RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 USP49Q70CQ1 688 aa4.85□□□□□ -1.63
AC004542.1-201ENST00000602955 RSRC2Q7L4I2 434 aaKnown RBP4.85□□□□□ -1.63
AC004542.1-201ENST00000602955 DOK3Q7L591 496 aa4.85□□□□□ -1.63
AC004542.1-201ENST00000602955 RALYLQ86SE5 291 aaKnown RBP4.85□□□□□ -1.63
AC004542.1-201ENST00000602955 LRRTM4Q86VH4 590 aa4.85□□□□□ -1.63
AC004542.1-201ENST00000602955 FBXO15Q8NCQ5 510 aaPredicted RBP4.85□□□□□ -1.63
AC004542.1-201ENST00000602955 TMIEQ8NEW7 156 aa4.85□□□□□ -1.63
AC004542.1-201ENST00000602955 SLC30A5Q8TAD4 765 aa4.85□□□□□ -1.63
AC004542.1-201ENST00000602955 PWWP2AQ96N64 755 aa4.85□□□□□ -1.63
AC004542.1-201ENST00000602955 KLHL32Q96NJ5 620 aa4.85□□□□□ -1.63
AC004542.1-201ENST00000602955 MOGAT1Q96PD6 335 aa4.85□□□□□ -1.63
AC004542.1-201ENST00000602955 PPP1R9BQ96SB3 815 aa4.85□□□□□ -1.63
AC004542.1-201ENST00000602955 PRPF18Q99633 342 aaKnown RBP4.85□□□□□ -1.63
AC004542.1-201ENST00000602955 CNPPD1Q9BV87 410 aa4.85□□□□□ -1.63
AC004542.1-201ENST00000602955 CPEB1Q9BZB8 566 aaKnown RBP4.85□□□□□ -1.63
AC004542.1-201ENST00000602955 PCDHAC1Q9H158 963 aa4.85□□□□□ -1.63
AC004542.1-201ENST00000602955 TMX4Q9H1E5 349 aaPredicted RBP4.85□□□□□ -1.63
AC004542.1-201ENST00000602955 MSL2Q9HCI7 577 aa4.85□□□□□ -1.63
AC004542.1-201ENST00000602955 SAYSD1Q9NPB0 183 aa4.85□□□□□ -1.63
AC004542.1-201ENST00000602955 WASH6PQ9NQA3 447 aa4.85□□□□□ -1.63
AC004542.1-201ENST00000602955 DKK4Q9UBT3 224 aa4.85□□□□□ -1.63
AC004542.1-201ENST00000602955 HERC5Q9UII4 1024 aaKnown RBP4.85□□□□□ -1.63
AC004542.1-201ENST00000602955 CA14Q9ULX7 337 aa4.85□□□□□ -1.63
AC004542.1-201ENST00000602955 TMEM98Q9Y2Y6 226 aa4.85□□□□□ -1.63
AC004542.1-201ENST00000602955 E9PLN8 166 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 RAB27BO00194 218 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 MATN2O00339 956 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 KIF20AO95235 890 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 CST5P28325 142 aaPredicted RBP4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 ADD2P35612 726 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 CPT1AP50416 773 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 PNLIPRP1P54315 467 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 EIF5P55010 431 aaKnown RBP4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 RAP2BP61225 183 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 RIN1Q13671 783 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 ARHGEF7Q14155 803 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 FAM110CQ1W6H9 321 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 RNF151Q2KHN1 245 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 TRIM71Q2Q1W2 868 aaKnown RBP4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 FAM214AQ32MH5 1076 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 ADCK5Q3MIX3 580 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 ZNF568Q3ZCX4 644 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 TMTC4Q5T4D3 741 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 PLAG1Q6DJT9 500 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 MRNIPQ6NTE8 343 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 CRTC1Q6UUV9 634 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 TMTC1Q8IUR5 882 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 FITM2Q8N6M3 262 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 SLC17A8Q8NDX2 589 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 SIMC1Q8NDZ2 872 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 ZFP28Q8NHY6 868 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 ASB12Q8WXK4 309 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 RAPGEF4Q8WZA2 1011 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 LCORQ96JN0 433 aaPredicted RBP4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 SEC62Q99442 399 aaKnown RBP4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 TCF25Q9BQ70 676 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 VKORC1Q9BQB6 163 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 MESP1Q9BRJ9 268 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 PYM1Q9BRP8 204 aaKnown RBP4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 DDX23Q9BUQ8 820 aaKnown RBP4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 FAM83DQ9H4H8 585 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 MLXIPQ9HAP2 919 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 VPS45Q9NRW7 570 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 RASSF1Q9NS23 344 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 GGA3Q9NZ52 723 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 KIF17Q9P2E2 1029 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 IFT80Q9P2H3 777 aaPredicted RBP4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 HESX1Q9UBX0 185 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 SLC13A4Q9UKG4 626 aa4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 ZMYND8Q9ULU4 1186 aaPredicted RBP4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 MTO1Q9Y2Z2 717 aaKnown RBP4.84□□□□□ -1.63
AC004542.1-201ENST00000602955 CDHR4A6H8M9 788 aa4.83□□□□□ -1.64
AC004542.1-201ENST00000602955 ADAM23O75077 832 aa4.83□□□□□ -1.64
AC004542.1-201ENST00000602955 STC2O76061 302 aa4.83□□□□□ -1.64
AC004542.1-201ENST00000602955 MBD4O95243 580 aa4.83□□□□□ -1.64
AC004542.1-201ENST00000602955 GLP2RO95838 553 aa4.83□□□□□ -1.64
AC004542.1-201ENST00000602955 LDHCP07864 332 aa4.83□□□□□ -1.64
AC004542.1-201ENST00000602955 HSP90AA1P07900 732 aaKnown RBP4.83□□□□□ -1.64
AC004542.1-201ENST00000602955 TPH1P17752 444 aa4.83□□□□□ -1.64
AC004542.1-201ENST00000602955 SLC5A2P31639 672 aa4.83□□□□□ -1.64
AC004542.1-201ENST00000602955 NSUN2Q08J23 767 aaKnown RBP eCLIP4.83□□□□□ -1.64
AC004542.1-201ENST00000602955 MLANAQ16655 118 aa4.83□□□□□ -1.64
AC004542.1-201ENST00000602955 INSCQ1MX18 579 aa4.83□□□□□ -1.64
AC004542.1-201ENST00000602955 PLA1AQ53H76 456 aa4.83□□□□□ -1.64
AC004542.1-201ENST00000602955 ARTNQ5T4W7 220 aa4.83□□□□□ -1.64
AC004542.1-201ENST00000602955 ATXN7L2Q5T6C5 722 aaPredicted RBP4.83□□□□□ -1.64
AC004542.1-201ENST00000602955 FAXCQ5TGI0 409 aa4.83□□□□□ -1.64
AC004542.1-201ENST00000602955 RAP1GAP2Q684P5 730 aa4.83□□□□□ -1.64
AC004542.1-201ENST00000602955 MCTP2Q6DN12 878 aa4.83□□□□□ -1.64
AC004542.1-201ENST00000602955 KLHL17Q6TDP4 642 aa4.83□□□□□ -1.64
AC004542.1-201ENST00000602955 C1orf122Q6ZSJ8 110 aa4.83□□□□□ -1.64
AC004542.1-201ENST00000602955 GPRIN1Q7Z2K8 1008 aa4.83□□□□□ -1.64
AC004542.1-201ENST00000602955 HERC6Q8IVU3 1022 aa4.83□□□□□ -1.64
AC004542.1-201ENST00000602955 CCDC28AQ8IWP9 274 aa4.83□□□□□ -1.64
AC004542.1-201ENST00000602955 FTSJ3Q8IY81 847 aaKnown RBP4.83□□□□□ -1.64
AC004542.1-201ENST00000602955 CARFQ8N187 725 aa4.83□□□□□ -1.64
AC004542.1-201ENST00000602955 ESX1Q8N693 406 aa4.83□□□□□ -1.64
AC004542.1-201ENST00000602955 PDPRQ8NCN5 879 aa4.83□□□□□ -1.64
AC004542.1-201ENST00000602955 FAM46DQ8NEK8 389 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms