RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-208ENST00000568515 C4orf50Q6ZRC1 276 aa22.7■■□□□ 1.22
DENND4A-208ENST00000568515 ZNF276Q8N554 614 aa22.7■■□□□ 1.22
DENND4A-208ENST00000568515 RFWD2Q8NHY2 731 aa22.7■■□□□ 1.22
DENND4A-208ENST00000568515 TMEM121Q9BTD3 319 aa22.7■■□□□ 1.22
DENND4A-208ENST00000568515 APOBEC3GQ9HC16 384 aaKnown RBP22.7■■□□□ 1.22
DENND4A-208ENST00000568515 PCDH9Q9HC56 1237 aa22.7■■□□□ 1.22
DENND4A-208ENST00000568515 RGPD3A6NKT7 1758 aaPredicted RBP22.7■■□□□ 1.22
DENND4A-208ENST00000568515 RGPD4Q7Z3J3 1758 aa22.7■■□□□ 1.22
DENND4A-208ENST00000568515 TMEM191CA6NGB0 347 aa22.69■■□□□ 1.22
DENND4A-208ENST00000568515 SGK1O00141 431 aa22.69■■□□□ 1.22
DENND4A-208ENST00000568515 NDC80O14777 642 aa22.69■■□□□ 1.22
DENND4A-208ENST00000568515 VNN1O95497 513 aa22.69■■□□□ 1.22
DENND4A-208ENST00000568515 IFNB1P01574 187 aa22.69■■□□□ 1.22
DENND4A-208ENST00000568515 PDHA1P08559 390 aa22.69■■□□□ 1.22
DENND4A-208ENST00000568515 TMEM191BP0C7N4 346 aa22.69■■□□□ 1.22
DENND4A-208ENST00000568515 GHRHRQ02643 423 aa22.69■■□□□ 1.22
DENND4A-208ENST00000568515 HIF1AQ16665 826 aa22.69■■□□□ 1.22
DENND4A-208ENST00000568515 ZC3H12AQ5D1E8 599 aaKnown RBP22.69■■□□□ 1.22
DENND4A-208ENST00000568515 RFWD3Q6PCD5 774 aa22.69■■□□□ 1.22
DENND4A-208ENST00000568515 TAS1R3Q7RTX0 852 aa22.69■■□□□ 1.22
DENND4A-208ENST00000568515 RBBP8NLQ8NC74 664 aaPredicted RBP22.69■■□□□ 1.22
DENND4A-208ENST00000568515 NKD2Q969F2 451 aaPredicted RBP22.69■■□□□ 1.22
DENND4A-208ENST00000568515 CADM1Q9BY67 442 aaKnown RBP22.69■■□□□ 1.22
DENND4A-208ENST00000568515 SPATS2LQ9NUQ6 558 aaKnown RBP22.69■■□□□ 1.22
DENND4A-208ENST00000568515 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.69■■□□□ 1.22
DENND4A-208ENST00000568515 UPP2O95045 317 aa22.69■■□□□ 1.22
DENND4A-208ENST00000568515 ITGAVP06756 1048 aa22.69■■□□□ 1.22
DENND4A-208ENST00000568515 COL11A2P13942 1736 aaPredicted RBP22.69■■□□□ 1.22
DENND4A-208ENST00000568515 CALRP27797 417 aaKnown RBP22.69■■□□□ 1.22
DENND4A-208ENST00000568515 CTCFP49711 727 aaPredicted RBP22.69■■□□□ 1.22
DENND4A-208ENST00000568515 PLCB3Q01970 1234 aa22.69■■□□□ 1.22
DENND4A-208ENST00000568515 EFTUD2Q15029 972 aaKnown RBP eCLIP22.69■■□□□ 1.221e-13■■■□□ 15.9
DENND4A-208ENST00000568515 PGM5Q15124 567 aa22.69■■□□□ 1.22
DENND4A-208ENST00000568515 KHDC1Q4VXA5 237 aaKnown RBP22.69■■□□□ 1.22
DENND4A-208ENST00000568515 LRRC38Q5VT99 294 aa22.69■■□□□ 1.22
DENND4A-208ENST00000568515 CPXCR1Q8N123 301 aa22.69■■□□□ 1.22
DENND4A-208ENST00000568515 FETUBQ9UGM5 382 aa22.69■■□□□ 1.22
DENND4A-208ENST00000568515 ENO4A6NNW6 628 aa22.68■■□□□ 1.22
DENND4A-208ENST00000568515 ABLIM1O14639 778 aa22.68■■□□□ 1.22
DENND4A-208ENST00000568515 OVGP1Q12889 678 aa22.68■■□□□ 1.22
DENND4A-208ENST00000568515 TFDP1Q14186 410 aa22.68■■□□□ 1.22
DENND4A-208ENST00000568515 PPP1R2P3Q6NXS1 205 aa22.68■■□□□ 1.22
DENND4A-208ENST00000568515 NLGN1Q8N2Q7 840 aa22.68■■□□□ 1.22
DENND4A-208ENST00000568515 TCP10LQ8TDR4 215 aa22.68■■□□□ 1.22
DENND4A-208ENST00000568515 FAM151AQ8WW52 585 aa22.68■■□□□ 1.22
DENND4A-208ENST00000568515 HOMER2Q9NSB8 354 aa22.68■■□□□ 1.22
DENND4A-208ENST00000568515 ZNF219Q9P2Y4 722 aaPredicted RBP22.68■■□□□ 1.22
DENND4A-208ENST00000568515 hCG_1818297A0A087WSY0 165 aa22.68■■□□□ 1.22
DENND4A-208ENST00000568515 CCDC22O60826 627 aa22.68■■□□□ 1.22
DENND4A-208ENST00000568515 GLRA2P23416 452 aa22.68■■□□□ 1.22
DENND4A-208ENST00000568515 SSTR1P30872 391 aa22.68■■□□□ 1.22
DENND4A-208ENST00000568515 PHBP35232 272 aa22.68■■□□□ 1.22
DENND4A-208ENST00000568515 ZNF252P-AS1Q0IIN9 211 aa22.68■■□□□ 1.22
DENND4A-208ENST00000568515 ADGRD1Q6QNK2 874 aa22.68■■□□□ 1.22
DENND4A-208ENST00000568515 PYROXD1Q8WU10 500 aa22.68■■□□□ 1.22
DENND4A-208ENST00000568515 PTPRJQ12913 1337 aa22.68■■□□□ 1.22
DENND4A-208ENST00000568515 F8VP50 259 aa22.67■■□□□ 1.22
DENND4A-208ENST00000568515 MMP8P22894 467 aa22.67■■□□□ 1.22
DENND4A-208ENST00000568515 TFDP3Q5H9I0 405 aa22.67■■□□□ 1.22
DENND4A-208ENST00000568515 BTBD10Q9BSF8 475 aa22.67■■□□□ 1.22
DENND4A-208ENST00000568515 STOML1Q9UBI4 398 aa22.67■■□□□ 1.22
DENND4A-208ENST00000568515 FARP1Q9Y4F1 1045 aaPredicted RBP22.67■■□□□ 1.22
DENND4A-208ENST00000568515 RXRBP28702 533 aa22.67■■□□□ 1.22
DENND4A-208ENST00000568515 GAD2Q05329 585 aa22.67■■□□□ 1.22
DENND4A-208ENST00000568515 MUM1Q2TAK8 710 aa22.67■■□□□ 1.22
DENND4A-208ENST00000568515 TXNRD3NBQ6F5E7 133 aa22.67■■□□□ 1.22
DENND4A-208ENST00000568515 APBB1IPQ7Z5R6 666 aaPredicted RBP22.67■■□□□ 1.22
DENND4A-208ENST00000568515 PCGF5Q86SE9 256 aa22.67■■□□□ 1.22
DENND4A-208ENST00000568515 ACSF2Q96CM8 615 aaPredicted RBP22.67■■□□□ 1.22
DENND4A-208ENST00000568515 DHRS4Q9BTZ2 278 aa22.67■■□□□ 1.22
DENND4A-208ENST00000568515 VPS11Q9H270 941 aa22.67■■□□□ 1.22
DENND4A-208ENST00000568515 MANSC1Q9H8J5 431 aa22.67■■□□□ 1.22
DENND4A-208ENST00000568515 ARL8BQ9NVJ2 186 aa22.67■■□□□ 1.22
DENND4A-208ENST00000568515 HEY2Q9UBP5 337 aa22.67■■□□□ 1.22
DENND4A-208ENST00000568515 TM9SF1O15321 606 aa22.66■■□□□ 1.22
DENND4A-208ENST00000568515 PTPN7P35236 360 aa22.66■■□□□ 1.22
DENND4A-208ENST00000568515 ACOT2P49753 483 aa22.66■■□□□ 1.22
DENND4A-208ENST00000568515 LIG4P49917 911 aa22.66■■□□□ 1.22
DENND4A-208ENST00000568515 NLRP11P59045 1033 aaKnown RBP22.66■■□□□ 1.22
DENND4A-208ENST00000568515 ATP11CQ8NB49 1132 aa22.66■■□□□ 1.22
DENND4A-208ENST00000568515 CFAP61Q8NHU2 1237 aa22.66■■□□□ 1.22
DENND4A-208ENST00000568515 PAFAH2Q99487 392 aa22.66■■□□□ 1.22
DENND4A-208ENST00000568515 TUBB6Q9BUF5 446 aa22.66■■□□□ 1.22
DENND4A-208ENST00000568515 C12orf65Q9H3J6 166 aaKnown RBP22.66■■□□□ 1.22
DENND4A-208ENST00000568515 CNTN6Q9UQ52 1028 aa22.66■■□□□ 1.22
DENND4A-208ENST00000568515 LRRD1A4D1F6 860 aa22.66■■□□□ 1.22
DENND4A-208ENST00000568515 EME2A4GXA9 379 aaPredicted RBP22.66■■□□□ 1.22
DENND4A-208ENST00000568515 ZNF862O60290 1169 aa22.66■■□□□ 1.22
DENND4A-208ENST00000568515 PIAS1O75925 651 aa22.66■■□□□ 1.22
DENND4A-208ENST00000568515 HAUS5O94927 633 aa22.66■■□□□ 1.22
DENND4A-208ENST00000568515 KLC1Q07866 573 aa22.66■■□□□ 1.22
DENND4A-208ENST00000568515 DSTYKQ6XUX3 929 aa22.66■■□□□ 1.22
DENND4A-208ENST00000568515 C3orf62Q6ZUJ4 267 aa22.66■■□□□ 1.22
DENND4A-208ENST00000568515 BANPQ8N9N5 519 aa22.66■■□□□ 1.22
DENND4A-208ENST00000568515 MZB1Q8WU39 189 aa22.66■■□□□ 1.22
DENND4A-208ENST00000568515 PTCD3Q96EY7 689 aaKnown RBP22.66■■□□□ 1.22
DENND4A-208ENST00000568515 ZNF333Q96JL9 665 aa22.66■■□□□ 1.22
DENND4A-208ENST00000568515 TRIM55Q9BYV6 548 aa22.66■■□□□ 1.22
DENND4A-208ENST00000568515 SLC17A7Q9P2U7 560 aa22.66■■□□□ 1.22
DENND4A-208ENST00000568515 GABBR1Q9UBS5 961 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms