RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 LUC7L2Q9Y383 392 aaKnown RBP12.44□□□□□ -0.42
CDRT1-207ENST00000583965 PCDHB4Q9Y5E5 795 aa12.44□□□□□ -0.42
CDRT1-207ENST00000583965 TIMM13Q9Y5L4 95 aaPredicted RBP12.44□□□□□ -0.42
CDRT1-207ENST00000583965 BACE2Q9Y5Z0 518 aa12.44□□□□□ -0.42
CDRT1-207ENST00000583965 GREB1Q4ZG55 1949 aa12.44□□□□□ -0.42
CDRT1-207ENST00000583965 PATJQ8NI35 1801 aa12.44□□□□□ -0.42
CDRT1-207ENST00000583965 GOLGA6L6A8MZA4 724 aa12.43□□□□□ -0.42
CDRT1-207ENST00000583965 TBC1D4O60343 1298 aa12.43□□□□□ -0.42
CDRT1-207ENST00000583965 PAEPP09466 180 aa12.43□□□□□ -0.42
CDRT1-207ENST00000583965 CCDC172P0C7W6 258 aa12.43□□□□□ -0.42
CDRT1-207ENST00000583965 SOX5P35711 763 aa12.43□□□□□ -0.42
CDRT1-207ENST00000583965 BPIFB4P59827 614 aa12.43□□□□□ -0.42
CDRT1-207ENST00000583965 TSPY1Q01534 308 aa12.43□□□□□ -0.42
CDRT1-207ENST00000583965 SMC1AQ14683 1233 aaKnown RBP12.43□□□□□ -0.42
CDRT1-207ENST00000583965 PSMD5Q16401 504 aa12.43□□□□□ -0.42
CDRT1-207ENST00000583965 CTXN3Q4LDR2 81 aa12.43□□□□□ -0.42
CDRT1-207ENST00000583965 RTP2Q5QGT7 225 aa12.43□□□□□ -0.42
CDRT1-207ENST00000583965 TMEM270Q6UE05 265 aa12.43□□□□□ -0.42
CDRT1-207ENST00000583965 TMC7Q7Z402 723 aa12.43□□□□□ -0.42
CDRT1-207ENST00000583965 SPRED2Q7Z698 418 aa12.43□□□□□ -0.42
CDRT1-207ENST00000583965 OSTM1Q86WC4 334 aa12.43□□□□□ -0.42
CDRT1-207ENST00000583965 CNGA4Q8IV77 575 aa12.43□□□□□ -0.42
CDRT1-207ENST00000583965 FAM71AQ8IYT1 594 aa12.43□□□□□ -0.42
CDRT1-207ENST00000583965 CRYBG2Q8N1P7 616 aa12.43□□□□□ -0.42
CDRT1-207ENST00000583965 LNX1Q8TBB1 728 aaPredicted RBP12.43□□□□□ -0.42
CDRT1-207ENST00000583965 WHAMMQ8TF30 809 aa12.43□□□□□ -0.42
CDRT1-207ENST00000583965 POF1BQ8WVV4 589 aa12.43□□□□□ -0.42
CDRT1-207ENST00000583965 ARNTL2Q8WYA1 636 aa12.43□□□□□ -0.42
CDRT1-207ENST00000583965 RIN2Q8WYP3 895 aaPredicted RBP12.43□□□□□ -0.42
CDRT1-207ENST00000583965 SYN2Q92777 582 aaPredicted RBP12.43□□□□□ -0.42
CDRT1-207ENST00000583965 GPR88Q9GZN0 384 aa12.43□□□□□ -0.42
CDRT1-207ENST00000583965 ZNF576Q9H609 170 aa12.43□□□□□ -0.42
CDRT1-207ENST00000583965 ALG13Q9NP73 1137 aaKnown RBP12.43□□□□□ -0.42
CDRT1-207ENST00000583965 FNIP2Q9P278 1114 aa12.43□□□□□ -0.42
CDRT1-207ENST00000583965 MTRRQ9UBK8 725 aa12.43□□□□□ -0.42
CDRT1-207ENST00000583965 KIAA1257Q9ULG3 409 aa12.43□□□□□ -0.42
CDRT1-207ENST00000583965 IRAK3Q9Y616 596 aa12.43□□□□□ -0.42
CDRT1-207ENST00000583965 FOXN3O00409 490 aaPredicted RBP12.42□□□□□ -0.42
CDRT1-207ENST00000583965 FSCN2O14926 492 aa12.42□□□□□ -0.42
CDRT1-207ENST00000583965 GRM6O15303 877 aa12.42□□□□□ -0.42
CDRT1-207ENST00000583965 LPXNO60711 386 aa12.42□□□□□ -0.42
CDRT1-207ENST00000583965 LILRB3O75022 631 aa12.42□□□□□ -0.42
CDRT1-207ENST00000583965 KRT5P13647 590 aa12.42□□□□□ -0.42
CDRT1-207ENST00000583965 LMO2P25791 158 aa12.42□□□□□ -0.42
CDRT1-207ENST00000583965 CASP14P31944 242 aa12.42□□□□□ -0.42
CDRT1-207ENST00000583965 KRT9P35527 623 aa12.42□□□□□ -0.42
CDRT1-207ENST00000583965 FXR1P51114 621 aaKnown RBP eCLIP12.42□□□□□ -0.42
CDRT1-207ENST00000583965 ZNF132P52740 706 aa12.42□□□□□ -0.42
CDRT1-207ENST00000583965 RAD23BP54727 409 aa12.42□□□□□ -0.42
CDRT1-207ENST00000583965 SMARCB1Q12824 385 aa12.42□□□□□ -0.42
CDRT1-207ENST00000583965 ARID5BQ14865 1188 aa12.42□□□□□ -0.42
CDRT1-207ENST00000583965 PTPN14Q15678 1187 aa12.42□□□□□ -0.42
CDRT1-207ENST00000583965 MAPRE1Q15691 268 aaKnown RBP12.42□□□□□ -0.42
CDRT1-207ENST00000583965 DCP1BQ8IZD4 617 aaKnown RBP12.42□□□□□ -0.42
CDRT1-207ENST00000583965 SLC4A11Q8NBS3 891 aa12.42□□□□□ -0.42
CDRT1-207ENST00000583965 RBBP8NLQ8NC74 664 aaPredicted RBP12.42□□□□□ -0.42
CDRT1-207ENST00000583965 B3GALNT2Q8NCR0 500 aa12.42□□□□□ -0.42
CDRT1-207ENST00000583965 CPLX3Q8WVH0 158 aa12.42□□□□□ -0.42
CDRT1-207ENST00000583965 TMEM176AQ96HP8 235 aa12.42□□□□□ -0.42
CDRT1-207ENST00000583965 B3GALT6Q96L58 329 aa12.42□□□□□ -0.42
CDRT1-207ENST00000583965 RTP3Q9BQQ7 232 aa12.42□□□□□ -0.42
CDRT1-207ENST00000583965 SYT15Q9BQS2 421 aa12.42□□□□□ -0.42
CDRT1-207ENST00000583965 RXFP1Q9HBX9 757 aa12.42□□□□□ -0.42
CDRT1-207ENST00000583965 ENTPD7Q9NQZ7 604 aa12.42□□□□□ -0.42
CDRT1-207ENST00000583965 AIPL1Q9NZN9 384 aa12.42□□□□□ -0.42
CDRT1-207ENST00000583965 LRRC53A6NM62 1247 aa12.41□□□□□ -0.42
CDRT1-207ENST00000583965 AKR1B15C9JRZ8 316 aaPredicted RBP12.41□□□□□ -0.42
CDRT1-207ENST00000583965 C2CD2LO14523 706 aa12.41□□□□□ -0.42
CDRT1-207ENST00000583965 MFAP3LO75121 409 aa12.41□□□□□ -0.42
CDRT1-207ENST00000583965 CXCL14O95715 111 aa12.41□□□□□ -0.42
CDRT1-207ENST00000583965 PDGFRBP09619 1106 aa12.41□□□□□ -0.42
CDRT1-207ENST00000583965 VDRP11473 427 aa12.41□□□□□ -0.42
CDRT1-207ENST00000583965 FERP16591 822 aa12.41□□□□□ -0.42
CDRT1-207ENST00000583965 PTPN1P18031 435 aaKnown RBP12.41□□□□□ -0.42
CDRT1-207ENST00000583965 DNAJB1P25685 340 aa12.41□□□□□ -0.42
CDRT1-207ENST00000583965 CLCN1P35523 988 aa12.41□□□□□ -0.42
CDRT1-207ENST00000583965 USP8P40818 1118 aa12.41□□□□□ -0.42
CDRT1-207ENST00000583965 PTK2Q05397 1052 aa12.41□□□□□ -0.42
CDRT1-207ENST00000583965 STILQ15468 1287 aa12.41□□□□□ -0.42
CDRT1-207ENST00000583965 PTPROQ16827 1216 aa12.41□□□□□ -0.42
CDRT1-207ENST00000583965 TSR1Q2NL82 804 aaKnown RBP12.41□□□□□ -0.42
CDRT1-207ENST00000583965 ZNF394Q53GI3 561 aa12.41□□□□□ -0.42
CDRT1-207ENST00000583965 INTS6LQ5JSJ4 861 aaKnown RBP12.41□□□□□ -0.42
CDRT1-207ENST00000583965 SFMBT2Q5VUG0 894 aa12.41□□□□□ -0.42
CDRT1-207ENST00000583965 SLC8B1Q6J4K2 584 aa12.41□□□□□ -0.42
CDRT1-207ENST00000583965 PRSS55Q6UWB4 352 aaPredicted RBP12.41□□□□□ -0.42
CDRT1-207ENST00000583965 OR8K1Q8NGG5 319 aa12.41□□□□□ -0.42
CDRT1-207ENST00000583965 TRIM44Q96DX7 344 aaPredicted RBP12.41□□□□□ -0.42
CDRT1-207ENST00000583965 DNAJC7Q99615 494 aa12.41□□□□□ -0.42
CDRT1-207ENST00000583965 TCF25Q9BQ70 676 aa12.41□□□□□ -0.42
CDRT1-207ENST00000583965 EMILIN2Q9BXX0 1053 aa12.41□□□□□ -0.42
CDRT1-207ENST00000583965 ELOVL4Q9GZR5 314 aa12.41□□□□□ -0.42
CDRT1-207ENST00000583965 ZCWPW1Q9H0M4 648 aa12.41□□□□□ -0.42
CDRT1-207ENST00000583965 CERS4Q9HA82 394 aa12.41□□□□□ -0.42
CDRT1-207ENST00000583965 HMGXB4Q9UGU5 601 aa12.41□□□□□ -0.42
CDRT1-207ENST00000583965 NME7Q9Y5B8 376 aa12.41□□□□□ -0.42
CDRT1-207ENST00000583965 PRRC2BQ5JSZ5 2229 aaKnown RBP12.4□□□□□ -0.42
CDRT1-207ENST00000583965 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.4□□□□□ -0.42
CDRT1-207ENST00000583965 RNF225M0QZC1 329 aaPredicted RBP12.4□□□□□ -0.42
CDRT1-207ENST00000583965 CYP26A1O43174 497 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms