RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 C18orf25Q96B23 403 aaPredicted RBP30.17■■■□□ 2.42
CTDNEP1-210ENST00000574322 HMGXB4Q9UGU5 601 aa30.17■■■□□ 2.42
CTDNEP1-210ENST00000574322 SCN1AP35498 2009 aa30.17■■■□□ 2.42
CTDNEP1-210ENST00000574322 PROSCO94903 275 aa30.16■■■□□ 2.42
CTDNEP1-210ENST00000574322 ATF7P17544 494 aaPredicted RBP30.16■■■□□ 2.42
CTDNEP1-210ENST00000574322 ACLYP53396 1101 aa30.16■■■□□ 2.42
CTDNEP1-210ENST00000574322 CNGA2Q16280 664 aa30.16■■■□□ 2.42
CTDNEP1-210ENST00000574322 LONRF2Q1L5Z9 754 aa30.16■■■□□ 2.42
CTDNEP1-210ENST00000574322 C2CD6Q53TS8 623 aa30.16■■■□□ 2.42
CTDNEP1-210ENST00000574322 FAM53CQ9NYF3 392 aa30.16■■■□□ 2.42
CTDNEP1-210ENST00000574322 STIM2Q9P246 746 aa30.16■■■□□ 2.42
CTDNEP1-210ENST00000574322 DMGDHQ9UI17 866 aaKnown RBP30.16■■■□□ 2.42
CTDNEP1-210ENST00000574322 ST3GAL5Q9UNP4 418 aa30.16■■■□□ 2.42
CTDNEP1-210ENST00000574322 CAPN2P17655 700 aa30.16■■■□□ 2.42
CTDNEP1-210ENST00000574322 TNFRSF8P28908 595 aa30.16■■■□□ 2.42
CTDNEP1-210ENST00000574322 TWF2Q6IBS0 349 aaKnown RBP30.16■■■□□ 2.42
CTDNEP1-210ENST00000574322 DENND1BQ6P3S1 775 aa30.16■■■□□ 2.42
CTDNEP1-210ENST00000574322 CCNI2Q6ZMN8 369 aaPredicted RBP30.16■■■□□ 2.42
CTDNEP1-210ENST00000574322 FEZF2Q8TBJ5 459 aa30.16■■■□□ 2.42
CTDNEP1-210ENST00000574322 HDAC7Q8WUI4 952 aa30.16■■■□□ 2.42
CTDNEP1-210ENST00000574322 APOL6Q9BWW8 343 aa30.16■■■□□ 2.42
CTDNEP1-210ENST00000574322 PARP2Q9UGN5 583 aa30.16■■■□□ 2.42
CTDNEP1-210ENST00000574322 SEC31AO94979 1220 aaKnown RBP30.15■■■□□ 2.42
CTDNEP1-210ENST00000574322 FGGP02679 453 aa30.15■■■□□ 2.42
CTDNEP1-210ENST00000574322 MAN1A1P33908 653 aa30.15■■■□□ 2.42
CTDNEP1-210ENST00000574322 GSCP56915 257 aaPredicted RBP30.15■■■□□ 2.42
CTDNEP1-210ENST00000574322 TAP1Q03518 808 aa30.15■■■□□ 2.42
CTDNEP1-210ENST00000574322 LLGL2Q6P1M3 1020 aa30.15■■■□□ 2.42
CTDNEP1-210ENST00000574322 ERICH1Q86X53 443 aa30.15■■■□□ 2.42
CTDNEP1-210ENST00000574322 TRIM7Q9C029 511 aa30.15■■■□□ 2.42
CTDNEP1-210ENST00000574322 STRIP2Q9ULQ0 834 aa30.15■■■□□ 2.42
CTDNEP1-210ENST00000574322 L1RE1Q9UN81 338 aa30.15■■■□□ 2.42
CTDNEP1-210ENST00000574322 WDR3Q9UNX4 943 aaKnown RBP eCLIP30.15■■■□□ 2.42
CTDNEP1-210ENST00000574322 KRIT1O00522 736 aa30.14■■■□□ 2.42
CTDNEP1-210ENST00000574322 PPEF2O14830 753 aa30.14■■■□□ 2.42
CTDNEP1-210ENST00000574322 PNPLA4P41247 253 aa30.14■■■□□ 2.42
CTDNEP1-210ENST00000574322 MARCKSL1P49006 195 aa30.14■■■□□ 2.42
CTDNEP1-210ENST00000574322 NDST1P52848 882 aa30.14■■■□□ 2.42
CTDNEP1-210ENST00000574322 PPP2R5EQ16537 467 aa30.14■■■□□ 2.42
CTDNEP1-210ENST00000574322 PTGISQ16647 500 aa30.14■■■□□ 2.42
CTDNEP1-210ENST00000574322 GLRA4Q5JXX5 417 aa30.14■■■□□ 2.42
CTDNEP1-210ENST00000574322 ANKLE1Q8NAG6 615 aa30.14■■■□□ 2.42
CTDNEP1-210ENST00000574322 KRT12Q99456 494 aa30.14■■■□□ 2.42
CTDNEP1-210ENST00000574322 NT5C1AQ9BXI3 368 aa30.14■■■□□ 2.42
CTDNEP1-210ENST00000574322 PHF24Q9UPV7 400 aa30.14■■■□□ 2.42
CTDNEP1-210ENST00000574322 KIAA0100Q14667 2235 aaKnown RBP30.14■■■□□ 2.42
CTDNEP1-210ENST00000574322 PTK7Q13308 1070 aa30.13■■■□□ 2.41
CTDNEP1-210ENST00000574322 MAP9Q49MG5 647 aa30.13■■■□□ 2.41
CTDNEP1-210ENST00000574322 PPP1R15BQ5SWA1 713 aa30.13■■■□□ 2.41
CTDNEP1-210ENST00000574322 FUT8Q9BYC5 575 aa30.13■■■□□ 2.41
CTDNEP1-210ENST00000574322 GDAP2Q9NXN4 497 aa30.13■■■□□ 2.41
CTDNEP1-210ENST00000574322 TMEM191CA6NGB0 347 aa30.13■■■□□ 2.41
CTDNEP1-210ENST00000574322 O00370 1275 aa30.13■■■□□ 2.41
CTDNEP1-210ENST00000574322 GPR182O15218 404 aa30.13■■■□□ 2.41
CTDNEP1-210ENST00000574322 RWDD2BP57060 319 aa30.13■■■□□ 2.41
CTDNEP1-210ENST00000574322 STILQ15468 1287 aa30.13■■■□□ 2.41
CTDNEP1-210ENST00000574322 SGO2Q562F6 1265 aa30.13■■■□□ 2.41
CTDNEP1-210ENST00000574322 UNC93AQ86WB7 457 aa30.13■■■□□ 2.41
CTDNEP1-210ENST00000574322 CPNE8Q86YQ8 564 aa30.13■■■□□ 2.41
CTDNEP1-210ENST00000574322 C3orf20Q8ND61 904 aa30.13■■■□□ 2.41
CTDNEP1-210ENST00000574322 ZNF560Q96MR9 790 aa30.13■■■□□ 2.41
CTDNEP1-210ENST00000574322 GLT1D1Q96MS3 346 aa30.13■■■□□ 2.41
CTDNEP1-210ENST00000574322 SLITRK6Q9H5Y7 841 aa30.13■■■□□ 2.41
CTDNEP1-210ENST00000574322 KLK14Q9P0G3 267 aa30.13■■■□□ 2.41
CTDNEP1-210ENST00000574322 SNX9Q9Y5X1 595 aa30.13■■■□□ 2.41
CTDNEP1-210ENST00000574322 ITGA7Q13683 1181 aa30.12■■■□□ 2.41
CTDNEP1-210ENST00000574322 FAM26DQ5JW98 314 aa30.12■■■□□ 2.41
CTDNEP1-210ENST00000574322 LIMS2Q7Z4I7 341 aa30.12■■■□□ 2.41
CTDNEP1-210ENST00000574322 TRAIPQ9BWF2 469 aa30.12■■■□□ 2.41
CTDNEP1-210ENST00000574322 IP6K2Q9UHH9 426 aa30.12■■■□□ 2.41
CTDNEP1-210ENST00000574322 A0A1W2PQ45 241 aaPredicted RBP30.11■■■□□ 2.41
CTDNEP1-210ENST00000574322 A0A1W2PQY0 241 aa30.11■■■□□ 2.41
CTDNEP1-210ENST00000574322 EN2P19622 333 aaPredicted RBP30.11■■■□□ 2.41
CTDNEP1-210ENST00000574322 LRPAP1P30533 357 aa30.11■■■□□ 2.41
CTDNEP1-210ENST00000574322 MNX1P50219 401 aaPredicted RBP30.11■■■□□ 2.41
CTDNEP1-210ENST00000574322 FBXO47Q5MNV8 452 aa30.11■■■□□ 2.41
CTDNEP1-210ENST00000574322 LCLAT1Q6UWP7 414 aa30.11■■■□□ 2.41
CTDNEP1-210ENST00000574322 PHLDB2Q86SQ0 1253 aa30.11■■■□□ 2.41
CTDNEP1-210ENST00000574322 GADD45GIP1Q8TAE8 222 aaPredicted RBP30.11■■■□□ 2.41
CTDNEP1-210ENST00000574322 HEXIM2Q96MH2 286 aaKnown RBP30.11■■■□□ 2.41
CTDNEP1-210ENST00000574322 AP1M1Q9BXS5 423 aa30.11■■■□□ 2.41
CTDNEP1-210ENST00000574322 ERVK-5Q9HDB9 667 aa30.11■■■□□ 2.41
CTDNEP1-210ENST00000574322 GDF3Q9NR23 364 aa30.11■■■□□ 2.41
CTDNEP1-210ENST00000574322 FAM105AQ9NUU6 356 aa30.11■■■□□ 2.41
CTDNEP1-210ENST00000574322 GTF3C5Q9Y5Q8 519 aaPredicted RBP30.11■■■□□ 2.41
CTDNEP1-210ENST00000574322 CCDC85CA6NKD9 419 aa30.1■■■□□ 2.41
CTDNEP1-210ENST00000574322 MICAL2O94851 1124 aa30.1■■■□□ 2.41
CTDNEP1-210ENST00000574322 ZNF211Q13398 564 aaPredicted RBP30.1■■■□□ 2.41
CTDNEP1-210ENST00000574322 TRIM71Q2Q1W2 868 aaKnown RBP30.1■■■□□ 2.41
CTDNEP1-210ENST00000574322 PTPN20Q4JDL3 420 aa30.1■■■□□ 2.41
CTDNEP1-210ENST00000574322 SEL1L2Q5TEA6 688 aa30.1■■■□□ 2.41
CTDNEP1-210ENST00000574322 HACE1Q8IYU2 909 aa30.1■■■□□ 2.41
CTDNEP1-210ENST00000574322 PPP1R10Q96QC0 940 aaKnown RBP30.1■■■□□ 2.41
CTDNEP1-210ENST00000574322 WDR35Q9P2L0 1181 aa30.1■■■□□ 2.41
CTDNEP1-210ENST00000574322 CYTH4Q9UIA0 394 aa30.1■■■□□ 2.41
CTDNEP1-210ENST00000574322 MAP2K7O14733 419 aa30.1■■■□□ 2.41
CTDNEP1-210ENST00000574322 SART1O43290 800 aaKnown RBP30.1■■■□□ 2.41
CTDNEP1-210ENST00000574322 CTSHP09668 335 aa30.1■■■□□ 2.41
CTDNEP1-210ENST00000574322 PYGMP11217 842 aa30.1■■■□□ 2.41
CTDNEP1-210ENST00000574322 ITGA4P13612 1032 aa30.1■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms