RNA–Protein interactions for RNA: ENST00000567947.1

CBFB-208, Transcript of core-binding factor subunit beta, human

TSL 3

Gene CBFB, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBFB-208	ENST00000567947	GAS2L3	Q86XJ1	694 aa		5.64	□□□□□ -1.51
CBFB-208	ENST00000567947	ARHGEF19	Q8IW93	802 aa		5.64	□□□□□ -1.51
CBFB-208	ENST00000567947	SECISBP2L	Q93073	1101 aa	Known RBP	5.64	□□□□□ -1.51
CBFB-208	ENST00000567947	FAM193B	Q96PV7	902 aa	Predicted RBP	5.64	□□□□□ -1.51
CBFB-208	ENST00000567947	TEX13A	Q9BXU3	409 aa	Predicted RBP	5.64	□□□□□ -1.51
CBFB-208	ENST00000567947	BCO1	Q9HAY6	547 aa		5.64	□□□□□ -1.51
CBFB-208	ENST00000567947	CGN	Q9P2M7	1197 aa	Known RBP	5.64	□□□□□ -1.51
CBFB-208	ENST00000567947	CCNL1	Q9UK58	526 aa	Predicted RBP	5.64	□□□□□ -1.51
CBFB-208	ENST00000567947	MORC2	Q9Y6X9	1032 aa	Predicted RBP	5.64	□□□□□ -1.51
CBFB-208	ENST00000567947	ARFGEF2	Q9Y6D5	1785 aa		5.64	□□□□□ -1.51
CBFB-208	ENST00000567947	HEG1	Q9ULI3	1381 aa		5.64	□□□□□ -1.51
CBFB-208	ENST00000567947	B3GALT2	O43825	422 aa		5.63	□□□□□ -1.51
CBFB-208	ENST00000567947	MBD3	O95983	291 aa		5.63	□□□□□ -1.51
CBFB-208	ENST00000567947	MTHFD2	P13995	350 aa		5.63	□□□□□ -1.51
CBFB-208	ENST00000567947	MCC	P23508	829 aa		5.63	□□□□□ -1.51
CBFB-208	ENST00000567947	NANOS3	P60323	173 aa	Known RBP	5.63	□□□□□ -1.51
CBFB-208	ENST00000567947	NHLH2	Q02577	135 aa		5.63	□□□□□ -1.51
CBFB-208	ENST00000567947	ADRM1	Q16186	407 aa		5.63	□□□□□ -1.51
CBFB-208	ENST00000567947	FAM47A	Q5JRC9	791 aa		5.63	□□□□□ -1.51
CBFB-208	ENST00000567947	C1orf141	Q5JVX7	400 aa		5.63	□□□□□ -1.51
CBFB-208	ENST00000567947	FAM102A	Q5T9C2	384 aa	Predicted RBP	5.63	□□□□□ -1.51
CBFB-208	ENST00000567947	SULT6B1	Q6IMI4	303 aa		5.63	□□□□□ -1.51
CBFB-208	ENST00000567947	ZNF771	Q7L3S4	317 aa	Predicted RBP	5.63	□□□□□ -1.51
CBFB-208	ENST00000567947	ZNF572	Q7Z3I7	529 aa	Predicted RBP	5.63	□□□□□ -1.51
CBFB-208	ENST00000567947	GPR156	Q8NFN8	814 aa		5.63	□□□□□ -1.51
CBFB-208	ENST00000567947	OR7D4	Q8NG98	312 aa		5.63	□□□□□ -1.51
CBFB-208	ENST00000567947	MDM1	Q8TC05	714 aa		5.63	□□□□□ -1.51
CBFB-208	ENST00000567947	AUTS2	Q8WXX7	1259 aa		5.63	□□□□□ -1.51
CBFB-208	ENST00000567947	HOXB13	Q92826	284 aa	Predicted RBP	5.63	□□□□□ -1.51
CBFB-208	ENST00000567947	TNPO1	Q92973	898 aa	Known RBP	5.63	□□□□□ -1.51
CBFB-208	ENST00000567947	LTV1	Q96GA3	475 aa	Predicted RBP	5.63	□□□□□ -1.51
CBFB-208	ENST00000567947	C22orf23	Q9BZE7	217 aa		5.63	□□□□□ -1.51
CBFB-208	ENST00000567947	AKIP1	Q9NQ31	210 aa		5.63	□□□□□ -1.51
CBFB-208	ENST00000567947	TRPM5	Q9NZQ8	1165 aa		5.63	□□□□□ -1.51
CBFB-208	ENST00000567947	PACSIN3	Q9UKS6	424 aa		5.63	□□□□□ -1.51
CBFB-208	ENST00000567947	ATRNL1	Q5VV63	1379 aa		5.63	□□□□□ -1.51
CBFB-208	ENST00000567947	RIC1	Q4ADV7	1423 aa		5.63	□□□□□ -1.51
CBFB-208	ENST00000567947	ADCY6	O43306	1168 aa		5.62	□□□□□ -1.51
CBFB-208	ENST00000567947	KIF1C	O43896	1103 aa	Known RBP	5.62	□□□□□ -1.51
CBFB-208	ENST00000567947	HMGB1	P09429	215 aa	Known RBP	5.62	□□□□□ -1.51
CBFB-208	ENST00000567947	STAT4	Q14765	748 aa		5.62	□□□□□ -1.51
CBFB-208	ENST00000567947	MUM1L1	Q5H9M0	696 aa		5.62	□□□□□ -1.51
CBFB-208	ENST00000567947	EFCAB12	Q6NXP0	572 aa		5.62	□□□□□ -1.51
CBFB-208	ENST00000567947	ZNF530	Q6P9A1	599 aa	Predicted RBP	5.62	□□□□□ -1.51
CBFB-208	ENST00000567947		Q6ZVL8	140 aa		5.62	□□□□□ -1.51
CBFB-208	ENST00000567947	KRT26	Q7Z3Y9	468 aa		5.62	□□□□□ -1.51
CBFB-208	ENST00000567947	VRK3	Q8IV63	474 aa		5.62	□□□□□ -1.51
CBFB-208	ENST00000567947	UBR7	Q8N806	425 aa		5.62	□□□□□ -1.51
CBFB-208	ENST00000567947	MNS1	Q8NEH6	495 aa		5.62	□□□□□ -1.51
CBFB-208	ENST00000567947	ZFP28	Q8NHY6	868 aa		5.62	□□□□□ -1.51
CBFB-208	ENST00000567947	RIN2	Q8WYP3	895 aa	Predicted RBP	5.62	□□□□□ -1.51
CBFB-208	ENST00000567947	TFAP2C	Q92754	450 aa		5.62	□□□□□ -1.51
CBFB-208	ENST00000567947	FATE1	Q969F0	183 aa		5.62	□□□□□ -1.51
CBFB-208	ENST00000567947	SYAP1	Q96A49	352 aa	Predicted RBP	5.62	□□□□□ -1.51
CBFB-208	ENST00000567947	RWDD1	Q9H446	243 aa	Predicted RBP	5.62	□□□□□ -1.51
CBFB-208	ENST00000567947	TOR3A	Q9H497	397 aa		5.62	□□□□□ -1.51
CBFB-208	ENST00000567947	EDAR	Q9UNE0	448 aa		5.62	□□□□□ -1.51
CBFB-208	ENST00000567947	C10orf71	Q711Q0	1435 aa		5.62	□□□□□ -1.51
CBFB-208	ENST00000567947	AFDN	P55196	1824 aa	Known RBP	5.62	□□□□□ -1.51
CBFB-208	ENST00000567947	RNMT	O43148	476 aa	Known RBP	5.61	□□□□□ -1.51
CBFB-208	ENST00000567947	NCR1	O76036	304 aa		5.61	□□□□□ -1.51
CBFB-208	ENST00000567947	ALOX15	P16050	662 aa	Predicted RBP	5.61	□□□□□ -1.51
CBFB-208	ENST00000567947	CALR	P27797	417 aa	Known RBP	5.61	□□□□□ -1.51
CBFB-208	ENST00000567947	RNASE9	P60153	205 aa	Known RBP	5.61	□□□□□ -1.51
CBFB-208	ENST00000567947	SOS1	Q07889	1333 aa	Predicted RBP	5.61	□□□□□ -1.51
CBFB-208	ENST00000567947	SLFN5	Q08AF3	891 aa		5.61	□□□□□ -1.51
CBFB-208	ENST00000567947	SP140	Q13342	867 aa		5.61	□□□□□ -1.51
CBFB-208	ENST00000567947	CC2D1B	Q5T0F9	858 aa	Known RBP	5.61	□□□□□ -1.51
CBFB-208	ENST00000567947		Q6YL49	198 aa		5.61	□□□□□ -1.51
CBFB-208	ENST00000567947	ZNF575	Q86XF7	245 aa		5.61	□□□□□ -1.51
CBFB-208	ENST00000567947	PLEKHF1	Q96S99	279 aa		5.61	□□□□□ -1.51
CBFB-208	ENST00000567947	CHMP4A	Q9BY43	222 aa		5.61	□□□□□ -1.51
CBFB-208	ENST00000567947	TMX1	Q9H3N1	280 aa		5.61	□□□□□ -1.51
CBFB-208	ENST00000567947	GREM2	Q9H772	168 aa		5.61	□□□□□ -1.51
CBFB-208	ENST00000567947	IFT122	Q9HBG6	1241 aa		5.61	□□□□□ -1.51
CBFB-208	ENST00000567947	RBM28	Q9NW13	759 aa	Known RBP	5.61	□□□□□ -1.51
CBFB-208	ENST00000567947	FAM30A	Q9NZY2	134 aa		5.61	□□□□□ -1.51
CBFB-208	ENST00000567947	USP25	Q9UHP3	1055 aa		5.61	□□□□□ -1.51
CBFB-208	ENST00000567947	DDX49	Q9Y6V7	483 aa	Known RBP	5.61	□□□□□ -1.51
CBFB-208	ENST00000567947	CXorf49	A8MYA2	514 aa	Predicted RBP	5.6	□□□□□ -1.51
CBFB-208	ENST00000567947		K7ESF4	209 aa		5.6	□□□□□ -1.51
CBFB-208	ENST00000567947	LPXN	O60711	386 aa		5.6	□□□□□ -1.51
CBFB-208	ENST00000567947	REC8	O95072	547 aa		5.6	□□□□□ -1.51
CBFB-208	ENST00000567947	LMNA	P02545	664 aa	Known RBP	5.6	□□□□□ -1.51
CBFB-208	ENST00000567947	SNRPA1	P09661	255 aa	Known RBP	5.6	□□□□□ -1.51
CBFB-208	ENST00000567947	CT47B1	P0C2W7	299 aa	Predicted RBP	5.6	□□□□□ -1.51
CBFB-208	ENST00000567947	SPATA31D3	P0C874	917 aa		5.6	□□□□□ -1.51
CBFB-208	ENST00000567947	TGM1	P22735	817 aa		5.6	□□□□□ -1.51
CBFB-208	ENST00000567947	KCNJ4	P48050	445 aa		5.6	□□□□□ -1.51
CBFB-208	ENST00000567947	CLRN1	P58418	232 aa		5.6	□□□□□ -1.51
CBFB-208	ENST00000567947	CBX1	P83916	185 aa		5.6	□□□□□ -1.51
CBFB-208	ENST00000567947	CDK17	Q00537	523 aa		5.6	□□□□□ -1.51
CBFB-208	ENST00000567947	MTHFSD	Q2M296	383 aa	Known RBP	5.6	□□□□□ -1.51
CBFB-208	ENST00000567947	PDCD4	Q53EL6	469 aa	Known RBP	5.6	□□□□□ -1.51
CBFB-208	ENST00000567947	AGAP9	Q5VTM2	703 aa		5.6	□□□□□ -1.51
CBFB-208	ENST00000567947	SPATA31D4	Q6ZUB0	917 aa		5.6	□□□□□ -1.51
CBFB-208	ENST00000567947	CMIP	Q8IY22	773 aa		5.6	□□□□□ -1.51
CBFB-208	ENST00000567947	KRT222	Q8N1A0	295 aa		5.6	□□□□□ -1.51
CBFB-208	ENST00000567947	ZG16B	Q96DA0	208 aa		5.6	□□□□□ -1.51
CBFB-208	ENST00000567947	MYCBP	Q99417	103 aa	Predicted RBP	5.6	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms