RNA–Protein interactions for RNA: ENST00000566583.5

SNHG20-204, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 1,338 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-204ENST00000566583 CNGA4Q8IV77 575 aa16.52■□□□□ 0.24
SNHG20-204ENST00000566583 OR8K1Q8NGG5 319 aa16.52■□□□□ 0.24
SNHG20-204ENST00000566583 OR6B3Q8NGW1 331 aa16.52■□□□□ 0.24
SNHG20-204ENST00000566583 OR10T2Q8NGX3 314 aa16.52■□□□□ 0.24
SNHG20-204ENST00000566583 ZSWIM1Q9BR11 485 aa16.52■□□□□ 0.24
SNHG20-204ENST00000566583 SYT11Q9BT88 431 aa16.52■□□□□ 0.24
SNHG20-204ENST00000566583 NUCKS1Q9H1E3 243 aaKnown RBP16.52■□□□□ 0.24
SNHG20-204ENST00000566583 ABHD10Q9NUJ1 306 aa16.52■□□□□ 0.24
SNHG20-204ENST00000566583 DDX43Q9NXZ2 648 aaKnown RBP16.52■□□□□ 0.24
SNHG20-204ENST00000566583 H3BNC9 293 aa16.51■□□□□ 0.23
SNHG20-204ENST00000566583 FSCN2O14926 492 aa16.51■□□□□ 0.23
SNHG20-204ENST00000566583 CYP26A1O43174 497 aa16.51■□□□□ 0.23
SNHG20-204ENST00000566583 GFPT2O94808 682 aa16.51■□□□□ 0.23
SNHG20-204ENST00000566583 CLSTN1O94985 981 aa16.51■□□□□ 0.23
SNHG20-204ENST00000566583 PAEPP09466 180 aa16.51■□□□□ 0.23
SNHG20-204ENST00000566583 CTSAP10619 480 aa16.51■□□□□ 0.23
SNHG20-204ENST00000566583 YWHAHQ04917 246 aaPredicted RBP16.51■□□□□ 0.23
SNHG20-204ENST00000566583 MEA1Q16626 185 aa16.51■□□□□ 0.23
SNHG20-204ENST00000566583 RSPO2Q6UXX9 243 aaPredicted RBP16.51■□□□□ 0.23
SNHG20-204ENST00000566583 METTL23Q86XA0 190 aa16.51■□□□□ 0.23
SNHG20-204ENST00000566583 DRC7Q8IY82 874 aa16.51■□□□□ 0.23
SNHG20-204ENST00000566583 VPS52Q8N1B4 723 aa16.51■□□□□ 0.23
SNHG20-204ENST00000566583 ZNF397Q8NF99 534 aaPredicted RBP16.51■□□□□ 0.23
SNHG20-204ENST00000566583 DDX1Q92499 740 aaKnown RBP16.51■□□□□ 0.23
SNHG20-204ENST00000566583 TMEM176AQ96HP8 235 aa16.51■□□□□ 0.23
SNHG20-204ENST00000566583 ACBD6Q9BR61 282 aa16.51■□□□□ 0.23
SNHG20-204ENST00000566583 NT5C1AQ9BXI3 368 aa16.51■□□□□ 0.23
SNHG20-204ENST00000566583 SNX25Q9H3E2 840 aa16.51■□□□□ 0.23
SNHG20-204ENST00000566583 DPEP3Q9H4B8 488 aa16.51■□□□□ 0.23
SNHG20-204ENST00000566583 ACP6Q9NPH0 428 aa16.51■□□□□ 0.23
SNHG20-204ENST00000566583 MTRRQ9UBK8 725 aa16.51■□□□□ 0.23
SNHG20-204ENST00000566583 BACE2Q9Y5Z0 518 aa16.51■□□□□ 0.23
SNHG20-204ENST00000566583 A8MXQ7 604 aa16.5■□□□□ 0.23
SNHG20-204ENST00000566583 CALCAP01258 141 aa16.5■□□□□ 0.23
SNHG20-204ENST00000566583 PDGFRBP09619 1106 aa16.5■□□□□ 0.23
SNHG20-204ENST00000566583 FERP16591 822 aa16.5■□□□□ 0.23
SNHG20-204ENST00000566583 GLUD2P49448 558 aa16.5■□□□□ 0.23
SNHG20-204ENST00000566583 KRT17Q04695 432 aa16.5■□□□□ 0.23
SNHG20-204ENST00000566583 PRPF38BQ5VTL8 546 aaKnown RBP16.5■□□□□ 0.23
SNHG20-204ENST00000566583 SFMBT2Q5VUG0 894 aa16.5■□□□□ 0.23
SNHG20-204ENST00000566583 FAM171BQ6P995 826 aa16.5■□□□□ 0.23
SNHG20-204ENST00000566583 PRSS55Q6UWB4 352 aaPredicted RBP16.5■□□□□ 0.23
SNHG20-204ENST00000566583 ANKS3Q6ZW76 656 aa16.5■□□□□ 0.23
SNHG20-204ENST00000566583 EPS8L1Q8TE68 723 aa16.5■□□□□ 0.23
SNHG20-204ENST00000566583 TFAP2BQ92481 460 aa16.5■□□□□ 0.23
SNHG20-204ENST00000566583 PANX2Q96RD6 677 aa16.5■□□□□ 0.23
SNHG20-204ENST00000566583 TMEM209Q96SK2 561 aa16.5■□□□□ 0.23
SNHG20-204ENST00000566583 SYT15Q9BQS2 421 aa16.5■□□□□ 0.23
SNHG20-204ENST00000566583 C11orf84Q9BUA3 381 aaPredicted RBP16.5■□□□□ 0.23
SNHG20-204ENST00000566583 ZCWPW1Q9H0M4 648 aa16.5■□□□□ 0.23
SNHG20-204ENST00000566583 RXFP1Q9HBX9 757 aa16.5■□□□□ 0.23
SNHG20-204ENST00000566583 ALG13Q9NP73 1137 aaKnown RBP16.5■□□□□ 0.23
SNHG20-204ENST00000566583 CRTAC1Q9NQ79 661 aa16.5■□□□□ 0.23
SNHG20-204ENST00000566583 NOCTQ9UK39 431 aaKnown RBP16.5■□□□□ 0.23
SNHG20-204ENST00000566583 CDH9Q9ULB4 789 aa16.5■□□□□ 0.23
SNHG20-204ENST00000566583 IRAK3Q9Y616 596 aa16.5■□□□□ 0.23
SNHG20-204ENST00000566583 ZNF638Q14966 1978 aaKnown RBP16.5■□□□□ 0.23
SNHG20-204ENST00000566583 CHD7Q9P2D1 2997 aa16.5■□□□□ 0.23
SNHG20-204ENST00000566583 EPOPA6NHQ4 379 aa16.49■□□□□ 0.23
SNHG20-204ENST00000566583 GRM6O15303 877 aa16.49■□□□□ 0.23
SNHG20-204ENST00000566583 ATP2C2O75185 946 aa16.49■□□□□ 0.23
SNHG20-204ENST00000566583 TPM1P09493 284 aa16.49■□□□□ 0.23
SNHG20-204ENST00000566583 KRT5P13647 590 aa16.49■□□□□ 0.23
SNHG20-204ENST00000566583 ACAT1P24752 427 aaKnown RBP16.49■□□□□ 0.23
SNHG20-204ENST00000566583 PCSK1P29120 753 aa16.49■□□□□ 0.23
SNHG20-204ENST00000566583 ERVFC1P60507 584 aa16.49■□□□□ 0.23
SNHG20-204ENST00000566583 CDK17Q00537 523 aa16.49■□□□□ 0.23
SNHG20-204ENST00000566583 ORC1Q13415 861 aa16.49■□□□□ 0.23
SNHG20-204ENST00000566583 PTPN14Q15678 1187 aa16.49■□□□□ 0.23
SNHG20-204ENST00000566583 CCDC142Q17RM4 750 aa16.49■□□□□ 0.23
SNHG20-204ENST00000566583 ZNF394Q53GI3 561 aa16.49■□□□□ 0.23
SNHG20-204ENST00000566583 INTS6LQ5JSJ4 861 aaKnown RBP16.49■□□□□ 0.23
SNHG20-204ENST00000566583 PPP2R2DQ66LE6 453 aa16.49■□□□□ 0.23
SNHG20-204ENST00000566583 SLC8B1Q6J4K2 584 aa16.49■□□□□ 0.23
SNHG20-204ENST00000566583 ZNF280DQ6N043 979 aa16.49■□□□□ 0.23
SNHG20-204ENST00000566583 CCDC186Q7Z3E2 898 aa16.49■□□□□ 0.23
SNHG20-204ENST00000566583 ACOT1Q86TX2 421 aa16.49■□□□□ 0.23
SNHG20-204ENST00000566583 LRRTM3Q86VH5 581 aa16.49■□□□□ 0.23
SNHG20-204ENST00000566583 SLC47A2Q86VL8 602 aa16.49■□□□□ 0.23
SNHG20-204ENST00000566583 CEP57Q86XR8 500 aa16.49■□□□□ 0.23
SNHG20-204ENST00000566583 TMEM139Q8IV31 216 aa16.49■□□□□ 0.23
SNHG20-204ENST00000566583 FBXO22Q8NEZ5 403 aa16.49■□□□□ 0.23
SNHG20-204ENST00000566583 POF1BQ8WVV4 589 aa16.49■□□□□ 0.23
SNHG20-204ENST00000566583 RIN2Q8WYP3 895 aaPredicted RBP16.49■□□□□ 0.23
SNHG20-204ENST00000566583 ANP32BQ92688 251 aaKnown RBP16.49■□□□□ 0.23
SNHG20-204ENST00000566583 TIFAQ96CG3 184 aa16.49■□□□□ 0.23
SNHG20-204ENST00000566583 LPIN3Q9BQK8 851 aa16.49■□□□□ 0.23
SNHG20-204ENST00000566583 CLSTN3Q9BQT9 956 aa16.49■□□□□ 0.23
SNHG20-204ENST00000566583 OXCT2Q9BYC2 517 aaPredicted RBP16.49■□□□□ 0.23
SNHG20-204ENST00000566583 SLC28A3Q9HAS3 691 aa16.49■□□□□ 0.23
SNHG20-204ENST00000566583 LAMA2P24043 3122 aaKnown RBP16.49■□□□□ 0.23
SNHG20-204ENST00000566583 OR6C75A6NL08 312 aa16.48■□□□□ 0.23
SNHG20-204ENST00000566583 H7C4K7 107 aa16.48■□□□□ 0.23
SNHG20-204ENST00000566583 ADAM12O43184 909 aa16.48■□□□□ 0.23
SNHG20-204ENST00000566583 VDRP11473 427 aa16.48■□□□□ 0.23
SNHG20-204ENST00000566583 CYP11B1P15538 503 aa16.48■□□□□ 0.23
SNHG20-204ENST00000566583 CHRNB2P17787 502 aa16.48■□□□□ 0.23
SNHG20-204ENST00000566583 PTPN1P18031 435 aaKnown RBP16.48■□□□□ 0.23
SNHG20-204ENST00000566583 USP8P40818 1118 aa16.48■□□□□ 0.23
SNHG20-204ENST00000566583 GSDMDP57764 484 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms