RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 BMP8AQ7Z5Y6 402 aa14.36□□□□□ -0.11
SENP3-209ENST00000610454 ENGASEQ8NFI3 743 aa14.36□□□□□ -0.11
SENP3-209ENST00000610454 PARD3BQ8TEW8 1205 aa14.36□□□□□ -0.11
SENP3-209ENST00000610454 MCRS1Q96EZ8 462 aa14.36□□□□□ -0.11
SENP3-209ENST00000610454 GCNAQ96QF7 691 aa14.36□□□□□ -0.11
SENP3-209ENST00000610454 TSG101Q99816 390 aa14.36□□□□□ -0.11
SENP3-209ENST00000610454 RTP3Q9BQQ7 232 aa14.36□□□□□ -0.11
SENP3-209ENST00000610454 SNX25Q9H3E2 840 aa14.36□□□□□ -0.11
SENP3-209ENST00000610454 SMOC2Q9H3U7 446 aa14.36□□□□□ -0.11
SENP3-209ENST00000610454 CEP72Q9P209 647 aa14.36□□□□□ -0.11
SENP3-209ENST00000610454 LRRIQ3A6PVS8 624 aaPredicted RBP14.35□□□□□ -0.11
SENP3-209ENST00000610454 ANHXE9PGG2 379 aa14.35□□□□□ -0.11
SENP3-209ENST00000610454 MICAL2O94851 1124 aa14.35□□□□□ -0.11
SENP3-209ENST00000610454 VNN2O95498 520 aa14.35□□□□□ -0.11
SENP3-209ENST00000610454 SRFP11831 508 aa14.35□□□□□ -0.11
SENP3-209ENST00000610454 CEBPBP17676 345 aa14.35□□□□□ -0.11
SENP3-209ENST00000610454 ACAT1P24752 427 aaKnown RBP14.35□□□□□ -0.11
SENP3-209ENST00000610454 ATICP31939 592 aa14.35□□□□□ -0.11
SENP3-209ENST00000610454 CDR1P51861 262 aa14.35□□□□□ -0.11
SENP3-209ENST00000610454 ADAM9Q13443 819 aa14.35□□□□□ -0.11
SENP3-209ENST00000610454 NFIL3Q16649 462 aa14.35□□□□□ -0.11
SENP3-209ENST00000610454 SOWAHAQ2M3V2 549 aa14.35□□□□□ -0.11
SENP3-209ENST00000610454 ZNF699Q32M78 642 aa14.35□□□□□ -0.11
SENP3-209ENST00000610454 WDR72Q3MJ13 1102 aa14.35□□□□□ -0.11
SENP3-209ENST00000610454 INTS6LQ5JSJ4 861 aaKnown RBP14.35□□□□□ -0.11
SENP3-209ENST00000610454 ZNF658Q5TYW1 1059 aaPredicted RBP14.35□□□□□ -0.11
SENP3-209ENST00000610454 INTS8Q75QN2 995 aaKnown RBP14.35□□□□□ -0.11
SENP3-209ENST00000610454 SPATA2LQ8IUW3 424 aaPredicted RBP14.35□□□□□ -0.11
SENP3-209ENST00000610454 FAM186BQ8IYM0 893 aa14.35□□□□□ -0.11
SENP3-209ENST00000610454 SMYD4Q8IYR2 804 aaPredicted RBP14.35□□□□□ -0.11
SENP3-209ENST00000610454 HS6ST3Q8IZP7 471 aa14.35□□□□□ -0.11
SENP3-209ENST00000610454 SLC44A3Q8N4M1 653 aa14.35□□□□□ -0.11
SENP3-209ENST00000610454 FBXL6Q8N531 539 aa14.35□□□□□ -0.11
SENP3-209ENST00000610454 TTC9BQ8N6N2 239 aa14.35□□□□□ -0.11
SENP3-209ENST00000610454 TMC2Q8TDI7 906 aa14.35□□□□□ -0.11
SENP3-209ENST00000610454 ASIC4Q96FT7 647 aa14.35□□□□□ -0.11
SENP3-209ENST00000610454 CRISPLD1Q9H336 500 aa14.35□□□□□ -0.11
SENP3-209ENST00000610454 NXF1Q9UBU9 619 aaKnown RBP14.35□□□□□ -0.11
SENP3-209ENST00000610454 MAPK13O15264 365 aa14.34□□□□□ -0.11
SENP3-209ENST00000610454 SOAT2O75908 522 aa14.34□□□□□ -0.11
SENP3-209ENST00000610454 CST3P01034 146 aaPredicted RBP14.34□□□□□ -0.11
SENP3-209ENST00000610454 CFHP08603 1231 aa14.34□□□□□ -0.11
SENP3-209ENST00000610454 HAPLN1P10915 354 aaPredicted RBP14.34□□□□□ -0.11
SENP3-209ENST00000610454 P4HA1P13674 534 aa14.34□□□□□ -0.11
SENP3-209ENST00000610454 PSMC2P35998 433 aaKnown RBP14.34□□□□□ -0.11
SENP3-209ENST00000610454 VAMP7P51809 220 aa14.34□□□□□ -0.11
SENP3-209ENST00000610454 MYL6P60660 151 aa14.34□□□□□ -0.11
SENP3-209ENST00000610454 NCOA4Q13772 614 aa14.34□□□□□ -0.11
SENP3-209ENST00000610454 MAPRE1Q15691 268 aaKnown RBP14.34□□□□□ -0.11
SENP3-209ENST00000610454 EDRF1Q3B7T1 1238 aa14.34□□□□□ -0.11
SENP3-209ENST00000610454 ZNF667Q5HYK9 610 aa14.34□□□□□ -0.11
SENP3-209ENST00000610454 PRSS36Q5K4E3 855 aa14.34□□□□□ -0.11
SENP3-209ENST00000610454 TDRD10Q5VZ19 366 aaKnown RBP14.34□□□□□ -0.11
SENP3-209ENST00000610454 PARM1Q6UWI2 310 aa14.34□□□□□ -0.11
SENP3-209ENST00000610454 C4orf50Q6ZRC1 276 aa14.34□□□□□ -0.11
SENP3-209ENST00000610454 LRRTM3Q86VH5 581 aa14.34□□□□□ -0.11
SENP3-209ENST00000610454 ST13P5Q8NFI4 369 aaPredicted RBP14.34□□□□□ -0.11
SENP3-209ENST00000610454 OR6B3Q8NGW1 331 aa14.34□□□□□ -0.11
SENP3-209ENST00000610454 ZNF516Q92618 1163 aa14.34□□□□□ -0.11
SENP3-209ENST00000610454 FGF14Q92915 247 aa14.34□□□□□ -0.11
SENP3-209ENST00000610454 PSMG2Q969U7 264 aa14.34□□□□□ -0.11
SENP3-209ENST00000610454 TCEAL4Q96EI5 215 aa14.34□□□□□ -0.11
SENP3-209ENST00000610454 KXD1Q9BQD3 176 aa14.34□□□□□ -0.11
SENP3-209ENST00000610454 SYT15Q9BQS2 421 aa14.34□□□□□ -0.11
SENP3-209ENST00000610454 PI4K2AQ9BTU6 479 aa14.34□□□□□ -0.11
SENP3-209ENST00000610454 IMPG2Q9BZV3 1241 aa14.34□□□□□ -0.11
SENP3-209ENST00000610454 GPR88Q9GZN0 384 aa14.34□□□□□ -0.11
SENP3-209ENST00000610454 GTF3C4Q9UKN8 822 aa14.34□□□□□ -0.11
SENP3-209ENST00000610454 CDH9Q9ULB4 789 aa14.34□□□□□ -0.11
SENP3-209ENST00000610454 PCDHA5Q9Y5H7 936 aa14.34□□□□□ -0.11
SENP3-209ENST00000610454 A0A1W2PRU2 124 aa14.33□□□□□ -0.12
SENP3-209ENST00000610454 STK25O00506 426 aa14.33□□□□□ -0.12
SENP3-209ENST00000610454 GABRDO14764 452 aa14.33□□□□□ -0.12
SENP3-209ENST00000610454 PSMA7O14818 248 aa14.33□□□□□ -0.12
SENP3-209ENST00000610454 IKBKBO14920 756 aa14.33□□□□□ -0.12
SENP3-209ENST00000610454 CETN3O15182 167 aa14.33□□□□□ -0.12
SENP3-209ENST00000610454 NARSO43776 548 aaKnown RBP14.33□□□□□ -0.12
SENP3-209ENST00000610454 STAU1O95793 577 aaKnown RBP14.33□□□□□ -0.12
SENP3-209ENST00000610454 EPB41P11171 864 aaKnown RBP14.33□□□□□ -0.12
SENP3-209ENST00000610454 WARSP23381 471 aaKnown RBP14.33□□□□□ -0.12
SENP3-209ENST00000610454 PIK3CAP42336 1068 aa14.33□□□□□ -0.12
SENP3-209ENST00000610454 EPHA5P54756 1037 aa14.33□□□□□ -0.12
SENP3-209ENST00000610454 RPL10AP62906 217 aaKnown RBP14.33□□□□□ -0.12
SENP3-209ENST00000610454 CLDN10P78369 228 aa14.33□□□□□ -0.12
SENP3-209ENST00000610454 ARHGAP15Q53QZ3 475 aa14.33□□□□□ -0.12
SENP3-209ENST00000610454 SCARA3Q6AZY7 606 aa14.33□□□□□ -0.12
SENP3-209ENST00000610454 DNAJB7Q7Z6W7 309 aaPredicted RBP14.33□□□□□ -0.12
SENP3-209ENST00000610454 OSTM1Q86WC4 334 aa14.33□□□□□ -0.12
SENP3-209ENST00000610454 ELOA2Q8IYF1 753 aaPredicted RBP14.33□□□□□ -0.12
SENP3-209ENST00000610454 GIPC2Q8TF65 315 aa14.33□□□□□ -0.12
SENP3-209ENST00000610454 ERCC4Q92889 916 aaPredicted RBP14.33□□□□□ -0.12
SENP3-209ENST00000610454 LPIN3Q9BQK8 851 aa14.33□□□□□ -0.12
SENP3-209ENST00000610454 DNAJC25Q9H1X3 360 aa14.33□□□□□ -0.12
SENP3-209ENST00000610454 ATXN3LQ9H3M9 355 aa14.33□□□□□ -0.12
SENP3-209ENST00000610454 ZFP14Q9HCL3 533 aa14.33□□□□□ -0.12
SENP3-209ENST00000610454 ABCB6Q9NP58 842 aa14.33□□□□□ -0.12
SENP3-209ENST00000610454 ZDBF2Q9HCK1 2354 aa14.32□□□□□ -0.12
SENP3-209ENST00000610454 TACC1O75410 805 aa14.32□□□□□ -0.12
SENP3-209ENST00000610454 AKAP3O75969 853 aa14.32□□□□□ -0.12
SENP3-209ENST00000610454 PDGFRBP09619 1106 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms