RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 NOP14P78316 857 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 TRIM14Q14142 442 aa11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 BTG3Q14201 252 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 SV2CQ496J9 727 aa11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 GPR65Q8IYL9 337 aa11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 TTC39CQ8N584 583 aa11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 TOP6BLQ8N6T0 577 aa11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 UBR7Q8N806 425 aa11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 CCDC150Q8NCX0 1101 aa11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 C3orf58Q8NDZ4 430 aa11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 TATDN2Q93075 761 aa11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 PDLIM2Q96JY6 352 aa11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 FAM84AQ96KN4 292 aa11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 SUSD3Q96L08 255 aa11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 NT5C1BQ96P26 610 aa11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 YME1L1Q96TA2 773 aa11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 CRACR2AQ9BSW2 395 aa11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 STK33Q9BYT3 514 aa11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 IMPG2Q9BZV3 1241 aa11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 GOLGA2P5Q9HBQ8 144 aa11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 IMPACTQ9P2X3 320 aa11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 RALYQ9UKM9 306 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 CAPN11Q9UMQ6 739 aa11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 FAN1Q9Y2M0 1017 aa11.93□□□□□ -0.5
CDK5RAP3-204ENST00000577664 ARHGEF37A1IGU5 675 aa11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 CASTOR2A6NHX0 329 aa11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 PES1O00541 588 aaKnown RBP11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 GABRDO14764 452 aa11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 PPEF2O14830 753 aa11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 TRAPPC3O43617 180 aa11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 B3GAT3O94766 335 aa11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 KRT19P08727 400 aa11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 P4HA1P13674 534 aa11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 ASPAP45381 313 aa11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 SLC11A1P49279 550 aa11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 MFAP3P55082 362 aa11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 PLCB3Q01970 1234 aa11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 MRPL58Q14197 206 aaKnown RBP11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 ZNF699Q32M78 642 aa11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 WDR72Q3MJ13 1102 aa11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 ZNF667Q5HYK9 610 aa11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 ASTLQ6HA08 431 aaPredicted RBP11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 FAM117BQ6P1L5 589 aa11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 KCNT2Q6UVM3 1135 aa11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 FIBCD1Q8N539 461 aa11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 PLVAPQ9BX97 442 aa11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 NIF3L1Q9GZT8 377 aa11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 MMRN2Q9H8L6 949 aa11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 AAASQ9NRG9 546 aa11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 MARCH5Q9NX47 278 aa11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 CLEC1BQ9P126 229 aa11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 CEP72Q9P209 647 aa11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 ADAM28Q9UKQ2 775 aa11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 R3HCC1Q9Y3T6 440 aaKnown RBP11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 RWDD3Q9Y3V2 267 aa11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 MRPL42Q9Y6G3 142 aaKnown RBP11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 ASPMQ8IZT6 3477 aa11.92□□□□□ -0.5
CDK5RAP3-204ENST00000577664 SYN3O14994 580 aa11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 EPHB6O15197 1021 aa11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 LINC01565O15544 149 aa11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 RB1P06400 928 aa11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 TYMPP19971 482 aa11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 ACO1P21399 889 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 IGFBP6P24592 240 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 HNRNPH3P31942 346 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 PPM1AP35813 382 aa11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 OR1G1P47890 313 aa11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 KLK7P49862 253 aa11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 CLCN5P51795 746 aa11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 JAM2P57087 298 aa11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 PLCB2Q00722 1185 aa11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 INCA1Q0VD86 236 aa11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 ELAVL2Q12926 359 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 CUL2Q13617 745 aa11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 SOWAHAQ2M3V2 549 aa11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 FMNL3Q8IVF7 1028 aa11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 SLC39A11Q8N1S5 342 aa11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 TMEM86AQ8N2M4 240 aa11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 TMEM130Q8N3G9 435 aa11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 COLGALT1Q8NBJ5 622 aa11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 NEK11Q8NG66 645 aa11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 SHC3Q92529 594 aa11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 BAP1Q92560 729 aa11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 SYN2Q92777 582 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 IGSF21Q96ID5 467 aa11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 KREMEN1Q96MU8 473 aa11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 ZNF558Q96NG5 402 aa11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 PI4K2AQ9BTU6 479 aa11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 OXCT2Q9BYC2 517 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 GPR88Q9GZN0 384 aa11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 NUCKS1Q9H1E3 243 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 UBE2TQ9NPD8 197 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 CHST7Q9NS84 486 aa11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 AIPL1Q9NZN9 384 aa11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 DSEQ9UL01 958 aa11.91□□□□□ -0.5
CDK5RAP3-204ENST00000577664 TADA2AO75478 443 aa11.9□□□□□ -0.5
CDK5RAP3-204ENST00000577664 OAZ2O95190 189 aa11.9□□□□□ -0.5
CDK5RAP3-204ENST00000577664 KIF4AO95239 1232 aa11.9□□□□□ -0.5
CDK5RAP3-204ENST00000577664 GYPCP04921 128 aa11.9□□□□□ -0.5
CDK5RAP3-204ENST00000577664 ITGB1P05556 798 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms