 FUBP3Q96I24 572 aaKnown RBP eCLIP13.21□□□□□ -0.3
CBWD3-208ENST00000612050 TMEM209Q96SK2 561 aa13.21□□□□□ -0.3
CBWD3-208ENST00000612050 IRF2BPLQ9H1B7 796 aa13.21□□□□□ -0.3
CBWD3-208ENST00000612050 DMAC2Q9NW81 257 aa13.21□□□□□ -0.3
CBWD3-208ENST00000612050 CEP72Q9P209 647 aa13.21□□□□□ -0.3
CBWD3-208ENST00000612050 UXTQ9UBK9 157 aaPredicted RBP13.21□□□□□ -0.3
CBWD3-208ENST00000612050 NXF1Q9UBU9 619 aaKnown RBP13.21□□□□□ -0.3
CBWD3-208ENST00000612050 ATP8B3O60423 1300 aa13.2□□□□□ -0.3
CBWD3-208ENST00000612050 PTPRJQ12913 1337 aa13.2□□□□□ -0.3
CBWD3-208ENST00000612050 DPYSL4O14531 572 aa13.2□□□□□ -0.3
CBWD3-208ENST00000612050 PSMA7O14818 248 aa13.2□□□□□ -0.3
CBWD3-208ENST00000612050 ECI2O75521 394 aa13.2□□□□□ -0.3
CBWD3-208ENST00000612050 STAU1O95793 577 aaKnown RBP13.2□□□□□ -0.3
CBWD3-208ENST00000612050 HAPLN1P10915 354 aaPredicted RBP13.2□□□□□ -0.3
CBWD3-208ENST00000612050 CEBPBP17676 345 aa13.2□□□□□ -0.3
CBWD3-208ENST00000612050 GNL1P36915 607 aaPredicted RBP13.2□□□□□ -0.3
CBWD3-208ENST00000612050 PIK3CAP42336 1068 aa13.2□□□□□ -0.3
CBWD3-208ENST00000612050 VAMP7P51809 220 aa13.2□□□□□ -0.3
CBWD3-208ENST00000612050 NUBP1P53384 320 aa13.2□□□□□ -0.3
CBWD3-208ENST00000612050 ENPEPQ07075 957 aa13.2□□□□□ -0.3
CBWD3-208ENST00000612050 NCOA4Q13772 614 aa13.2□□□□□ -0.3
CBWD3-208ENST00000612050 SOWAHAQ2M3V2 549 aa13.2□□□□□ -0.3
CBWD3-208ENST00000612050 SGSM1Q2NKQ1 1148 aa13.2□□□□□ -0.3
CBWD3-208ENST00000612050 DNAJB7Q7Z6W7 309 aaPredicted RBP13.2□□□□□ -0.3
CBWD3-208ENST00000612050 YAF2Q8IY57 180 aa13.2□□□□□ -0.3
CBWD3-208ENST00000612050 ELOA2Q8IYF1 753 aaPredicted RBP13.2□□□□□ -0.3
CBWD3-208ENST00000612050 SIX5Q8N196 739 aa13.2□□□□□ -0.3
CBWD3-208ENST00000612050 FLCNQ8NFG4 579 aa13.2□□□□□ -0.3
CBWD3-208ENST00000612050 RSAD2Q8WXG1 361 aa13.2□□□□□ -0.3
CBWD3-208ENST00000612050 TAF4BQ92750 862 aa13.2□□□□□ -0.3
CBWD3-208ENST00000612050 ELSPBP1Q96BH3 223 aa13.2□□□□□ -0.3
CBWD3-208ENST00000612050 ASIC4Q96FT7 647 aa13.2□□□□□ -0.3
CBWD3-208ENST00000612050 SYT15Q9BQS2 421 aa13.2□□□□□ -0.3
CBWD3-208ENST00000612050 PI4K2AQ9BTU6 479 aa13.2□□□□□ -0.3
CBWD3-208ENST00000612050 ATXN3LQ9H3M9 355 aa13.2□□□□□ -0.3
CBWD3-208ENST00000612050 MAGEC2Q9UBF1 373 aaPredicted RBP13.2□□□□□ -0.3
CBWD3-208ENST00000612050 DOCK8Q8NF50 2099 aa13.19□□□□□ -0.3
CBWD3-208ENST00000612050 A0A1W2PRU2 124 aa13.19□□□□□ -0.3
CBWD3-208ENST00000612050 LRRIQ3A6PVS8 624 aaPredicted RBP13.19□□□□□ -0.3
CBWD3-208ENST00000612050 TACC1O75410 805 aa13.19□□□□□ -0.3
CBWD3-208ENST00000612050 WARSP23381 471 aaKnown RBP13.19□□□□□ -0.3
CBWD3-208ENST00000612050 ACAT1P24752 427 aaKnown RBP13.19□□□□□ -0.3
CBWD3-208ENST00000612050 GABRR2P28476 465 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms