RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 CCDC105Q8IYK2 499 aa10.79□□□□□ -0.68
CRLF3-202ENST00000577725 KIAA1524Q8TCG1 905 aa10.79□□□□□ -0.68
CRLF3-202ENST00000577725 ZFP42Q96MM3 310 aa10.79□□□□□ -0.68
CRLF3-202ENST00000577725 STK33Q9BYT3 514 aa10.79□□□□□ -0.68
CRLF3-202ENST00000577725 ASB7Q9H672 318 aa10.79□□□□□ -0.68
CRLF3-202ENST00000577725 CHST12Q9NRB3 414 aa10.79□□□□□ -0.68
CRLF3-202ENST00000577725 C1orf112Q9NSG2 853 aa10.79□□□□□ -0.68
CRLF3-202ENST00000577725 DPP3Q9NY33 737 aa10.79□□□□□ -0.68
CRLF3-202ENST00000577725 ARHGAP20Q9P2F6 1191 aa10.79□□□□□ -0.68
CRLF3-202ENST00000577725 AGAP1Q9UPQ3 857 aa10.79□□□□□ -0.68
CRLF3-202ENST00000577725 NUB1Q9Y5A7 615 aa10.79□□□□□ -0.68
CRLF3-202ENST00000577725 EP300Q09472 2414 aaPredicted RBP10.79□□□□□ -0.68
CRLF3-202ENST00000577725 FAM208BQ5VWN6 2430 aa10.79□□□□□ -0.68
CRLF3-202ENST00000577725 A0A0U1RQJ8 604 aa10.78□□□□□ -0.68
CRLF3-202ENST00000577725 ARHGAP6O43182 974 aa10.78□□□□□ -0.68
CRLF3-202ENST00000577725 HNRNPH3P31942 346 aaKnown RBP10.78□□□□□ -0.68
CRLF3-202ENST00000577725 SOX5P35711 763 aa10.78□□□□□ -0.68
CRLF3-202ENST00000577725 STAT1P42224 750 aa10.78□□□□□ -0.68
CRLF3-202ENST00000577725 RAP1GAPP47736 663 aa10.78□□□□□ -0.68
CRLF3-202ENST00000577725 KLHL30Q0D2K2 578 aa10.78□□□□□ -0.68
CRLF3-202ENST00000577725 HGSNATQ68CP4 663 aa10.78□□□□□ -0.68
CRLF3-202ENST00000577725 ALKAL1Q6UXT8 129 aa10.78□□□□□ -0.68
CRLF3-202ENST00000577725 RTN4RL1Q86UN2 441 aaPredicted RBP10.78□□□□□ -0.68
CRLF3-202ENST00000577725 DCLK2Q8N568 766 aa10.78□□□□□ -0.68
CRLF3-202ENST00000577725 CXorf38Q8TB03 319 aa10.78□□□□□ -0.68
CRLF3-202ENST00000577725 ATRIPQ8WXE1 791 aa10.78□□□□□ -0.68
CRLF3-202ENST00000577725 SUSD6Q92537 303 aa10.78□□□□□ -0.68
CRLF3-202ENST00000577725 TOP1MTQ969P6 601 aa10.78□□□□□ -0.68
CRLF3-202ENST00000577725 GAD1Q99259 594 aa10.78□□□□□ -0.68
CRLF3-202ENST00000577725 IFIH1Q9BYX4 1025 aaKnown RBP10.78□□□□□ -0.68
CRLF3-202ENST00000577725 NHEJ1Q9H9Q4 299 aaPredicted RBP10.78□□□□□ -0.68
CRLF3-202ENST00000577725 GOLGA2P5Q9HBQ8 144 aa10.78□□□□□ -0.68
CRLF3-202ENST00000577725 SPTLC3Q9NUV7 552 aa10.78□□□□□ -0.68
CRLF3-202ENST00000577725 MIOSQ9NXC5 875 aa10.78□□□□□ -0.68
CRLF3-202ENST00000577725 CNTN3Q9P232 1028 aa10.78□□□□□ -0.68
CRLF3-202ENST00000577725 CACNG4Q9UBN1 327 aa10.78□□□□□ -0.68
CRLF3-202ENST00000577725 FBXL5Q9UKA1 691 aa10.78□□□□□ -0.68
CRLF3-202ENST00000577725 BARX2Q9UMQ3 279 aaPredicted RBP10.78□□□□□ -0.68
CRLF3-202ENST00000577725 PLAGL2Q9UPG8 496 aa10.78□□□□□ -0.68
CRLF3-202ENST00000577725 RWDD3Q9Y3V2 267 aa10.78□□□□□ -0.68
CRLF3-202ENST00000577725 R4GN57 208 aa10.78□□□□□ -0.68
CRLF3-202ENST00000577725 SMIM28A0A1B0GU29 152 aa10.77□□□□□ -0.69
CRLF3-202ENST00000577725 PTGESO14684 152 aa10.77□□□□□ -0.69
CRLF3-202ENST00000577725 ZC3H11AO75152 810 aaKnown RBP eCLIP10.77□□□□□ -0.69
CRLF3-202ENST00000577725 CSPG5O95196 566 aa10.77□□□□□ -0.69
CRLF3-202ENST00000577725 ASS1P00966 412 aaKnown RBP10.77□□□□□ -0.69
CRLF3-202ENST00000577725 SERPING1P05155 500 aa10.77□□□□□ -0.69
CRLF3-202ENST00000577725 KRT5P13647 590 aa10.77□□□□□ -0.69
CRLF3-202ENST00000577725 AOC1P19801 751 aa10.77□□□□□ -0.69
CRLF3-202ENST00000577725 BMPR1AP36894 532 aa10.77□□□□□ -0.69
CRLF3-202ENST00000577725 MLH1P40692 756 aa10.77□□□□□ -0.69
CRLF3-202ENST00000577725 AFF1P51825 1210 aaKnown RBP10.77□□□□□ -0.69
CRLF3-202ENST00000577725 MFAP3P55082 362 aa10.77□□□□□ -0.69
CRLF3-202ENST00000577725 POU5F1Q01860 360 aaKnown RBP10.77□□□□□ -0.69
CRLF3-202ENST00000577725 SOX4Q06945 474 aaPredicted RBP10.77□□□□□ -0.69
CRLF3-202ENST00000577725 CUL2Q13617 745 aa10.77□□□□□ -0.69
CRLF3-202ENST00000577725 ZC3H14Q6PJT7 736 aaKnown RBP10.77□□□□□ -0.69
CRLF3-202ENST00000577725 AGMOQ6ZNB7 445 aa10.77□□□□□ -0.69
CRLF3-202ENST00000577725 ZNF571Q7Z3V5 609 aaPredicted RBP10.77□□□□□ -0.69
CRLF3-202ENST00000577725 IRF2BP2Q7Z5L9 587 aa10.77□□□□□ -0.69
CRLF3-202ENST00000577725 MRPL10Q7Z7H8 261 aaKnown RBP10.77□□□□□ -0.69
CRLF3-202ENST00000577725 ECHDC2Q86YB7 292 aa10.77□□□□□ -0.69
CRLF3-202ENST00000577725 CD302Q8IX05 232 aa10.77□□□□□ -0.69
CRLF3-202ENST00000577725 FIBCD1Q8N539 461 aa10.77□□□□□ -0.69
CRLF3-202ENST00000577725 DBF4BQ8NFT6 615 aa10.77□□□□□ -0.69
CRLF3-202ENST00000577725 BEST2Q8NFU1 509 aa10.77□□□□□ -0.69
CRLF3-202ENST00000577725 SLC20A1Q8WUM9 679 aa10.77□□□□□ -0.69
CRLF3-202ENST00000577725 SYN2Q92777 582 aaPredicted RBP10.77□□□□□ -0.69
CRLF3-202ENST00000577725 XYLT2Q9H1B5 865 aa10.77□□□□□ -0.69
CRLF3-202ENST00000577725 HAUS4Q9H6D7 363 aa10.77□□□□□ -0.69
CRLF3-202ENST00000577725 SMYD3Q9H7B4 428 aa10.77□□□□□ -0.69
CRLF3-202ENST00000577725 PLEKHA5Q9HAU0 1116 aa10.77□□□□□ -0.69
CRLF3-202ENST00000577725 ACP6Q9NPH0 428 aa10.77□□□□□ -0.69
CRLF3-202ENST00000577725 RRAGDQ9NQL2 400 aaPredicted RBP10.77□□□□□ -0.69
CRLF3-202ENST00000577725 AIPL1Q9NZN9 384 aa10.77□□□□□ -0.69
CRLF3-202ENST00000577725 NXF1Q9UBU9 619 aaKnown RBP10.77□□□□□ -0.69
CRLF3-202ENST00000577725 CDV3Q9UKY7 258 aaKnown RBP10.77□□□□□ -0.69
CRLF3-202ENST00000577725 TFR2Q9UP52 801 aa10.77□□□□□ -0.69
CRLF3-202ENST00000577725 INPP5FQ9Y2H2 1132 aa10.77□□□□□ -0.69
CRLF3-202ENST00000577725 REXO2Q9Y3B8 237 aaKnown RBP10.77□□□□□ -0.69
CRLF3-202ENST00000577725 C2CD2Q9Y426 696 aa10.77□□□□□ -0.69
CRLF3-202ENST00000577725 SQORQ9Y6N5 450 aa10.77□□□□□ -0.69
CRLF3-202ENST00000577725 FASNP49327 2511 aaKnown RBP10.77□□□□□ -0.69
CRLF3-202ENST00000577725 DCDC2BA2VCK2 349 aa10.76□□□□□ -0.69
CRLF3-202ENST00000577725 CYP26A1O43174 497 aa10.76□□□□□ -0.69
CRLF3-202ENST00000577725 KCNE1P15382 129 aa10.76□□□□□ -0.69
CRLF3-202ENST00000577725 FERP16591 822 aa10.76□□□□□ -0.69
CRLF3-202ENST00000577725 CD58P19256 250 aa10.76□□□□□ -0.69
CRLF3-202ENST00000577725 RFX1P22670 979 aa10.76□□□□□ -0.69
CRLF3-202ENST00000577725 SCNN1GP51170 649 aa10.76□□□□□ -0.69
CRLF3-202ENST00000577725 RBP5P82980 135 aa10.76□□□□□ -0.69
CRLF3-202ENST00000577725 CDK17Q00537 523 aa10.76□□□□□ -0.69
CRLF3-202ENST00000577725 ZBTB6Q15916 424 aa10.76□□□□□ -0.69
CRLF3-202ENST00000577725 XKR4Q5GH76 650 aa10.76□□□□□ -0.69
CRLF3-202ENST00000577725 TAF3Q5VWG9 929 aa10.76□□□□□ -0.69
CRLF3-202ENST00000577725 CWF19L1Q69YN2 538 aaKnown RBP10.76□□□□□ -0.69
CRLF3-202ENST00000577725 DNAAF5Q86Y56 855 aa10.76□□□□□ -0.69
CRLF3-202ENST00000577725 HACE1Q8IYU2 909 aa10.76□□□□□ -0.69
CRLF3-202ENST00000577725 CCAR2Q8N163 923 aaKnown RBP10.76□□□□□ -0.69
CRLF3-202ENST00000577725 DTWD2Q8NBA8 298 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms