RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 ZNF568Q3ZCX4 644 aa10.33□□□□□ -0.76
NFKB1-212ENST00000600343 RABGAP1LQ5R372 815 aa10.33□□□□□ -0.76
NFKB1-212ENST00000600343 CYFIP1Q7L576 1253 aa10.33□□□□□ -0.76
NFKB1-212ENST00000600343 LSMEM1Q8N8F7 131 aa10.33□□□□□ -0.76
NFKB1-212ENST00000600343 HCAR2Q8TDS4 363 aa10.33□□□□□ -0.76
NFKB1-212ENST00000600343 RPGRQ92834 1020 aaKnown RBP10.33□□□□□ -0.76
NFKB1-212ENST00000600343 DCUN1D1Q96GG9 259 aa10.33□□□□□ -0.76
NFKB1-212ENST00000600343 CSRNP1Q96S65 589 aa10.33□□□□□ -0.76
NFKB1-212ENST00000600343 FERMT1Q9BQL6 677 aa10.33□□□□□ -0.76
NFKB1-212ENST00000600343 SEMA6BQ9H3T3 888 aa10.33□□□□□ -0.76
NFKB1-212ENST00000600343 ARHGEF4Q9NR80 690 aa10.33□□□□□ -0.76
NFKB1-212ENST00000600343 HERC5Q9UII4 1024 aaKnown RBP10.33□□□□□ -0.76
NFKB1-212ENST00000600343 ALOX15BO15296 676 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 PEX1O43933 1283 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 TSPAN1O60635 241 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 TCEA3O75764 348 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 HOXB7P09629 217 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 ZNF23P17027 643 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 RPA3P35244 121 aaPredicted RBP10.32□□□□□ -0.76
NFKB1-212ENST00000600343 KDSRQ06136 332 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 CTTNQ14247 550 aaKnown RBP10.32□□□□□ -0.76
NFKB1-212ENST00000600343 MDH1BQ5I0G3 518 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 LSMEM2Q8N112 164 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 CPSF7Q8N684 471 aaKnown RBP10.32□□□□□ -0.76
NFKB1-212ENST00000600343 PSPC1Q8WXF1 523 aaKnown RBP10.32□□□□□ -0.76
NFKB1-212ENST00000600343 TBC1D14Q9P2M4 693 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 PADI4Q9UM07 663 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 CASZ1Q86V15 1759 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 ERVV-2B6SEH9 535 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 CFAP99D6REC4 459 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 J3QRK9 145 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 CRTAMO95727 393 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 H2AFZP0C0S5 128 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 GLULP15104 373 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 NAALADL2Q58DX5 795 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 H2AFVQ71UI9 128 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 KIAA2013Q8IYS2 634 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 C4orf33Q8N1A6 199 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 PPM1KQ8N3J5 372 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 TSPAN14Q8NG11 270 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 JDP2Q8WYK2 163 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 FBXL8Q96CD0 374 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 ZNF496Q96IT1 587 aaPredicted RBP10.32□□□□□ -0.76
NFKB1-212ENST00000600343 RANBP9Q96S59 729 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 COQ7Q99807 217 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 METTL22Q9BUU2 404 aaPredicted RBP10.32□□□□□ -0.76
NFKB1-212ENST00000600343 CDH19Q9H159 772 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 TRABDQ9H4I3 376 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 KIAA1586Q9HCI6 787 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 THAP1Q9NVV9 213 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.32□□□□□ -0.76
NFKB1-212ENST00000600343 PCYOX1Q9UHG3 505 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 NAGPAQ9UK23 515 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 PLA2G4CQ9UP65 541 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 LRRC37A3O60309 1634 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 KPNA4O00629 521 aaPredicted RBP10.32□□□□□ -0.76
NFKB1-212ENST00000600343 DDX3YO15523 660 aaKnown RBP10.32□□□□□ -0.76
NFKB1-212ENST00000600343 GPAA1O43292 621 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 RAG1P15918 1043 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 LIFRP42702 1097 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 MRPS9P82933 396 aaKnown RBP10.32□□□□□ -0.76
NFKB1-212ENST00000600343 ITGADQ13349 1161 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 SLC1A5Q15758 541 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 USP41Q3LFD5 358 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 AGAP9Q5VTM2 703 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 XKR5Q6UX68 686 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.32□□□□□ -0.76
NFKB1-212ENST00000600343 C12orf50Q8NA57 414 aaPredicted RBP10.32□□□□□ -0.76
NFKB1-212ENST00000600343 HIPK4Q8NE63 616 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 ATP2A3Q93084 1043 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 SNF8Q96H20 258 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 WNK4Q96J92 1243 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 IMPG2Q9BZV3 1241 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 RAB26Q9ULW5 256 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 SMG5Q9UPR3 1016 aaKnown RBP10.32□□□□□ -0.76
NFKB1-212ENST00000600343 PCDHA3Q9Y5H8 950 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 METP08581 1390 aa10.32□□□□□ -0.76
NFKB1-212ENST00000600343 PRPF4O43172 522 aaKnown RBP eCLIP10.31□□□□□ -0.76
NFKB1-212ENST00000600343 CYP1A2P05177 515 aa10.31□□□□□ -0.76
NFKB1-212ENST00000600343 POLR2MP0CAP2 368 aa10.31□□□□□ -0.76
NFKB1-212ENST00000600343 CHKAP35790 457 aa10.31□□□□□ -0.76
NFKB1-212ENST00000600343 BTDP43251 543 aa10.31□□□□□ -0.76
NFKB1-212ENST00000600343 KRT6CP48668 564 aa10.31□□□□□ -0.76
NFKB1-212ENST00000600343 TIMM10P62072 90 aa10.31□□□□□ -0.76
NFKB1-212ENST00000600343 HIC1Q14526 733 aa10.31□□□□□ -0.76
NFKB1-212ENST00000600343 TTC27Q6P3X3 843 aa10.31□□□□□ -0.76
NFKB1-212ENST00000600343 LVRNQ6Q4G3 990 aa10.31□□□□□ -0.76
NFKB1-212ENST00000600343 HEATR4Q86WZ0 1026 aa10.31□□□□□ -0.76
NFKB1-212ENST00000600343 Q8N9G6 341 aaPredicted RBP10.31□□□□□ -0.76
NFKB1-212ENST00000600343 SEZ6LQ9BYH1 1024 aa10.31□□□□□ -0.76
NFKB1-212ENST00000600343 SHCBP1LQ9BZQ2 653 aa10.31□□□□□ -0.76
NFKB1-212ENST00000600343 PUS7LQ9H0K6 701 aaKnown RBP10.31□□□□□ -0.76
NFKB1-212ENST00000600343 C12orf4Q9NQ89 552 aa10.31□□□□□ -0.76
NFKB1-212ENST00000600343 AAASQ9NRG9 546 aa10.31□□□□□ -0.76
NFKB1-212ENST00000600343 LRRC4BQ9NT99 713 aa10.31□□□□□ -0.76
NFKB1-212ENST00000600343 DAPK2Q9UIK4 370 aa10.31□□□□□ -0.76
NFKB1-212ENST00000600343 FLT1P17948 1338 aa10.31□□□□□ -0.76
NFKB1-212ENST00000600343 CENPBD1B2RD01 187 aa10.31□□□□□ -0.76
NFKB1-212ENST00000600343 PSMD12O00232 456 aaPredicted RBP10.31□□□□□ -0.76
NFKB1-212ENST00000600343 TOM1O60784 492 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms