RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 KCTD17Q8N5Z5 321 aa12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 GPATCH1Q9BRR8 931 aaKnown RBP12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 TRIM51Q9BSJ1 452 aa12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 CCDC88AQ3V6T2 1871 aa12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 KMOO15229 486 aa12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 ADCY6O43306 1168 aa12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 SLC5A2P31639 672 aa12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 COPB2P35606 906 aa12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 BOLA3Q53S33 107 aa12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 DENND2CQ68D51 928 aa12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 ZFP28Q8NHY6 868 aa12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 ACMSDQ8TDX5 336 aa12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 STMN4Q9H169 189 aaPredicted RBP12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 MLXIPLQ9NP71 852 aa12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 COL14A1Q05707 1796 aaKnown RBP12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 LINC00854A0A1B0GVQ3 168 aa12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 CRABP2P29373 138 aa12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 GALCP54803 685 aa12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 ARHGAP4P98171 946 aa12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 PLCB3Q01970 1234 aa12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 KCNA1Q09470 495 aa12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 MKRN3Q13064 507 aaKnown RBP12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 C6orf118Q5T5N4 469 aa12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 PCNX4Q63HM2 1172 aa12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 TWF2Q6IBS0 349 aaKnown RBP12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 EGLN2Q96KS0 407 aa12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 TGS1Q96RS0 853 aaKnown RBP12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 OSGEPQ9NPF4 335 aa12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 TMEM59LQ9UK28 342 aa12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 RREB1Q92766 1687 aa12.84□□□□□ -0.35
SMARCA4-217ENST00000591595 CHMP2AO43633 222 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 FAM13AO94988 1023 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 PIM1P11309 404 aaPredicted RBP12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 HMOX2P30519 316 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 CETN2P41208 172 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 AP3M2P53677 418 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 YARSP54577 528 aaKnown RBP12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 SLC12A3P55017 1021 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 TCP10Q12799 353 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 ZNF211Q13398 564 aaPredicted RBP12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 ARHGAP44Q17R89 818 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 LRRC57Q8N9N7 239 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 FMO2Q99518 471 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 MIPEPQ99797 713 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 B3GNT4Q9C0J1 378 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 RBM38Q9H0Z9 239 aaKnown RBP12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 DDX4Q9NQI0 724 aaKnown RBP12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 CLEC11AQ9Y240 323 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 PITPNM2Q9BZ72 1349 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 GOLGA8CPA6NN73 597 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 DNAJC6O75061 913 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 TMCC2O75069 709 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 B3GALNT1O75752 331 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 SNHG28P0DPA3 235 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 EEF2P13639 858 aaKnown RBP12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 MTFR1Q15390 333 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 PHKG1Q16816 387 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 NADK2Q4G0N4 442 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 PPP1R2P3Q6NXS1 205 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 RHOT2Q8IXI1 618 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 MYCT1Q8N699 235 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 EFHD2Q96C19 240 aaPredicted RBP12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 TCF12Q99081 682 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 BCAS3Q9H6U6 928 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 COMMD8Q9NX08 183 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 GIN1Q9NXP7 522 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 TRAF3IP3Q9Y228 551 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 SUGT1Q9Y2Z0 365 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 PDXKO00764 312 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 MAPK13O15264 365 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 FUCA1P04066 466 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 EIF2S1P05198 315 aaKnown RBP12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 CLK2P49760 499 aaKnown RBP12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 HYIQ5T013 277 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 RDH13Q8NBN7 331 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 VPS37AQ8NEZ2 397 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 GRAMD1AQ96CP6 724 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 MED30Q96HR3 178 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 CADM1Q9BY67 442 aaKnown RBP12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 TYW1Q9NV66 732 aaKnown RBP12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 HACD3Q9P035 362 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 ROBO1Q9Y6N7 1651 aa12.83□□□□□ -0.36
SMARCA4-217ENST00000591595 CLPTM1O96005 669 aa12.82□□□□□ -0.36
SMARCA4-217ENST00000591595 ETV3P41162 512 aa12.82□□□□□ -0.36
SMARCA4-217ENST00000591595 PRKCIP41743 596 aa12.82□□□□□ -0.36
SMARCA4-217ENST00000591595 SLCO1A2P46721 670 aa12.82□□□□□ -0.36
SMARCA4-217ENST00000591595 ENTPD1P49961 510 aa12.82□□□□□ -0.36
SMARCA4-217ENST00000591595 PLTPP55058 493 aa12.82□□□□□ -0.36
SMARCA4-217ENST00000591595 FAM196AQ6ZSG2 479 aa12.82□□□□□ -0.36
SMARCA4-217ENST00000591595 CKAP2Q8WWK9 683 aa12.82□□□□□ -0.36
SMARCA4-217ENST00000591595 EME1Q96AY2 570 aa12.82□□□□□ -0.36
SMARCA4-217ENST00000591595 MXD3Q9BW11 206 aa12.82□□□□□ -0.36
SMARCA4-217ENST00000591595 IKZF4Q9H2S9 585 aa12.82□□□□□ -0.36
SMARCA4-217ENST00000591595 SLITRK6Q9H5Y7 841 aa12.82□□□□□ -0.36
SMARCA4-217ENST00000591595 TBC1D23Q9NUY8 699 aa12.82□□□□□ -0.36
SMARCA4-217ENST00000591595 POLLQ9UGP5 575 aa12.82□□□□□ -0.36
SMARCA4-217ENST00000591595 AJAP1Q9UKB5 411 aaPredicted RBP12.82□□□□□ -0.36
SMARCA4-217ENST00000591595 CES2O00748 559 aa12.82□□□□□ -0.36
SMARCA4-217ENST00000591595 CDK2AP1O14519 115 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms