RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 ASIC2Q16515 512 aa17.45■□□□□ 0.38
CDK5RAP3-228ENST00000583363 FUT10Q6P4F1 479 aa17.45■□□□□ 0.38
CDK5RAP3-228ENST00000583363 UNC93AQ86WB7 457 aa17.45■□□□□ 0.38
CDK5RAP3-228ENST00000583363 OSTM1Q86WC4 334 aa17.45■□□□□ 0.38
CDK5RAP3-228ENST00000583363 LRRC8AQ8IWT6 810 aa17.45■□□□□ 0.38
CDK5RAP3-228ENST00000583363 ADGRF2Q8IZF7 708 aa17.45■□□□□ 0.38
CDK5RAP3-228ENST00000583363 OR6B3Q8NGW1 331 aa17.45■□□□□ 0.38
CDK5RAP3-228ENST00000583363 SPATA18Q8TC71 538 aa17.45■□□□□ 0.38
CDK5RAP3-228ENST00000583363 ELOVL4Q9GZR5 314 aa17.45■□□□□ 0.38
CDK5RAP3-228ENST00000583363 CERS4Q9HA82 394 aa17.45■□□□□ 0.38
CDK5RAP3-228ENST00000583363 ZNHIT6Q9NWK9 470 aaKnown RBP17.45■□□□□ 0.38
CDK5RAP3-228ENST00000583363 SPG21Q9NZD8 308 aa17.45■□□□□ 0.38
CDK5RAP3-228ENST00000583363 NME7Q9Y5B8 376 aa17.45■□□□□ 0.38
CDK5RAP3-228ENST00000583363 PCDHB12Q9Y5F1 795 aa17.45■□□□□ 0.38
CDK5RAP3-228ENST00000583363 TIMM13Q9Y5L4 95 aaPredicted RBP17.45■□□□□ 0.38
CDK5RAP3-228ENST00000583363 SYN3O14994 580 aa17.44■□□□□ 0.38
CDK5RAP3-228ENST00000583363 SKILP12757 684 aa17.44■□□□□ 0.38
CDK5RAP3-228ENST00000583363 FECHP22830 423 aa17.44■□□□□ 0.38
CDK5RAP3-228ENST00000583363 LMO2P25791 158 aa17.44■□□□□ 0.38
CDK5RAP3-228ENST00000583363 PRKCIP41743 596 aa17.44■□□□□ 0.38
CDK5RAP3-228ENST00000583363 LHX1P48742 406 aa17.44■□□□□ 0.38
CDK5RAP3-228ENST00000583363 NDST1P52848 882 aa17.44■□□□□ 0.38
CDK5RAP3-228ENST00000583363 RAD23BP54727 409 aa17.44■□□□□ 0.38
CDK5RAP3-228ENST00000583363 BPIFB4P59827 614 aa17.44■□□□□ 0.38
CDK5RAP3-228ENST00000583363 CDK17Q00537 523 aa17.44■□□□□ 0.38
CDK5RAP3-228ENST00000583363 ARID5AQ03989 594 aa17.44■□□□□ 0.38
CDK5RAP3-228ENST00000583363 MEA1Q16626 185 aa17.44■□□□□ 0.38
CDK5RAP3-228ENST00000583363 TAS1R1Q7RTX1 841 aa17.44■□□□□ 0.38
CDK5RAP3-228ENST00000583363 METTL23Q86XA0 190 aa17.44■□□□□ 0.38
CDK5RAP3-228ENST00000583363 RBBP8NLQ8NC74 664 aaPredicted RBP17.44■□□□□ 0.38
CDK5RAP3-228ENST00000583363 TWNKQ96RR1 684 aa17.44■□□□□ 0.38
CDK5RAP3-228ENST00000583363 SNX25Q9H3E2 840 aa17.44■□□□□ 0.38
CDK5RAP3-228ENST00000583363 MTCH2Q9Y6C9 303 aa17.44■□□□□ 0.38
CDK5RAP3-228ENST00000583363 EPOPA6NHQ4 379 aa17.43■□□□□ 0.38
CDK5RAP3-228ENST00000583363 ARHGEF15O94989 841 aa17.43■□□□□ 0.38
CDK5RAP3-228ENST00000583363 SERPING1P05155 500 aa17.43■□□□□ 0.38
CDK5RAP3-228ENST00000583363 FGFR3P22607 806 aa17.43■□□□□ 0.38
CDK5RAP3-228ENST00000583363 TKTP29401 623 aaKnown RBP17.43■□□□□ 0.38
CDK5RAP3-228ENST00000583363 BMPR1AP36894 532 aa17.43■□□□□ 0.38
CDK5RAP3-228ENST00000583363 KCNQ1P51787 676 aa17.43■□□□□ 0.38
CDK5RAP3-228ENST00000583363 MRPL58Q14197 206 aaKnown RBP17.43■□□□□ 0.38
CDK5RAP3-228ENST00000583363 ZNF394Q53GI3 561 aa17.43■□□□□ 0.38
CDK5RAP3-228ENST00000583363 FAM171A1Q5VUB5 890 aa17.43■□□□□ 0.38
CDK5RAP3-228ENST00000583363 HGSNATQ68CP4 663 aa17.43■□□□□ 0.38
CDK5RAP3-228ENST00000583363 GPIHBP1Q8IV16 184 aa17.43■□□□□ 0.38
CDK5RAP3-228ENST00000583363 RNF168Q8IYW5 571 aaPredicted RBP17.43■□□□□ 0.38
CDK5RAP3-228ENST00000583363 CRYBG2Q8N1P7 616 aa17.43■□□□□ 0.38
CDK5RAP3-228ENST00000583363 SLC4A11Q8NBS3 891 aa17.43■□□□□ 0.38
CDK5RAP3-228ENST00000583363 TMEM176AQ96HP8 235 aa17.43■□□□□ 0.38
CDK5RAP3-228ENST00000583363 CHP1Q99653 195 aa17.43■□□□□ 0.38
CDK5RAP3-228ENST00000583363 NT5C1AQ9BXI3 368 aa17.43■□□□□ 0.38
CDK5RAP3-228ENST00000583363 BZW2Q9Y6E2 419 aaKnown RBP17.43■□□□□ 0.38
CDK5RAP3-228ENST00000583363 SF3B1O75533 1304 aaKnown RBP eCLIP17.43■□□□□ 0.38
CDK5RAP3-228ENST00000583363 LINC01553A4QN01 128 aa17.42■□□□□ 0.38
CDK5RAP3-228ENST00000583363 A8MXQ7 604 aa17.42■□□□□ 0.38
CDK5RAP3-228ENST00000583363 OAZ2O95190 189 aa17.42■□□□□ 0.38
CDK5RAP3-228ENST00000583363 PAEPP09466 180 aa17.42■□□□□ 0.38
CDK5RAP3-228ENST00000583363 PDGFRBP09619 1106 aa17.42■□□□□ 0.38
CDK5RAP3-228ENST00000583363 CYP11B1P15538 503 aa17.42■□□□□ 0.38
CDK5RAP3-228ENST00000583363 POU3F3P20264 500 aaPredicted RBP17.42■□□□□ 0.38
CDK5RAP3-228ENST00000583363 PPM1AP35813 382 aa17.42■□□□□ 0.38
CDK5RAP3-228ENST00000583363 PLCB3Q01970 1234 aa17.42■□□□□ 0.38
CDK5RAP3-228ENST00000583363 PTK2Q05397 1052 aa17.42■□□□□ 0.38
CDK5RAP3-228ENST00000583363 KLHL30Q0D2K2 578 aa17.42■□□□□ 0.38
CDK5RAP3-228ENST00000583363 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.42■□□□□ 0.38
CDK5RAP3-228ENST00000583363 DDX53Q86TM3 631 aaKnown RBP17.42■□□□□ 0.38
CDK5RAP3-228ENST00000583363 SLC47A2Q86VL8 602 aa17.42■□□□□ 0.38
CDK5RAP3-228ENST00000583363 TMEM169Q96HH4 297 aa17.42■□□□□ 0.38
CDK5RAP3-228ENST00000583363 RTP3Q9BQQ7 232 aa17.42■□□□□ 0.38
CDK5RAP3-228ENST00000583363 VN1R3Q9BXE9 311 aa17.42■□□□□ 0.38
CDK5RAP3-228ENST00000583363 HAUS4Q9H6D7 363 aa17.42■□□□□ 0.38
CDK5RAP3-228ENST00000583363 ACP6Q9NPH0 428 aa17.42■□□□□ 0.38
CDK5RAP3-228ENST00000583363 DDX43Q9NXZ2 648 aaKnown RBP17.42■□□□□ 0.38
CDK5RAP3-228ENST00000583363 HMGXB4Q9UGU5 601 aa17.42■□□□□ 0.38
CDK5RAP3-228ENST00000583363 KIAA1257Q9ULG3 409 aa17.42■□□□□ 0.38
CDK5RAP3-228ENST00000583363 HCRTO43612 131 aa17.41■□□□□ 0.38
CDK5RAP3-228ENST00000583363 CALCAP01258 141 aa17.41■□□□□ 0.38
CDK5RAP3-228ENST00000583363 SKIV2LQ15477 1246 aaKnown RBP17.41■□□□□ 0.38
CDK5RAP3-228ENST00000583363 USP41Q3LFD5 358 aa17.41■□□□□ 0.38
CDK5RAP3-228ENST00000583363 OVOS1Q6IE37 1185 aa17.41■□□□□ 0.38
CDK5RAP3-228ENST00000583363 TMTC1Q8IUR5 882 aa17.41■□□□□ 0.38
CDK5RAP3-228ENST00000583363 TMEM139Q8IV31 216 aa17.41■□□□□ 0.38
CDK5RAP3-228ENST00000583363 THEM5Q8N1Q8 247 aa17.41■□□□□ 0.38
CDK5RAP3-228ENST00000583363 HEXIM2Q96MH2 286 aaKnown RBP17.41■□□□□ 0.38
CDK5RAP3-228ENST00000583363 BAG1Q99933 345 aaPredicted RBP17.41■□□□□ 0.38
CDK5RAP3-228ENST00000583363 ACBD6Q9BR61 282 aa17.41■□□□□ 0.38
CDK5RAP3-228ENST00000583363 TTPALQ9BTX7 342 aa17.41■□□□□ 0.38
CDK5RAP3-228ENST00000583363 PLVAPQ9BX97 442 aa17.41■□□□□ 0.38
CDK5RAP3-228ENST00000583363 CHST7Q9NS84 486 aa17.41■□□□□ 0.38
CDK5RAP3-228ENST00000583363 ARHGAP20Q9P2F6 1191 aa17.41■□□□□ 0.38
CDK5RAP3-228ENST00000583363 RWDD3Q9Y3V2 267 aa17.41■□□□□ 0.38
CDK5RAP3-228ENST00000583363 FGF18O76093 207 aa17.4■□□□□ 0.38
CDK5RAP3-228ENST00000583363 SOD2P04179 222 aa17.4■□□□□ 0.38
CDK5RAP3-228ENST00000583363 PLEKP08567 350 aaPredicted RBP17.4■□□□□ 0.38
CDK5RAP3-228ENST00000583363 VDRP11473 427 aa17.4■□□□□ 0.38
CDK5RAP3-228ENST00000583363 TAP1Q03518 808 aa17.4■□□□□ 0.38
CDK5RAP3-228ENST00000583363 KRT17Q04695 432 aa17.4■□□□□ 0.38
CDK5RAP3-228ENST00000583363 YWHAHQ04917 246 aaPredicted RBP17.4■□□□□ 0.38
CDK5RAP3-228ENST00000583363 MAPK8IP2Q13387 824 aaPredicted RBP17.4■□□□□ 0.38
CDK5RAP3-228ENST00000583363 ORC1Q13415 861 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms