RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 ARHGAP15Q53QZ3 475 aa13.57□□□□□ -0.24
SMARCD2-207ENST00000578234 RALGPS2Q86X27 583 aaPredicted RBP13.57□□□□□ -0.24
SMARCD2-207ENST00000578234 METTL23Q86XA0 190 aa13.57□□□□□ -0.24
SMARCD2-207ENST00000578234 NT5DC4Q86YG4 428 aa13.57□□□□□ -0.24
SMARCD2-207ENST00000578234 THEM5Q8N1Q8 247 aa13.57□□□□□ -0.24
SMARCD2-207ENST00000578234 SPEM1Q8N4L4 309 aa13.57□□□□□ -0.24
SMARCD2-207ENST00000578234 CELF5Q8N6W0 485 aaKnown RBP13.57□□□□□ -0.24
SMARCD2-207ENST00000578234 TTC16Q8NEE8 873 aa13.57□□□□□ -0.24
SMARCD2-207ENST00000578234 C2orf15Q8WU43 125 aaKnown RBP13.57□□□□□ -0.24
SMARCD2-207ENST00000578234 HVCN1Q96D96 273 aa13.57□□□□□ -0.24
SMARCD2-207ENST00000578234 ZNF396Q96N95 335 aaPredicted RBP13.57□□□□□ -0.24
SMARCD2-207ENST00000578234 DPP3Q9NY33 737 aa13.57□□□□□ -0.24
SMARCD2-207ENST00000578234 KIF26AQ9ULI4 1882 aaPredicted RBP13.57□□□□□ -0.24
SMARCD2-207ENST00000578234 TCHHQ07283 1943 aa13.56□□□□□ -0.24
SMARCD2-207ENST00000578234 MYBPHLA2RUH7 354 aa13.56□□□□□ -0.24
SMARCD2-207ENST00000578234 PRR5-ARHGAP8B1AHC4 643 aa13.56□□□□□ -0.24
SMARCD2-207ENST00000578234 PPP1R37O75864 691 aa13.56□□□□□ -0.24
SMARCD2-207ENST00000578234 ATF6P18850 670 aa13.56□□□□□ -0.24
SMARCD2-207ENST00000578234 ARHGAP8P85298 464 aa13.56□□□□□ -0.24
SMARCD2-207ENST00000578234 LMNB2Q03252 620 aa13.56□□□□□ -0.24
SMARCD2-207ENST00000578234 DNM1Q05193 864 aaKnown RBP13.56□□□□□ -0.24
SMARCD2-207ENST00000578234 SIM2Q14190 667 aaPredicted RBP13.56□□□□□ -0.24
SMARCD2-207ENST00000578234 LRRC32Q14392 662 aa13.56□□□□□ -0.24
SMARCD2-207ENST00000578234 GAS6Q14393 721 aa13.56□□□□□ -0.24
SMARCD2-207ENST00000578234 VEPH1Q14D04 833 aa13.56□□□□□ -0.24
SMARCD2-207ENST00000578234 STK38Q15208 465 aa13.56□□□□□ -0.24
SMARCD2-207ENST00000578234 SLC39A12Q504Y0 691 aa13.56□□□□□ -0.24
SMARCD2-207ENST00000578234 GPR158Q5T848 1215 aa13.56□□□□□ -0.24
SMARCD2-207ENST00000578234 CRELD2Q6UXH1 353 aaPredicted RBP13.56□□□□□ -0.24
SMARCD2-207ENST00000578234 CEP68Q76N32 757 aa13.56□□□□□ -0.24
SMARCD2-207ENST00000578234 DYMQ7RTS9 669 aa13.56□□□□□ -0.24
SMARCD2-207ENST00000578234 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.56□□□□□ -0.24
SMARCD2-207ENST00000578234 SPPL2BQ8TCT7 592 aa13.56□□□□□ -0.24
SMARCD2-207ENST00000578234 EPSTI1Q96J88 318 aa13.56□□□□□ -0.24
SMARCD2-207ENST00000578234 LRRC3BQ96PB8 259 aa13.56□□□□□ -0.24
SMARCD2-207ENST00000578234 PYM1Q9BRP8 204 aaKnown RBP13.56□□□□□ -0.24
SMARCD2-207ENST00000578234 STRA6Q9BX79 667 aa13.56□□□□□ -0.24
SMARCD2-207ENST00000578234 TASP1Q9H6P5 420 aa13.56□□□□□ -0.24
SMARCD2-207ENST00000578234 RBM12Q9NTZ6 932 aaKnown RBP13.56□□□□□ -0.24
SMARCD2-207ENST00000578234 SEL1LQ9UBV2 794 aa13.56□□□□□ -0.24
SMARCD2-207ENST00000578234 STK17AQ9UEE5 414 aa13.56□□□□□ -0.24
SMARCD2-207ENST00000578234 ZMYM5Q9UJ78 669 aa13.56□□□□□ -0.24
SMARCD2-207ENST00000578234 TSC2P49815 1807 aa13.55□□□□□ -0.24
SMARCD2-207ENST00000578234 NUP210Q8TEM1 1887 aaPredicted RBP13.55□□□□□ -0.24
SMARCD2-207ENST00000578234 KPNA7A9QM74 516 aa13.55□□□□□ -0.24
SMARCD2-207ENST00000578234 CHURC1-FNTBB4DL54 471 aa13.55□□□□□ -0.24
SMARCD2-207ENST00000578234 SPECC1L-ADORA2AF8WAN1 911 aa13.55□□□□□ -0.24
SMARCD2-207ENST00000578234 IL18RAPO95256 599 aa13.55□□□□□ -0.24
SMARCD2-207ENST00000578234 PAPSS2O95340 614 aaPredicted RBP13.55□□□□□ -0.24
SMARCD2-207ENST00000578234 TGM1P22735 817 aa13.55□□□□□ -0.24
SMARCD2-207ENST00000578234 CDC25CP30307 473 aa13.55□□□□□ -0.24
SMARCD2-207ENST00000578234 ADSSP30520 456 aa13.55□□□□□ -0.24
SMARCD2-207ENST00000578234 CTHP32929 405 aa13.55□□□□□ -0.24
SMARCD2-207ENST00000578234 FNTBP49356 437 aa13.55□□□□□ -0.24
SMARCD2-207ENST00000578234 PLCB2Q00722 1185 aa13.55□□□□□ -0.24
SMARCD2-207ENST00000578234 SATB1Q01826 763 aa13.55□□□□□ -0.24
SMARCD2-207ENST00000578234 MGAT5BQ3V5L5 792 aa13.55□□□□□ -0.24
SMARCD2-207ENST00000578234 SV2CQ496J9 727 aa13.55□□□□□ -0.24
SMARCD2-207ENST00000578234 DGKKQ5KSL6 1271 aa13.55□□□□□ -0.24
SMARCD2-207ENST00000578234 WSCD1Q658N2 575 aa13.55□□□□□ -0.24
SMARCD2-207ENST00000578234 USP49Q70CQ1 688 aa13.55□□□□□ -0.24
SMARCD2-207ENST00000578234 LRRTM3Q86VH5 581 aa13.55□□□□□ -0.24
SMARCD2-207ENST00000578234 SFR1Q86XK3 245 aa13.55□□□□□ -0.24
SMARCD2-207ENST00000578234 BPIFB1Q8TDL5 484 aa13.55□□□□□ -0.24
SMARCD2-207ENST00000578234 POMGNT1Q8WZA1 660 aa13.55□□□□□ -0.24
SMARCD2-207ENST00000578234 ZFYVE19Q96K21 471 aa13.55□□□□□ -0.24
SMARCD2-207ENST00000578234 CLIC6Q96NY7 704 aa13.55□□□□□ -0.24
SMARCD2-207ENST00000578234 GCNAQ96QF7 691 aa13.55□□□□□ -0.24
SMARCD2-207ENST00000578234 SEPT5Q99719 369 aaPredicted RBP13.55□□□□□ -0.24
SMARCD2-207ENST00000578234 LPIN3Q9BQK8 851 aa13.55□□□□□ -0.24
SMARCD2-207ENST00000578234 IL21Q9HBE4 155 aa13.55□□□□□ -0.24
SMARCD2-207ENST00000578234 GTSE1Q9NYZ3 720 aa13.55□□□□□ -0.24
SMARCD2-207ENST00000578234 CCDC39Q9UFE4 941 aa13.55□□□□□ -0.24
SMARCD2-207ENST00000578234 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.54□□□□□ -0.24
SMARCD2-207ENST00000578234 PRAMEF12O95522 483 aa13.54□□□□□ -0.24
SMARCD2-207ENST00000578234 HAPLN1P10915 354 aaPredicted RBP13.54□□□□□ -0.24
SMARCD2-207ENST00000578234 GAP43P17677 238 aa13.54□□□□□ -0.24
SMARCD2-207ENST00000578234 CNR2P34972 360 aa13.54□□□□□ -0.24
SMARCD2-207ENST00000578234 PNPLA4P41247 253 aa13.54□□□□□ -0.24
SMARCD2-207ENST00000578234 SRSF5Q13243 272 aaKnown RBP13.54□□□□□ -0.24
SMARCD2-207ENST00000578234 PON2Q15165 354 aa13.54□□□□□ -0.24
SMARCD2-207ENST00000578234 LAIR1Q6GTX8 287 aa13.54□□□□□ -0.24
SMARCD2-207ENST00000578234 TXNDC11Q6PKC3 985 aa13.54□□□□□ -0.24
SMARCD2-207ENST00000578234 SV2BQ7L1I2 683 aa13.54□□□□□ -0.24
SMARCD2-207ENST00000578234 EFCAB13Q8IY85 973 aa13.54□□□□□ -0.24
SMARCD2-207ENST00000578234 DCP1BQ8IZD4 617 aaKnown RBP13.54□□□□□ -0.24
SMARCD2-207ENST00000578234 DNAJC19Q96DA6 116 aa13.54□□□□□ -0.24
SMARCD2-207ENST00000578234 CNTNAP3BQ96NU0 1288 aa13.54□□□□□ -0.24
SMARCD2-207ENST00000578234 SLC46A2Q9BY10 475 aa13.54□□□□□ -0.24
SMARCD2-207ENST00000578234 CNTNAP3Q9BZ76 1288 aa13.54□□□□□ -0.24
SMARCD2-207ENST00000578234 IKZF4Q9H2S9 585 aa13.54□□□□□ -0.24
SMARCD2-207ENST00000578234 MRPL44Q9H9J2 332 aaKnown RBP13.54□□□□□ -0.24
SMARCD2-207ENST00000578234 THG1LQ9NWX6 298 aaKnown RBP13.54□□□□□ -0.24
SMARCD2-207ENST00000578234 FBXO2Q9UK22 296 aaPredicted RBP13.54□□□□□ -0.24
SMARCD2-207ENST00000578234 EXOC7Q9UPT5 735 aa13.54□□□□□ -0.24
SMARCD2-207ENST00000578234 SRPRBQ9Y5M8 271 aaKnown RBP13.54□□□□□ -0.24
SMARCD2-207ENST00000578234 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.54□□□□□ -0.24
SMARCD2-207ENST00000578234 SOBPA7XYQ1 873 aa13.53□□□□□ -0.24
SMARCD2-207ENST00000578234 LDHAP00338 332 aaKnown RBP13.53□□□□□ -0.24
SMARCD2-207ENST00000578234 HOXA6P31267 233 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms