RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 BIRC3Q13489 604 aa14.96□□□□□ -0.01
CLIP3-205ENST00000592017 MYBPC2Q14324 1141 aa14.96□□□□□ -0.01
CLIP3-205ENST00000592017 SLC39A12Q504Y0 691 aa14.96□□□□□ -0.01
CLIP3-205ENST00000592017 THEM5Q8N1Q8 247 aa14.96□□□□□ -0.01
CLIP3-205ENST00000592017 PDCL2Q8N4E4 241 aa14.96□□□□□ -0.01
CLIP3-205ENST00000592017 OR10T2Q8NGX3 314 aa14.96□□□□□ -0.01
CLIP3-205ENST00000592017 PLEKHO2Q8TD55 490 aa14.96□□□□□ -0.01
CLIP3-205ENST00000592017 DOCK6Q96HP0 2047 aa14.96□□□□□ -0.01
CLIP3-205ENST00000592017 HPDLQ96IR7 371 aa14.96□□□□□ -0.01
CLIP3-205ENST00000592017 RTP3Q9BQQ7 232 aa14.96□□□□□ -0.01
CLIP3-205ENST00000592017 GZF1Q9H116 711 aaPredicted RBP14.96□□□□□ -0.01
CLIP3-205ENST00000592017 GDE1Q9NZC3 331 aa14.96□□□□□ -0.01
CLIP3-205ENST00000592017 MAN1B1Q9UKM7 699 aa14.96□□□□□ -0.01
CLIP3-205ENST00000592017 L1RE1Q9UN81 338 aa14.96□□□□□ -0.01
CLIP3-205ENST00000592017 DOCK8Q8NF50 2099 aa14.96□□□□□ -0.02
CLIP3-205ENST00000592017 MTCL1Q9Y4B5 1905 aaKnown RBP14.96□□□□□ -0.02
CLIP3-205ENST00000592017 MOSPD3O75425 235 aa14.95□□□□□ -0.02
CLIP3-205ENST00000592017 AOC1P19801 751 aa14.95□□□□□ -0.02
CLIP3-205ENST00000592017 RPL13P26373 211 aaKnown RBP14.95□□□□□ -0.02
CLIP3-205ENST00000592017 TRPC3Q13507 836 aa14.95□□□□□ -0.02
CLIP3-205ENST00000592017 CENPPQ6IPU0 288 aa14.95□□□□□ -0.02
CLIP3-205ENST00000592017 MTSS1LQ765P7 747 aa14.95□□□□□ -0.02
CLIP3-205ENST00000592017 ADGRF2Q8IZF7 708 aa14.95□□□□□ -0.02
CLIP3-205ENST00000592017 ATAD1Q8NBU5 361 aa14.95□□□□□ -0.02
CLIP3-205ENST00000592017 SPATA20Q8TB22 786 aa14.95□□□□□ -0.02
CLIP3-205ENST00000592017 PARD3BQ8TEW8 1205 aa14.95□□□□□ -0.02
CLIP3-205ENST00000592017 TSG101Q99816 390 aa14.95□□□□□ -0.02
CLIP3-205ENST00000592017 KXD1Q9BQD3 176 aa14.95□□□□□ -0.02
CLIP3-205ENST00000592017 PLA2G2FQ9BZM2 168 aa14.95□□□□□ -0.02
CLIP3-205ENST00000592017 SLC27A5Q9Y2P5 690 aa14.95□□□□□ -0.02
CLIP3-205ENST00000592017 YIPF1Q9Y548 306 aa14.95□□□□□ -0.02
CLIP3-205ENST00000592017 MTMR11A4FU01 709 aa14.94□□□□□ -0.02
CLIP3-205ENST00000592017 H0Y858 1186 aa14.94□□□□□ -0.02
CLIP3-205ENST00000592017 BIN1O00499 593 aa14.94□□□□□ -0.02
CLIP3-205ENST00000592017 AKAP3O75969 853 aa14.94□□□□□ -0.02
CLIP3-205ENST00000592017 MICAL2O94851 1124 aa14.94□□□□□ -0.02
CLIP3-205ENST00000592017 ACAT1P24752 427 aaKnown RBP14.94□□□□□ -0.02
CLIP3-205ENST00000592017 MRE11P49959 708 aa14.94□□□□□ -0.02
CLIP3-205ENST00000592017 EPHA5P54756 1037 aa14.94□□□□□ -0.02
CLIP3-205ENST00000592017 DLG4P78352 724 aa14.94□□□□□ -0.02
CLIP3-205ENST00000592017 ADAM9Q13443 819 aa14.94□□□□□ -0.02
CLIP3-205ENST00000592017 NFIL3Q16649 462 aa14.94□□□□□ -0.02
CLIP3-205ENST00000592017 ZCWPW2Q504Y3 356 aa14.94□□□□□ -0.02
CLIP3-205ENST00000592017 TDRD10Q5VZ19 366 aaKnown RBP14.94□□□□□ -0.02
CLIP3-205ENST00000592017 TANGO2Q6ICL3 276 aa14.94□□□□□ -0.02
CLIP3-205ENST00000592017 FAM186BQ8IYM0 893 aa14.94□□□□□ -0.02
CLIP3-205ENST00000592017 ELMOD1Q8N336 334 aa14.94□□□□□ -0.02
CLIP3-205ENST00000592017 TTC9BQ8N6N2 239 aa14.94□□□□□ -0.02
CLIP3-205ENST00000592017 TOP6BLQ8N6T0 577 aa14.94□□□□□ -0.02
CLIP3-205ENST00000592017 ZNF516Q92618 1163 aa14.94□□□□□ -0.02
CLIP3-205ENST00000592017 EEF2KMTQ96G04 330 aa14.94□□□□□ -0.02
CLIP3-205ENST00000592017 ZNF512Q96ME7 567 aaPredicted RBP14.94□□□□□ -0.02
CLIP3-205ENST00000592017 ZSWIM3Q96MP5 696 aa14.94□□□□□ -0.02
CLIP3-205ENST00000592017 IPO9Q96P70 1041 aaKnown RBP14.94□□□□□ -0.02
CLIP3-205ENST00000592017 MMS19Q96T76 1030 aa14.94□□□□□ -0.02
CLIP3-205ENST00000592017 LRRC3Q9BY71 257 aa14.94□□□□□ -0.02
CLIP3-205ENST00000592017 ZCWPW1Q9H0M4 648 aa14.94□□□□□ -0.02
CLIP3-205ENST00000592017 DNAJC25Q9H1X3 360 aa14.94□□□□□ -0.02
CLIP3-205ENST00000592017 MMRN2Q9H8L6 949 aa14.94□□□□□ -0.02
CLIP3-205ENST00000592017 FAM86C1Q9NVL1 165 aa14.94□□□□□ -0.02
CLIP3-205ENST00000592017 GDAP2Q9NXN4 497 aa14.94□□□□□ -0.02
CLIP3-205ENST00000592017 DDX43Q9NXZ2 648 aaKnown RBP14.94□□□□□ -0.02
CLIP3-205ENST00000592017 ZFHX2Q9C0A1 2572 aaPredicted RBP14.94□□□□□ -0.02
CLIP3-205ENST00000592017 TSC2P49815 1807 aa14.94□□□□□ -0.02
CLIP3-205ENST00000592017 STK25O00506 426 aa14.93□□□□□ -0.02
CLIP3-205ENST00000592017 ZNF197O14709 1029 aa14.93□□□□□ -0.02
CLIP3-205ENST00000592017 CST3P01034 146 aaPredicted RBP14.93□□□□□ -0.02
CLIP3-205ENST00000592017 TRIM49P0CI25 452 aa14.93□□□□□ -0.02
CLIP3-205ENST00000592017 TRIM49CP0CI26 452 aa14.93□□□□□ -0.02
CLIP3-205ENST00000592017 KRT13P13646 458 aa14.93□□□□□ -0.02
CLIP3-205ENST00000592017 GJA1P17302 382 aa14.93□□□□□ -0.02
CLIP3-205ENST00000592017 FCARP24071 287 aa14.93□□□□□ -0.02
CLIP3-205ENST00000592017 VAMP7P51809 220 aa14.93□□□□□ -0.02
CLIP3-205ENST00000592017 MYL6P60660 151 aa14.93□□□□□ -0.02
CLIP3-205ENST00000592017 TNNC1P63316 161 aa14.93□□□□□ -0.02
CLIP3-205ENST00000592017 MYL7Q01449 175 aa14.93□□□□□ -0.02
CLIP3-205ENST00000592017 TSPY1Q01534 308 aa14.93□□□□□ -0.02
CLIP3-205ENST00000592017 STIM1Q13586 685 aa14.93□□□□□ -0.02
CLIP3-205ENST00000592017 CAMK4Q16566 473 aa14.93□□□□□ -0.02
CLIP3-205ENST00000592017 EDRF1Q3B7T1 1238 aa14.93□□□□□ -0.02
CLIP3-205ENST00000592017 MGAT5BQ3V5L5 792 aa14.93□□□□□ -0.02
CLIP3-205ENST00000592017 FAM78AQ5JUQ0 283 aa14.93□□□□□ -0.02
CLIP3-205ENST00000592017 CYP4A22Q5TCH4 519 aa14.93□□□□□ -0.02
CLIP3-205ENST00000592017 IQCEQ6IPM2 695 aa14.93□□□□□ -0.02
CLIP3-205ENST00000592017 KLHL10Q6JEL2 608 aa14.93□□□□□ -0.02
CLIP3-205ENST00000592017 PDZD4Q76G19 769 aaPredicted RBP14.93□□□□□ -0.02
CLIP3-205ENST00000592017 LRRTM3Q86VH5 581 aa14.93□□□□□ -0.02
CLIP3-205ENST00000592017 OSTM1Q86WC4 334 aa14.93□□□□□ -0.02
CLIP3-205ENST00000592017 ELOA2Q8IYF1 753 aaPredicted RBP14.93□□□□□ -0.02
CLIP3-205ENST00000592017 TMEM86AQ8N2M4 240 aa14.93□□□□□ -0.02
CLIP3-205ENST00000592017 TMEM174Q8WUU8 243 aa14.93□□□□□ -0.02
CLIP3-205ENST00000592017 SEPT5Q99719 369 aaPredicted RBP14.93□□□□□ -0.02
CLIP3-205ENST00000592017 TBC1D17Q9HA65 648 aa14.93□□□□□ -0.02
CLIP3-205ENST00000592017 ARHGEF3Q9NR81 526 aa14.93□□□□□ -0.02
CLIP3-205ENST00000592017 ABI2Q9NYB9 513 aaPredicted RBP14.93□□□□□ -0.02
CLIP3-205ENST00000592017 NOTCH4Q99466 2003 aa14.93□□□□□ -0.02
CLIP3-205ENST00000592017 TRIM49BA6NDI0 452 aa14.92□□□□□ -0.02
CLIP3-205ENST00000592017 PSMA7O14818 248 aa14.92□□□□□ -0.02
CLIP3-205ENST00000592017 HCRTO43612 131 aa14.92□□□□□ -0.02
CLIP3-205ENST00000592017 ECI2O75521 394 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms