RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 HLA-DRAP01903 254 aa10.28□□□□□ -0.76
HCCAT5-201ENST00000569990 HNRNPA1P09651 372 aaKnown RBP eCLIP10.28□□□□□ -0.76
HCCAT5-201ENST00000569990 ELF1P32519 619 aa10.28□□□□□ -0.76
HCCAT5-201ENST00000569990 PIK3CAP42336 1068 aa10.28□□□□□ -0.76
HCCAT5-201ENST00000569990 NLRP12P59046 1061 aa10.28□□□□□ -0.76
HCCAT5-201ENST00000569990 TNNC1P63316 161 aa10.28□□□□□ -0.76
HCCAT5-201ENST00000569990 ZP2Q05996 745 aa10.28□□□□□ -0.76
HCCAT5-201ENST00000569990 ADCY1Q08828 1119 aa10.28□□□□□ -0.76
HCCAT5-201ENST00000569990 ZNF699Q32M78 642 aa10.28□□□□□ -0.76
HCCAT5-201ENST00000569990 WDR72Q3MJ13 1102 aa10.28□□□□□ -0.76
HCCAT5-201ENST00000569990 DCAF17Q5H9S7 520 aaPredicted RBP10.28□□□□□ -0.76
HCCAT5-201ENST00000569990 PPM1LQ5SGD2 360 aa10.28□□□□□ -0.76
HCCAT5-201ENST00000569990 ATAT1Q5SQI0 421 aa10.28□□□□□ -0.76
HCCAT5-201ENST00000569990 CCDC149Q6ZUS6 474 aa10.28□□□□□ -0.76
HCCAT5-201ENST00000569990 FRMD5Q7Z6J6 570 aa10.28□□□□□ -0.76
HCCAT5-201ENST00000569990 OSTM1Q86WC4 334 aa10.28□□□□□ -0.76
HCCAT5-201ENST00000569990 ADHFE1Q8IWW8 467 aa10.28□□□□□ -0.76
HCCAT5-201ENST00000569990 TAS1R2Q8TE23 839 aa10.28□□□□□ -0.76
HCCAT5-201ENST00000569990 KBTBD7Q8WVZ9 684 aa10.28□□□□□ -0.76
HCCAT5-201ENST00000569990 SMG7Q92540 1137 aaKnown RBP10.28□□□□□ -0.76
HCCAT5-201ENST00000569990 PGLYRP2Q96PD5 576 aa10.28□□□□□ -0.76
HCCAT5-201ENST00000569990 MMS19Q96T76 1030 aa10.28□□□□□ -0.76
HCCAT5-201ENST00000569990 PHF7Q9BWX1 381 aaPredicted RBP10.28□□□□□ -0.76
HCCAT5-201ENST00000569990 COL25A1Q9BXS0 654 aaPredicted RBP10.28□□□□□ -0.76
HCCAT5-201ENST00000569990 MMRN2Q9H8L6 949 aa10.28□□□□□ -0.76
HCCAT5-201ENST00000569990 CYP4F11Q9HBI6 524 aa10.28□□□□□ -0.76
HCCAT5-201ENST00000569990 METTL14Q9HCE5 456 aaKnown RBP10.28□□□□□ -0.76
HCCAT5-201ENST00000569990 DDX43Q9NXZ2 648 aaKnown RBP10.28□□□□□ -0.76
HCCAT5-201ENST00000569990 MTCL1Q9Y4B5 1905 aaKnown RBP10.27□□□□□ -0.76
HCCAT5-201ENST00000569990 TTC28Q96AY4 2481 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 MTMR11A4FU01 709 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 HCRTO43612 131 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 STX10O60499 249 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 TACC1O75410 805 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 POU2F2P09086 479 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 FAM163BP0C2L3 166 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 WARSP23381 471 aaKnown RBP10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 ACAT1P24752 427 aaKnown RBP10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 LHX1P48742 406 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 MXI1P50539 228 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 MARSP56192 900 aaKnown RBP10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 MYL7Q01449 175 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 DUSP4Q13115 394 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 SGSM1Q2NKQ1 1148 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 CCDC40Q4G0X9 1142 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 CBWD6Q4V339 395 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 SLC39A12Q504Y0 691 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 ZNF667Q5HYK9 610 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 CBWD3Q5JTY5 395 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 CBWD5Q5RIA9 395 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 CCDC183Q5T5S1 534 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 TCERG1LQ5VWI1 586 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 KRT39Q6A163 491 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 TMEM92Q6UXU6 159 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 LRRTM3Q86VH5 581 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 ATAD1Q8NBU5 361 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 TAF4BQ92750 862 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 SLC35C1Q96A29 364 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 ELMO3Q96BJ8 720 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 ACBD6Q9BR61 282 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 MRPL45Q9BRJ2 306 aaKnown RBP10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 SRRTQ9BXP5 876 aaKnown RBP10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 CRISPLD1Q9H336 500 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 NXF1Q9UBU9 619 aaKnown RBP10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 POLIQ9UNA4 740 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 NME7Q9Y5B8 376 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 INSL5Q9Y5Q6 135 aa10.27□□□□□ -0.77
HCCAT5-201ENST00000569990 TCF20Q9UGU0 1960 aaKnown RBP10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 LOC730098B7Z3J9 87 aa10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 CCL16O15467 120 aa10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 XYLBO75191 536 aa10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 LRRN2O75325 713 aa10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 CLSTN1O94985 981 aa10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 FGFR1OPO95684 399 aaKnown RBP10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 GNA14O95837 355 aa10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 LRG1P02750 347 aa10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 LMO2P25791 158 aa10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 PCSK1P29120 753 aa10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 NOP14P78316 857 aaKnown RBP10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 TSPY1Q01534 308 aa10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 SMARCB1Q12824 385 aa10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 INTS6LQ5JSJ4 861 aaKnown RBP10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 SPOPLQ6IQ16 392 aa10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 GRASPQ7Z6J2 395 aaPredicted RBP10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 TRIM59Q8IWR1 403 aa10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 DCP1BQ8IZD4 617 aaKnown RBP10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 TTC9BQ8N6N2 239 aa10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 FBXL13Q8NEE6 735 aa10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 C2orf15Q8WU43 125 aaKnown RBP10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 SEMA4DQ92854 862 aa10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 PKMYT1Q99640 499 aa10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 PI4K2AQ9BTU6 479 aa10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 IMPG2Q9BZV3 1241 aa10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 SDCBP2Q9H190 292 aa10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 SMYD3Q9H7B4 428 aa10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 PIDD1Q9HB75 910 aa10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 WDR6Q9NNW5 1121 aaKnown RBP10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 CD320Q9NPF0 282 aa10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 TMLHEQ9NVH6 421 aa10.26□□□□□ -0.77
HCCAT5-201ENST00000569990 RAB20Q9NX57 234 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms