RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 TAP1Q03518 808 aa21.27■■□□□ 1
PNKP-214ENST00000600573 PTPROQ16827 1216 aa21.27■■□□□ 1
PNKP-214ENST00000600573 LIMS2Q7Z4I7 341 aa21.27■■□□□ 1
PNKP-214ENST00000600573 TOP6BLQ8N6T0 577 aa21.27■■□□□ 1
PNKP-214ENST00000600573 HEXIM2Q96MH2 286 aaKnown RBP21.27■■□□□ 1
PNKP-214ENST00000600573 ADAM2Q99965 735 aa21.27■■□□□ 1
PNKP-214ENST00000600573 ELOVL4Q9GZR5 314 aa21.27■■□□□ 1
PNKP-214ENST00000600573 CXCL16Q9H2A7 254 aa21.27■■□□□ 1
PNKP-214ENST00000600573 RGS18Q9NS28 235 aa21.27■■□□□ 1
PNKP-214ENST00000600573 RBM12Q9NTZ6 932 aaKnown RBP21.27■■□□□ 1
PNKP-214ENST00000600573 PARVAQ9NVD7 372 aa21.27■■□□□ 1
PNKP-214ENST00000600573 ALG6Q9Y672 507 aa21.27■■□□□ 1
PNKP-214ENST00000600573 FAM170AA1A519 330 aa21.26■□□□□ 0.99
PNKP-214ENST00000600573 ATMINO43313 823 aaPredicted RBP21.26■□□□□ 0.99
PNKP-214ENST00000600573 CALCAP01258 141 aa21.26■□□□□ 0.99
PNKP-214ENST00000600573 SELPP16109 830 aa21.26■□□□□ 0.99
PNKP-214ENST00000600573 SLC1A1P43005 524 aa21.26■□□□□ 0.99
PNKP-214ENST00000600573 GLE1Q53GS7 698 aaKnown RBP21.26■□□□□ 0.99
PNKP-214ENST00000600573 PLEKHA7Q6IQ23 1121 aa21.26■□□□□ 0.99
PNKP-214ENST00000600573 TRAF7Q6Q0C0 670 aa21.26■□□□□ 0.99
PNKP-214ENST00000600573 TFAP2BQ92481 460 aa21.26■□□□□ 0.99
PNKP-214ENST00000600573 DDX27Q96GQ7 796 aaKnown RBP21.26■□□□□ 0.99
PNKP-214ENST00000600573 RNF208Q9H0X6 261 aa21.26■□□□□ 0.99
PNKP-214ENST00000600573 WNT8AQ9H1J5 351 aa21.26■□□□□ 0.99
PNKP-214ENST00000600573 TSPYL2Q9H2G4 693 aaPredicted RBP21.26■□□□□ 0.99
PNKP-214ENST00000600573 WDR35Q9P2L0 1181 aa21.26■□□□□ 0.99
PNKP-214ENST00000600573 DDX3YO15523 660 aaKnown RBP21.26■□□□□ 0.99
PNKP-214ENST00000600573 HUS1O60921 280 aa21.26■□□□□ 0.99
PNKP-214ENST00000600573 COL6A1P12109 1028 aa21.26■□□□□ 0.99
PNKP-214ENST00000600573 CCL5P13501 91 aa21.26■□□□□ 0.99
PNKP-214ENST00000600573 C8orf74Q6P047 294 aa21.26■□□□□ 0.99
PNKP-214ENST00000600573 AGMOQ6ZNB7 445 aa21.26■□□□□ 0.99
PNKP-214ENST00000600573 ERICH1Q86X53 443 aa21.26■□□□□ 0.99
PNKP-214ENST00000600573 RASGEF1CQ8N431 466 aa21.26■□□□□ 0.99
PNKP-214ENST00000600573 UBL4BQ8N7F7 174 aa21.26■□□□□ 0.99
PNKP-214ENST00000600573 APPL2Q8NEU8 664 aa21.26■□□□□ 0.99
PNKP-214ENST00000600573 DEFB118Q96PH6 123 aa21.26■□□□□ 0.99
PNKP-214ENST00000600573 GAD1Q99259 594 aa21.26■□□□□ 0.99
PNKP-214ENST00000600573 RSAD1Q9HA92 442 aa21.26■□□□□ 0.99
PNKP-214ENST00000600573 ARL5CA6NH57 179 aa21.25■□□□□ 0.99
PNKP-214ENST00000600573 MYO1FO00160 1098 aa21.25■□□□□ 0.99
PNKP-214ENST00000600573 PITPNM1O00562 1244 aa21.25■□□□□ 0.99
PNKP-214ENST00000600573 INPPL1O15357 1258 aa21.25■□□□□ 0.99
PNKP-214ENST00000600573 SEC31AO94979 1220 aaKnown RBP21.25■□□□□ 0.99
PNKP-214ENST00000600573 PARNO95453 639 aaKnown RBP21.25■□□□□ 0.99
PNKP-214ENST00000600573 RRM1P23921 792 aa21.25■□□□□ 0.99
PNKP-214ENST00000600573 SNX16P57768 344 aa21.25■□□□□ 0.99
PNKP-214ENST00000600573 LILRA4P59901 499 aa21.25■□□□□ 0.99
PNKP-214ENST00000600573 PTP4A2Q12974 167 aa21.25■□□□□ 0.99
PNKP-214ENST00000600573 LONRF2Q1L5Z9 754 aa21.25■□□□□ 0.99
PNKP-214ENST00000600573 MAP9Q49MG5 647 aa21.25■□□□□ 0.99
PNKP-214ENST00000600573 LCLAT1Q6UWP7 414 aa21.25■□□□□ 0.99
PNKP-214ENST00000600573 PASD1Q8IV76 773 aa21.25■□□□□ 0.99
PNKP-214ENST00000600573 FAM126BQ8IXS8 530 aa21.25■□□□□ 0.99
PNKP-214ENST00000600573 GSTCDQ8NEC7 633 aa21.25■□□□□ 0.99
PNKP-214ENST00000600573 ZSWIM1Q9BR11 485 aa21.25■□□□□ 0.99
PNKP-214ENST00000600573 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.25■□□□□ 0.993e-9■■■□□ 18.5
PNKP-214ENST00000600573 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.25■□□□□ 0.993e-6■■■■□ 21.1
PNKP-214ENST00000600573 TMEM110-MUSTN1A8MSY1 372 aa21.24■□□□□ 0.99
PNKP-214ENST00000600573 CFHP08603 1231 aa21.24■□□□□ 0.99
PNKP-214ENST00000600573 MLH1P40692 756 aa21.24■□□□□ 0.99
PNKP-214ENST00000600573 GSCP56915 257 aaPredicted RBP21.24■□□□□ 0.99
PNKP-214ENST00000600573 FAM189BP81408 668 aa21.24■□□□□ 0.99
PNKP-214ENST00000600573 SOWAHAQ2M3V2 549 aa21.24■□□□□ 0.99
PNKP-214ENST00000600573 SLC24A5Q71RS6 500 aa21.24■□□□□ 0.99
PNKP-214ENST00000600573 LRRC8DQ7L1W4 858 aa21.24■□□□□ 0.99
PNKP-214ENST00000600573 ECHDC2Q86YB7 292 aa21.24■□□□□ 0.99
PNKP-214ENST00000600573 CRYBG2Q8N1P7 616 aa21.24■□□□□ 0.99
PNKP-214ENST00000600573 UROC1Q96N76 676 aa21.24■□□□□ 0.99
PNKP-214ENST00000600573 TWNKQ96RR1 684 aa21.24■□□□□ 0.99
PNKP-214ENST00000600573 C11orf70Q9BRQ4 267 aa21.24■□□□□ 0.99
PNKP-214ENST00000600573 CARD9Q9H257 536 aa21.24■□□□□ 0.99
PNKP-214ENST00000600573 SNX25Q9H3E2 840 aa21.24■□□□□ 0.99
PNKP-214ENST00000600573 CCDC66A2RUB6 948 aa21.23■□□□□ 0.99
PNKP-214ENST00000600573 O00370 1275 aa21.23■□□□□ 0.99
PNKP-214ENST00000600573 PPEF2O14830 753 aa21.23■□□□□ 0.99
PNKP-214ENST00000600573 MGEA5O60502 916 aa21.23■□□□□ 0.99
PNKP-214ENST00000600573 SETSIPP0DME0 302 aa21.23■□□□□ 0.99
PNKP-214ENST00000600573 CAPN2P17655 700 aa21.23■□□□□ 0.99
PNKP-214ENST00000600573 GNL1P36915 607 aaPredicted RBP21.23■□□□□ 0.99
PNKP-214ENST00000600573 SOX4Q06945 474 aaPredicted RBP21.23■□□□□ 0.99
PNKP-214ENST00000600573 MESDQ14696 234 aa21.23■□□□□ 0.99
PNKP-214ENST00000600573 MMS22LQ6ZRQ5 1243 aa21.23■□□□□ 0.99
PNKP-214ENST00000600573 WDTC1Q8N5D0 677 aa21.23■□□□□ 0.99
PNKP-214ENST00000600573 C1orf131Q8NDD1 294 aaKnown RBP21.23■□□□□ 0.99
PNKP-214ENST00000600573 OR6B3Q8NGW1 331 aa21.23■□□□□ 0.99
PNKP-214ENST00000600573 SPATA18Q8TC71 538 aa21.23■□□□□ 0.99
PNKP-214ENST00000600573 ZFP42Q96MM3 310 aa21.23■□□□□ 0.99
PNKP-214ENST00000600573 OGFRQ9NZT2 677 aa21.23■□□□□ 0.99
PNKP-214ENST00000600573 TTC7AQ9ULT0 858 aaPredicted RBP21.23■□□□□ 0.99
PNKP-214ENST00000600573 TRIP11Q15643 1979 aa21.23■□□□□ 0.99
PNKP-214ENST00000600573 WARSP23381 471 aaKnown RBP21.22■□□□□ 0.99
PNKP-214ENST00000600573 GRIK3Q13003 919 aa21.22■□□□□ 0.99
PNKP-214ENST00000600573 MAMLD1Q13495 774 aa21.22■□□□□ 0.99
PNKP-214ENST00000600573 ARHGAP17Q68EM7 881 aa21.22■□□□□ 0.99
PNKP-214ENST00000600573 ZNF598Q86UK7 904 aaKnown RBP21.22■□□□□ 0.99
PNKP-214ENST00000600573 TMEM86AQ8N2M4 240 aa21.22■□□□□ 0.99
PNKP-214ENST00000600573 FEZF2Q8TBJ5 459 aa21.22■□□□□ 0.99
PNKP-214ENST00000600573 TNIP3Q96KP6 325 aa21.22■□□□□ 0.99
PNKP-214ENST00000600573 NAP1L3Q99457 506 aaPredicted RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms