RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 SMIM31A0A1B0GVY4 71 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 TRDMT1O14717 391 aaKnown RBP3.7□□□□□ -1.82
VMP1-216ENST00000592790 OPLAHO14841 1288 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 EDF1O60869 148 aaKnown RBP3.7□□□□□ -1.82
VMP1-216ENST00000592790 SGPL1O95470 568 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 GH2P01242 217 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 KRT4P19013 534 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 ARL4AP40617 200 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 PTGIRP43119 386 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 CLK2P49760 499 aaKnown RBP3.7□□□□□ -1.82
VMP1-216ENST00000592790 PSMD7P51665 324 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 CLCN2P51788 898 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 EIF3EP60228 445 aaKnown RBP3.7□□□□□ -1.82
VMP1-216ENST00000592790 RPL26P61254 145 aaKnown RBP3.7□□□□□ -1.82
VMP1-216ENST00000592790 TNFAIP2Q03169 654 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 ART3Q13508 389 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 KRT72Q14CN4 511 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 SGSM1Q2NKQ1 1148 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 MMEL1Q495T6 779 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 ZC2HC1CQ53FD0 456 aaPredicted RBP3.7□□□□□ -1.82
VMP1-216ENST00000592790 SNX30Q5VWJ9 437 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 NAIF1Q69YI7 327 aaPredicted RBP3.7□□□□□ -1.82
VMP1-216ENST00000592790 KRT80Q6KB66 452 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 GJB7Q6PEY0 223 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 RGS9BPQ6ZS82 235 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 C3orf62Q6ZUJ4 267 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 C1orf186Q6ZWK4 172 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 LCA5Q86VQ0 697 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 RELL1Q8IUW5 271 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 C4orf19Q8IY42 314 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 SPDYE1Q8NFV5 336 aaPredicted RBP3.7□□□□□ -1.82
VMP1-216ENST00000592790 ETNPPLQ8TBG4 499 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 EPS8L1Q8TE68 723 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 SHC3Q92529 594 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 KRT35Q92764 455 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 APOPT1Q96IL0 206 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 UIMC1Q96RL1 719 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 CALN1Q9BXU9 219 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 ST6GALNAC4Q9H4F1 302 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 GPAMQ9HCL2 828 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 DMAP1Q9NPF5 467 aaPredicted RBP3.7□□□□□ -1.82
VMP1-216ENST00000592790 PICK1Q9NRD5 415 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 HEY2Q9UBP5 337 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 LNPEPQ9UIQ6 1025 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 ITGB1BP2Q9UKP3 347 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 AGO2Q9UKV8 859 aaKnown RBP3.7□□□□□ -1.82
VMP1-216ENST00000592790 TBX20Q9UMR3 447 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 RPS6KL1Q9Y6S9 549 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 MAST2Q6P0Q8 1798 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 GOLGA8IPA6NC78 632 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 GOLGA8JA6NMD2 632 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 PSMG1O95456 288 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 HSPA4LO95757 839 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 HARSP12081 509 aaKnown RBP3.7□□□□□ -1.82
VMP1-216ENST00000592790 CACNA2D1P54289 1103 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 PRKAA2P54646 552 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 AP1B1Q10567 949 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 ITPK1Q13572 414 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 ITGA9Q13797 1035 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 TRADDQ15628 312 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 ZNF667Q5HYK9 610 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 STRIP1Q5VSL9 837 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 CIAPIN1Q6FI81 312 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 ZFP1Q6P2D0 407 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 DRICH1Q6PGQ1 229 aaPredicted RBP3.7□□□□□ -1.82
VMP1-216ENST00000592790 TRMT1LQ7Z2T5 733 aaKnown RBP3.7□□□□□ -1.82
VMP1-216ENST00000592790 TRABD2AQ86V40 505 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 SLC26A11Q86WA9 606 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 LRRC6Q86X45 466 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 C4orf33Q8N1A6 199 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 TRIML2Q8N7C3 387 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 RIN3Q8TB24 985 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 ZNF75CPQ92670 426 aaPredicted RBP3.7□□□□□ -1.82
VMP1-216ENST00000592790 CFAP36Q96G28 342 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 MASTLQ96GX5 879 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 HIC2Q96JB3 615 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 PPP1R2P1Q96PQ5 205 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 NUDT12Q9BQG2 462 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 FAM213AQ9BRX8 229 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 MAF1Q9H063 256 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 RBAKQ9NYW8 714 aaPredicted RBP3.7□□□□□ -1.82
VMP1-216ENST00000592790 XPO7Q9UIA9 1087 aaKnown RBP3.7□□□□□ -1.82
VMP1-216ENST00000592790 TLK1Q9UKI8 766 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 PRR12Q9ULL5 1215 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 L3MBTL1Q9Y468 752 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 TACC3Q9Y6A5 838 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 COL14A1Q05707 1796 aaKnown RBP3.7□□□□□ -1.82
VMP1-216ENST00000592790 UBR2Q8IWV8 1755 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 LRP5O75197 1615 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 SLCO1B7G3V0H7 640 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 XPOTO43592 962 aaKnown RBP3.7□□□□□ -1.82
VMP1-216ENST00000592790 GAS2O43903 313 aaKnown RBP3.7□□□□□ -1.82
VMP1-216ENST00000592790 ATP9AO75110 1047 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 GLRA3O75311 464 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 ITGAVP06756 1048 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 KRT19P08727 400 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 MCF2P10911 925 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 CD58P19256 250 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 RFC5P40937 340 aa3.7□□□□□ -1.82
VMP1-216ENST00000592790 PSMC4P43686 418 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms