RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 ZNF623O75123 536 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 ERLIN1O75477 346 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 MICAL2O94851 1124 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 PROSCO94903 275 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 ZRANB2O95218 330 aaKnown RBP eCLIP6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 CTSHP09668 335 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 FAM163BP0C2L3 166 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 HSPA6P17066 643 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 GRK4P32298 578 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 MAN1A1P33908 653 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 THPOP40225 353 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 SLC1A1P43005 524 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 TAF6P49848 677 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 NDST1P52848 882 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 GSCP56915 257 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 RNASE9P60153 205 aaKnown RBP6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 VSNL1P62760 191 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 SOX4Q06945 474 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 NFX1Q12986 1120 aaKnown RBP6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 MAMLD1Q13495 774 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 LPIN1Q14693 890 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 STILQ15468 1287 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 SV2CQ496J9 727 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 SGO2Q562F6 1265 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 FBXO47Q5MNV8 452 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 PPP1R15BQ5SWA1 713 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 DCAF12L1Q5VU92 463 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 LHX8Q68G74 356 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 C8orf74Q6P047 294 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 LLGL2Q6P1M3 1020 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 CC2D1AQ6P1N0 951 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 TMCO3Q6UWJ1 677 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 LIMS2Q7Z4I7 341 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 PHLDB2Q86SQ0 1253 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 UNC93AQ86WB7 457 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 ERICH1Q86X53 443 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 CPNE8Q86YQ8 564 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 SLC43A3Q8NBI5 491 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 ZNF296Q8WUU4 475 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 ALG3Q92685 438 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 KRT35Q92764 455 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 RNPC3Q96LT9 517 aaKnown RBP6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 HEXIM2Q96MH2 286 aaKnown RBP6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 GLT1D1Q96MS3 346 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 PPP1R10Q96QC0 940 aaKnown RBP6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 NAP1L3Q99457 506 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 MRPL45Q9BRJ2 306 aaKnown RBP6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 LRRC1Q9BTT6 524 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 TRAIPQ9BWF2 469 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 NT5C1AQ9BXI3 368 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 GDAP2Q9NXN4 497 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 WDR35Q9P2L0 1181 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 HMGXB4Q9UGU5 601 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 IP6K2Q9UHH9 426 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 LCMT1Q9UIC8 334 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 STRIP2Q9ULQ0 834 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 PADI3Q9ULW8 664 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 GIT1Q9Y2X7 761 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 SNX9Q9Y5X1 595 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 SHROOM3Q8TF72 1996 aa6.51□□□□□ -1.37
TRAPPC1-204ENST00000571947 LTBP2Q14767 1821 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 KIAA1671Q9BY89 1806 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 PLXNA3P51805 1871 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 A0A1W2PQ45 241 aaPredicted RBP6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 A0A1W2PQY0 241 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 TMEM191CA6NGB0 347 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 KPNA7A9QM74 516 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 KRIT1O00522 736 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 SETSIPP0DME0 302 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 GHRP10912 638 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 SKIP12755 728 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 TNFRSF8P28908 595 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 CD52P31358 61 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 GPD2P43304 727 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 GABRB2P47870 512 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 MARCKSL1P49006 195 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 RAB27AP51159 221 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 RWDD2BP57060 319 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 PAK2Q13177 524 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 ZNF211Q13398 564 aaPredicted RBP6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 ORC1Q13415 861 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 ZNF268Q14587 947 aaPredicted RBP6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 PPP2R5EQ16537 467 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 LONRF2Q1L5Z9 754 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 SOWAHAQ2M3V2 549 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 PTPN20Q4JDL3 420 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 C2CD6Q53TS8 623 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 ZNF618Q5T7W0 954 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 SEL1L2Q5TEA6 688 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 ARHGAP17Q68EM7 881 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 DNAJC24Q6P3W2 148 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 LCLAT1Q6UWP7 414 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 CCNI2Q6ZMN8 369 aaPredicted RBP6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 DPH6Q7L8W6 267 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 HOMEZQ8IX15 550 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 CRYBG2Q8N1P7 616 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 C3orf20Q8ND61 904 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 C18orf8Q96DM3 657 aa6.5□□□□□ -1.37
TRAPPC1-204ENST00000571947 KRT12Q99456 494 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms