RNA–Protein interactions for RNA: ENST00000581204.1

SUPT4H1-206, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-206ENST00000581204 INTS13Q9NVM9 706 aa9.14□□□□□ -0.95
SUPT4H1-206ENST00000581204 HSPBP1Q9NZL4 362 aa9.14□□□□□ -0.95
SUPT4H1-206ENST00000581204 HDAC6Q9UBN7 1215 aa9.14□□□□□ -0.95
SUPT4H1-206ENST00000581204 PCDHGC5Q9Y5F6 944 aa9.14□□□□□ -0.95
SUPT4H1-206ENST00000581204 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.14□□□□□ -0.95
SUPT4H1-206ENST00000581204 ASPMQ8IZT6 3477 aa9.14□□□□□ -0.95
SUPT4H1-206ENST00000581204 A0A087WZ62 844 aa9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 SMIM35A0A1B0GVV1 85 aa9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 GOLGA8IPA6NC78 632 aa9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 GOLGA8JA6NMD2 632 aa9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 GRM6O15303 877 aa9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 EFCAB14O75071 495 aa9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 GLP2RO95838 553 aa9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 RECKO95980 971 aa9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 CKBP12277 381 aa9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 GARTP22102 1010 aa9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 NLRP11P59045 1033 aaKnown RBP9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 PTENP60484 403 aa9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 CDC42EP1Q00587 391 aa9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 PTSQ03393 145 aa9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 PPP2R3AQ06190 1150 aa9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 CAMK1Q14012 370 aa9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 TSNAXIP1Q2TAA8 658 aa9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 MIIPQ5JXC2 388 aa9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 CDCA2Q69YH5 1023 aaPredicted RBP9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 GDF6Q6KF10 455 aaPredicted RBP9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 TRIM59Q8IWR1 403 aa9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 KIAA0319LQ8IZA0 1049 aa9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 FDXACB1Q9BRP7 624 aaPredicted RBP9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 TCHPQ9BT92 498 aa9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 TARS2Q9BW92 718 aaKnown RBP9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 PHF7Q9BWX1 381 aaPredicted RBP9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 ZCCHC2Q9C0B9 1178 aaKnown RBP9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 NUCKS1Q9H1E3 243 aaKnown RBP9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 DMAC2Q9NW81 257 aa9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 ABI2Q9NYB9 513 aaPredicted RBP9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 ANKFY1Q9P2R3 1169 aa9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 VTI1BQ9UEU0 232 aa9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 GINS2Q9Y248 185 aa9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 USP15Q9Y4E8 981 aaPredicted RBP9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 SPEGQ15772 3267 aa9.13□□□□□ -0.95
SUPT4H1-206ENST00000581204 CEP250Q9BV73 2442 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 A0A1W2PQC6 194 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 MBLAC1A4D2B0 266 aaPredicted RBP9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 SLC35F4A4IF30 521 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 SCAMP3O14828 347 aaKnown RBP9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 KIAA0391O15091 583 aaKnown RBP9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 CLDN3O15551 220 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 NRDCO43847 1150 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 ERLIN2O94905 339 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 PIGRP01833 764 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 AFPP02771 609 aaKnown RBP9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 POU5F1BQ06416 359 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 TMEM62Q0P6H9 643 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 PRPF4BQ13523 1007 aaKnown RBP9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 TRIM14Q14142 442 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 IKBKEQ14164 716 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 SYCP1Q15431 976 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 PTGISQ16647 500 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 TRIM71Q2Q1W2 868 aaKnown RBP9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 HS1BP3Q53T59 392 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 ZPBP2Q6X784 338 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 INTS8Q75QN2 995 aaKnown RBP9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 USP37Q86T82 979 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 ZNF410Q86VK4 478 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 SESTD1Q86VW0 696 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 GPD1LQ8N335 351 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 LINC01465Q8N7H1 131 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 CCDC150Q8NCX0 1101 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 TMEM174Q8WUU8 243 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 CPLX3Q8WVH0 158 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 DNAJB3Q8WWF6 145 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 SUSD6Q92537 303 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 KCNN1Q92952 543 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 WNT8BQ93098 351 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 SAAL1Q96ER3 474 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 MSTO1Q9BUK6 570 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 NFKBIZQ9BYH8 718 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 GCOM2Q9BZD3 368 aaPredicted RBP9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 CCDC113Q9H0I3 377 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 LMAN2LQ9H0V9 348 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 MMRN2Q9H8L6 949 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 KIAA1586Q9HCI6 787 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 PRMT7Q9NVM4 692 aaPredicted RBP9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 AGO2Q9UKV8 859 aaKnown RBP9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 USP20Q9Y2K6 914 aa9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 EP300Q09472 2414 aaPredicted RBP9.12□□□□□ -0.95
SUPT4H1-206ENST00000581204 ITIH6Q6UXX5 1313 aa9.11□□□□□ -0.95
SUPT4H1-206ENST00000581204 A6NHS1 94 aa9.11□□□□□ -0.95
SUPT4H1-206ENST00000581204 ZNF233A6NK53 670 aa9.11□□□□□ -0.95
SUPT4H1-206ENST00000581204 M0QZ92 97 aa9.11□□□□□ -0.95
SUPT4H1-206ENST00000581204 ACKR2O00590 384 aa9.11□□□□□ -0.95
SUPT4H1-206ENST00000581204 MAPK13O15264 365 aa9.11□□□□□ -0.95
SUPT4H1-206ENST00000581204 ST8SIA5O15466 376 aa9.11□□□□□ -0.95
SUPT4H1-206ENST00000581204 EFSO43281 561 aa9.11□□□□□ -0.95
SUPT4H1-206ENST00000581204 EXTL3O43909 919 aa9.11□□□□□ -0.95
SUPT4H1-206ENST00000581204 TOM1L1O75674 476 aa9.11□□□□□ -0.95
SUPT4H1-206ENST00000581204 PARNO95453 639 aaKnown RBP9.11□□□□□ -0.95
SUPT4H1-206ENST00000581204 LDHAP00338 332 aaKnown RBP9.11□□□□□ -0.95
SUPT4H1-206ENST00000581204 HARSP12081 509 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms