RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 CHSY1Q86X52 802 aa13.63□□□□□ -0.23
USP6NL-205ENST00000609104 TUBGCP3Q96CW5 907 aa13.63□□□□□ -0.23
USP6NL-205ENST00000609104 CHORDC1Q9UHD1 332 aaPredicted RBP13.63□□□□□ -0.23
USP6NL-205ENST00000609104 SLC39A10Q9ULF5 831 aa13.63□□□□□ -0.23
USP6NL-205ENST00000609104 FHOD1Q9Y613 1164 aa13.63□□□□□ -0.23
USP6NL-205ENST00000609104 TPST1O60507 370 aa13.63□□□□□ -0.23
USP6NL-205ENST00000609104 APOBEC3FQ8IUX4 373 aaKnown RBP13.63□□□□□ -0.23
USP6NL-205ENST00000609104 THUMPD3Q9BV44 507 aaKnown RBP13.63□□□□□ -0.23
USP6NL-205ENST00000609104 WDR35Q9P2L0 1181 aa13.63□□□□□ -0.23
USP6NL-205ENST00000609104 SOX13Q9UN79 622 aa13.63□□□□□ -0.23
USP6NL-205ENST00000609104 RALBP11234 206 aa13.62□□□□□ -0.23
USP6NL-205ENST00000609104 AKR1B1P15121 316 aa13.62□□□□□ -0.23
USP6NL-205ENST00000609104 RBBP8NLQ8NC74 664 aaPredicted RBP13.62□□□□□ -0.23
USP6NL-205ENST00000609104 ERP44Q9BS26 406 aa13.62□□□□□ -0.23
USP6NL-205ENST00000609104 SPATA16Q9BXB7 569 aa13.62□□□□□ -0.23
USP6NL-205ENST00000609104 CATSPERBQ9H7T0 1116 aa13.62□□□□□ -0.23
USP6NL-205ENST00000609104 NOD2Q9HC29 1040 aa13.62□□□□□ -0.23
USP6NL-205ENST00000609104 ZDHHC9Q9Y397 364 aa13.62□□□□□ -0.23
USP6NL-205ENST00000609104 ZFYVE16Q7Z3T8 1539 aa13.62□□□□□ -0.23
USP6NL-205ENST00000609104 TNPO2O14787 897 aaKnown RBP13.62□□□□□ -0.23
USP6NL-205ENST00000609104 COPAP53621 1224 aa13.62□□□□□ -0.23
USP6NL-205ENST00000609104 SGSM1Q2NKQ1 1148 aa13.62□□□□□ -0.23
USP6NL-205ENST00000609104 GPR141Q7Z602 305 aa13.62□□□□□ -0.23
USP6NL-205ENST00000609104 HAO1Q9UJM8 370 aa13.62□□□□□ -0.23
USP6NL-205ENST00000609104 RHOBTB1O94844 696 aa13.62□□□□□ -0.23
USP6NL-205ENST00000609104 IGKV5-2P06315 115 aa13.62□□□□□ -0.23
USP6NL-205ENST00000609104 GEMIN4P57678 1058 aaKnown RBP13.62□□□□□ -0.23
USP6NL-205ENST00000609104 LDHDQ86WU2 507 aa13.62□□□□□ -0.23
USP6NL-205ENST00000609104 POU4F1Q01851 419 aa13.62□□□□□ -0.23
USP6NL-205ENST00000609104 PDIA5Q14554 519 aa13.62□□□□□ -0.23
USP6NL-205ENST00000609104 ZC2HC1CQ53FD0 456 aaPredicted RBP13.62□□□□□ -0.23
USP6NL-205ENST00000609104 ACSF2Q96CM8 615 aaPredicted RBP13.62□□□□□ -0.23
USP6NL-205ENST00000609104 EPB42P16452 691 aa13.62□□□□□ -0.23
USP6NL-205ENST00000609104 RXRBP28702 533 aa13.62□□□□□ -0.23
USP6NL-205ENST00000609104 ARL4DP49703 201 aa13.62□□□□□ -0.23
USP6NL-205ENST00000609104 ZCWPW2Q504Y3 356 aa13.62□□□□□ -0.23
USP6NL-205ENST00000609104 MFSD14CQ5VZR4 134 aa13.62□□□□□ -0.23
USP6NL-205ENST00000609104 SH3GL1Q99961 368 aa13.62□□□□□ -0.23
USP6NL-205ENST00000609104 NLRP1Q9C000 1473 aa13.62□□□□□ -0.23
USP6NL-205ENST00000609104 PSMA4P25789 261 aaKnown RBP13.62□□□□□ -0.23
USP6NL-205ENST00000609104 ISCUQ9H1K1 167 aa13.62□□□□□ -0.23
USP6NL-205ENST00000609104 MYMKA6NI61 221 aa13.62□□□□□ -0.23
USP6NL-205ENST00000609104 TP53BP2Q13625 1128 aa13.62□□□□□ -0.23
USP6NL-205ENST00000609104 GOLGA7BQ2TAP0 167 aa13.62□□□□□ -0.23
USP6NL-205ENST00000609104 BRD2P25440 801 aaKnown RBP13.62□□□□□ -0.23
USP6NL-205ENST00000609104 MRPS35P82673 323 aaKnown RBP13.62□□□□□ -0.23
USP6NL-205ENST00000609104 SSU72P8A0A1W2PR75 194 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 UBXN8O00124 270 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 CST8O60676 142 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 TFB1MQ8WVM0 346 aaKnown RBP13.61□□□□□ -0.23
USP6NL-205ENST00000609104 KIF2CQ99661 725 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 TIPINQ9BVW5 301 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 KCTD10Q9H3F6 313 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 PIM2Q9P1W9 311 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 HEY2Q9UBP5 337 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 OVGP1Q12889 678 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 CLEC4GQ6UXB4 293 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 SETD3Q86TU7 594 aaPredicted RBP13.61□□□□□ -0.23
USP6NL-205ENST00000609104 RUVBL2Q9Y230 463 aaKnown RBP13.61□□□□□ -0.23
USP6NL-205ENST00000609104 ZCCHC18P0CG32 403 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 MIER2Q8N344 545 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 CELF1Q92879 486 aaKnown RBP13.61□□□□□ -0.23
USP6NL-205ENST00000609104 HSD17B3P37058 310 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 HEATR4Q86WZ0 1026 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 PGBD3Q8N328 593 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 SEPT5Q99719 369 aaPredicted RBP13.61□□□□□ -0.23
USP6NL-205ENST00000609104 TFE3P19532 575 aaPredicted RBP13.61□□□□□ -0.23
USP6NL-205ENST00000609104 SLC44A4Q53GD3 710 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 BNIPLQ7Z465 357 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 DDHD1Q8NEL9 900 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.61□□□□□ -0.23
USP6NL-205ENST00000609104 KRT35Q92764 455 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 CCSER1Q9C0I3 900 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 ZNF521Q96K83 1311 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 CTCFP49711 727 aaPredicted RBP13.61□□□□□ -0.23
USP6NL-205ENST00000609104 PSMD7P51665 324 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 NME5P56597 212 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 LAMC2Q13753 1193 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 GJB7Q6PEY0 223 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 SESN1Q9Y6P5 492 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 ARHGAP31Q2M1Z3 1444 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 KPNB1Q14974 876 aaKnown RBP13.61□□□□□ -0.23
USP6NL-205ENST00000609104 ALX1Q15699 326 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 CDC42BPBQ9Y5S2 1711 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 GTF2H1P32780 548 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 GALNTL6Q49A17 601 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 KCTD17Q8N5Z5 321 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 FEZF2Q8TBJ5 459 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 CALML6Q8TD86 181 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 PDLIM2Q96JY6 352 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 PSMC3P17980 439 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 TRIM25Q14258 630 aaKnown RBP13.61□□□□□ -0.23
USP6NL-205ENST00000609104 GPAT2Q6NUI2 795 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 ANKRD49Q8WVL7 239 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 MRGBPQ9NV56 204 aa13.61□□□□□ -0.23
USP6NL-205ENST00000609104 TXNP10599 105 aaKnown RBP13.6□□□□□ -0.23
USP6NL-205ENST00000609104 PPCSQ9HAB8 311 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 FAM153AQ9UHL3 310 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 MAGEA13PA6NCF6 341 aa13.6□□□□□ -0.23
USP6NL-205ENST00000609104 PRRG1O14668 218 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms