RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 SLITRK6Q9H5Y7 841 aa5.18□□□□□ -1.58
NUP88-202ENST00000570937 POLHQ9Y253 713 aa5.18□□□□□ -1.58
NUP88-202ENST00000570937 DMRT1Q9Y5R6 373 aa5.18□□□□□ -1.58
NUP88-202ENST00000570937 NOX1Q9Y5S8 564 aa5.18□□□□□ -1.58
NUP88-202ENST00000570937 CLSPNQ9HAW4 1339 aa5.18□□□□□ -1.58
NUP88-202ENST00000570937 AATKQ6ZMQ8 1374 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 IFT172Q9UG01 1749 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 MYADML2A6NDP7 307 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 UNC119BA6NIH7 251 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 NT5C1B-RDH14C9J2C7 533 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 SUV39H1O43463 412 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 ABLIM3O94929 683 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 RHOBTB3O94955 611 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 ARIH2O95376 493 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 GCP02774 474 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 CD1AP06126 327 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 FCER1AP12319 257 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 MALP21145 153 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 PROZP22891 400 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 HSD11B2P80365 405 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 MCL1Q07820 350 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 SNAPC2Q13487 334 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 CYP2A13Q16696 494 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 FLYWCH1Q4VC44 716 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 KHDC1Q4VXA5 237 aaKnown RBP5.17□□□□□ -1.58
NUP88-202ENST00000570937 UTP14CQ5TAP6 766 aaKnown RBP5.17□□□□□ -1.58
NUP88-202ENST00000570937 THEMIS2Q5TEJ8 643 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 FOXR2Q6PJQ5 311 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 ZNF365Q70YC5 407 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 Q8NA96 180 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 TBC1D15Q8TC07 691 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 ASB10Q8WXI3 467 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 LINC00476Q8WZB0 136 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 NACC2Q96BF6 587 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 HOOK2Q96ED9 719 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 PACSIN1Q9BY11 444 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 ALOXE3Q9BYJ1 711 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 GALNT9Q9HCQ5 603 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 RNF181Q9P0P0 153 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 HSFX1Q9UBD0 423 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 USP25Q9UHP3 1055 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 PACSIN3Q9UKS6 424 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 ANKRD6Q9Y2G4 727 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 SPATA31A6Q5VVP1 1343 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 NPHP3Q7Z494 1330 aa5.17□□□□□ -1.58
NUP88-202ENST00000570937 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.17□□□□□ -1.58
NUP88-202ENST00000570937 JCADQ9P266 1359 aa5.16□□□□□ -1.58
NUP88-202ENST00000570937 DISP3Q9P2K9 1392 aa5.16□□□□□ -1.58
NUP88-202ENST00000570937 XIRP1Q702N8 1843 aaKnown RBP5.16□□□□□ -1.58
NUP88-202ENST00000570937 MST1RQ04912 1400 aa5.16□□□□□ -1.58
NUP88-202ENST00000570937 ROBO1Q9Y6N7 1651 aa5.16□□□□□ -1.58
NUP88-202ENST00000570937 C1orf167Q5SNV9 1468 aa5.16□□□□□ -1.58
NUP88-202ENST00000570937 E2F8A0AVK6 867 aa5.16□□□□□ -1.58
NUP88-202ENST00000570937 F2RL2O00254 374 aa5.16□□□□□ -1.58
NUP88-202ENST00000570937 AGFG2O95081 481 aa5.16□□□□□ -1.58
NUP88-202ENST00000570937 IL33O95760 270 aa5.16□□□□□ -1.58
NUP88-202ENST00000570937 ANXA1P04083 346 aa5.16□□□□□ -1.58
NUP88-202ENST00000570937 FTH1P19P0C7X4 201 aa5.16□□□□□ -1.58
NUP88-202ENST00000570937 CYP2C19P33261 490 aa5.16□□□□□ -1.58
NUP88-202ENST00000570937 COL10A1Q03692 680 aa5.16□□□□□ -1.58
NUP88-202ENST00000570937 TTF1Q15361 905 aaPredicted RBP5.16□□□□□ -1.58
NUP88-202ENST00000570937 MEX3CQ5U5Q3 659 aaKnown RBP5.16□□□□□ -1.58
NUP88-202ENST00000570937 C3orf20Q8ND61 904 aa5.16□□□□□ -1.58
NUP88-202ENST00000570937 BEND2Q8NDZ0 799 aa5.16□□□□□ -1.58
NUP88-202ENST00000570937 AGAP2Q99490 1192 aa5.16□□□□□ -1.58
NUP88-202ENST00000570937 VRK1Q99986 396 aaPredicted RBP5.16□□□□□ -1.58
NUP88-202ENST00000570937 CYP4F11Q9HBI6 524 aa5.16□□□□□ -1.58
NUP88-202ENST00000570937 AASDHPPTQ9NRN7 309 aa5.16□□□□□ -1.58
NUP88-202ENST00000570937 DLC1Q96QB1 1528 aa5.16□□□□□ -1.58
NUP88-202ENST00000570937 ROCK2O75116 1388 aaKnown RBP5.16□□□□□ -1.58
NUP88-202ENST00000570937 SETD1AO15047 1707 aaKnown RBP5.15□□□□□ -1.58
NUP88-202ENST00000570937 ERN1O75460 977 aaKnown RBP5.15□□□□□ -1.59
NUP88-202ENST00000570937 HKR1P10072 659 aa5.15□□□□□ -1.59
NUP88-202ENST00000570937 AVPR1BP47901 424 aa5.15□□□□□ -1.59
NUP88-202ENST00000570937 HK3P52790 923 aa5.15□□□□□ -1.59
NUP88-202ENST00000570937 USP14P54578 494 aa5.15□□□□□ -1.59
NUP88-202ENST00000570937 PIN1Q13526 163 aaPredicted RBP5.15□□□□□ -1.59
NUP88-202ENST00000570937 HECTD2Q5U5R9 776 aa5.15□□□□□ -1.59
NUP88-202ENST00000570937 SLC4A10Q6U841 1118 aa5.15□□□□□ -1.59
NUP88-202ENST00000570937 GPR149Q86SP6 731 aa5.15□□□□□ -1.59
NUP88-202ENST00000570937 PDSS2Q86YH6 399 aa5.15□□□□□ -1.59
NUP88-202ENST00000570937 LCORLQ8N3X6 602 aa5.15□□□□□ -1.59
NUP88-202ENST00000570937 RNF31Q96EP0 1072 aa5.15□□□□□ -1.59
NUP88-202ENST00000570937 KLHL32Q96NJ5 620 aa5.15□□□□□ -1.59
NUP88-202ENST00000570937 CAMKK2Q96RR4 588 aa5.15□□□□□ -1.59
NUP88-202ENST00000570937 GNL3LQ9NVN8 582 aaKnown RBP5.15□□□□□ -1.59
NUP88-202ENST00000570937 RLIMQ9NVW2 624 aa5.15□□□□□ -1.59
NUP88-202ENST00000570937 EPN1Q9Y6I3 576 aaPredicted RBP5.15□□□□□ -1.59
NUP88-202ENST00000570937 ADGRB1O14514 1584 aa5.15□□□□□ -1.59
NUP88-202ENST00000570937 CENPJQ9HC77 1338 aaPredicted RBP5.15□□□□□ -1.59
NUP88-202ENST00000570937 PLEKHH1Q9ULM0 1364 aa5.15□□□□□ -1.59
NUP88-202ENST00000570937 ASXL1Q8IXJ9 1541 aa5.14□□□□□ -1.59
NUP88-202ENST00000570937 CDC42BPGQ6DT37 1551 aa5.14□□□□□ -1.59
NUP88-202ENST00000570937 A0A1W2PS29 197 aa5.14□□□□□ -1.59
NUP88-202ENST00000570937 ZFPL1O95159 310 aa5.14□□□□□ -1.59
NUP88-202ENST00000570937 VAV2P52735 878 aa5.14□□□□□ -1.59
NUP88-202ENST00000570937 KRTAP1-1Q07627 177 aa5.14□□□□□ -1.59
NUP88-202ENST00000570937 NOGQ13253 232 aa5.14□□□□□ -1.59
NUP88-202ENST00000570937 SP5Q6BEB4 398 aaPredicted RBP5.14□□□□□ -1.59
NUP88-202ENST00000570937 FAM90A1Q86YD7 464 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms