RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 SIDT1Q9NXL6 827 aaKnown RBP3.16□□□□□ -1.9
SMG1-212ENST00000566328 CALCOCO1Q9P1Z2 691 aa3.16□□□□□ -1.9
SMG1-212ENST00000566328 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.16□□□□□ -1.9
SMG1-212ENST00000566328 SLC45A2Q9UMX9 530 aa3.16□□□□□ -1.9
SMG1-212ENST00000566328 PCDHA13Q9Y5I0 950 aa3.16□□□□□ -1.9
SMG1-212ENST00000566328 IGKV2D-30A0A075B6S6 120 aa3.15□□□□□ -1.91
SMG1-212ENST00000566328 SMIM35A0A1B0GVV1 85 aa3.15□□□□□ -1.91
SMG1-212ENST00000566328 SOCS2O14508 198 aa3.15□□□□□ -1.91
SMG1-212ENST00000566328 GNAI3P08754 354 aa3.15□□□□□ -1.91
SMG1-212ENST00000566328 CCKARP32238 428 aa3.15□□□□□ -1.91
SMG1-212ENST00000566328 CYP2C19P33261 490 aa3.15□□□□□ -1.91
SMG1-212ENST00000566328 EEFSECP57772 596 aaKnown RBP3.15□□□□□ -1.91
SMG1-212ENST00000566328 ZNF280AP59817 542 aaPredicted RBP3.15□□□□□ -1.91
SMG1-212ENST00000566328 GNAI1P63096 354 aa3.15□□□□□ -1.91
SMG1-212ENST00000566328 MIDNQ504T8 468 aa3.15□□□□□ -1.91
SMG1-212ENST00000566328 RBM20Q5T481 1227 aaKnown RBP3.15□□□□□ -1.91
SMG1-212ENST00000566328 SLC30A10Q6XR72 485 aa3.15□□□□□ -1.91
SMG1-212ENST00000566328 PIGOQ8TEQ8 1089 aa3.15□□□□□ -1.91
SMG1-212ENST00000566328 FBXO41Q8TF61 875 aa3.15□□□□□ -1.91
SMG1-212ENST00000566328 CHAC2Q8WUX2 184 aa3.15□□□□□ -1.91
SMG1-212ENST00000566328 NSMCE1Q8WV22 266 aa3.15□□□□□ -1.91
SMG1-212ENST00000566328 ASB2Q96Q27 587 aa3.15□□□□□ -1.91
SMG1-212ENST00000566328 SPRTNQ9H040 489 aaPredicted RBP3.15□□□□□ -1.91
SMG1-212ENST00000566328 RLIMQ9NVW2 624 aa3.15□□□□□ -1.91
SMG1-212ENST00000566328 CFAP97Q9P2B7 532 aa3.15□□□□□ -1.91
SMG1-212ENST00000566328 DKK3Q9UBP4 350 aa3.15□□□□□ -1.91
SMG1-212ENST00000566328 E9PLN8 166 aa3.14□□□□□ -1.91
SMG1-212ENST00000566328 ZNF213O14771 459 aa3.14□□□□□ -1.91
SMG1-212ENST00000566328 ADAMTS3O15072 1205 aa3.14□□□□□ -1.91
SMG1-212ENST00000566328 TLR5O60602 858 aa3.14□□□□□ -1.91
SMG1-212ENST00000566328 JUPP14923 745 aa3.14□□□□□ -1.91
SMG1-212ENST00000566328 LPOP22079 712 aaPredicted RBP3.14□□□□□ -1.91
SMG1-212ENST00000566328 CYP2C18P33260 490 aa3.14□□□□□ -1.91
SMG1-212ENST00000566328 HOXA4Q00056 320 aaPredicted RBP3.14□□□□□ -1.91
SMG1-212ENST00000566328 DAZAP2Q15038 168 aaPredicted RBP3.14□□□□□ -1.91
SMG1-212ENST00000566328 TWIST1Q15672 202 aa3.14□□□□□ -1.91
SMG1-212ENST00000566328 CLUL1Q15846 466 aa3.14□□□□□ -1.91
SMG1-212ENST00000566328 PCID2Q5JVF3 399 aa3.14□□□□□ -1.91
SMG1-212ENST00000566328 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
SMG1-212ENST00000566328 SFRP4Q6FHJ7 346 aaPredicted RBP3.14□□□□□ -1.91
SMG1-212ENST00000566328 MIS18BP1Q6P0N0 1132 aa3.14□□□□□ -1.91
SMG1-212ENST00000566328 DTX2Q86UW9 622 aa3.14□□□□□ -1.91
SMG1-212ENST00000566328 SPATS2Q86XZ4 545 aaKnown RBP3.14□□□□□ -1.91
SMG1-212ENST00000566328 NANOGP1Q8N7R0 232 aa3.14□□□□□ -1.91
SMG1-212ENST00000566328 PNLDC1Q8NA58 520 aaKnown RBP3.14□□□□□ -1.91
SMG1-212ENST00000566328 PSD4Q8NDX1 1056 aa3.14□□□□□ -1.91
SMG1-212ENST00000566328 KLHDC4Q8TBB5 520 aa3.14□□□□□ -1.91
SMG1-212ENST00000566328 RAB24Q969Q5 203 aa3.14□□□□□ -1.91
SMG1-212ENST00000566328 CLPTM1LQ96KA5 538 aa3.14□□□□□ -1.91
SMG1-212ENST00000566328 VKORC1Q9BQB6 163 aa3.14□□□□□ -1.91
SMG1-212ENST00000566328 VPS33BQ9H267 617 aa3.14□□□□□ -1.91
SMG1-212ENST00000566328 SH2B3Q9UQQ2 575 aa3.14□□□□□ -1.91
SMG1-212ENST00000566328 RAD54BQ9Y620 910 aa3.14□□□□□ -1.91
SMG1-212ENST00000566328 TRIM75PA6NK02 468 aa3.13□□□□□ -1.91
SMG1-212ENST00000566328 H0YIZ8 118 aa3.13□□□□□ -1.91
SMG1-212ENST00000566328 PRKD3O94806 890 aa3.13□□□□□ -1.91
SMG1-212ENST00000566328 FGBP02675 491 aa3.13□□□□□ -1.91
SMG1-212ENST00000566328 TMEM191BP0C7N4 346 aa3.13□□□□□ -1.91
SMG1-212ENST00000566328 NHLRC4P0CG21 123 aaPredicted RBP3.13□□□□□ -1.91
SMG1-212ENST00000566328 SCP2P22307 547 aa3.13□□□□□ -1.91
SMG1-212ENST00000566328 SFPQP23246 707 aaKnown RBP eCLIP3.13□□□□□ -1.91
SMG1-212ENST00000566328 PCSK6P29122 969 aa3.13□□□□□ -1.91
SMG1-212ENST00000566328 ARHGAP25P42331 645 aa3.13□□□□□ -1.91
SMG1-212ENST00000566328 ZNF134P52741 427 aa3.13□□□□□ -1.91
SMG1-212ENST00000566328 TLE1Q04724 770 aa3.13□□□□□ -1.91
SMG1-212ENST00000566328 HABP2Q14520 560 aaPredicted RBP3.13□□□□□ -1.91
SMG1-212ENST00000566328 CERKLQ49MI3 558 aaPredicted RBP3.13□□□□□ -1.91
SMG1-212ENST00000566328 CCDC93Q567U6 631 aa3.13□□□□□ -1.91
SMG1-212ENST00000566328 RNF219Q5W0B1 726 aaPredicted RBP3.13□□□□□ -1.91
SMG1-212ENST00000566328 TAF2Q6P1X5 1199 aa3.13□□□□□ -1.91
SMG1-212ENST00000566328 JAZF1Q86VZ6 243 aa3.13□□□□□ -1.91
SMG1-212ENST00000566328 CHSY1Q86X52 802 aa3.13□□□□□ -1.91
SMG1-212ENST00000566328 AFAP1L2Q8N4X5 818 aa3.13□□□□□ -1.91
SMG1-212ENST00000566328 C8orf58Q8NAV2 365 aa3.13□□□□□ -1.91
SMG1-212ENST00000566328 WDR66Q8TBY9 1149 aa3.13□□□□□ -1.91
SMG1-212ENST00000566328 ADAMTS15Q8TE58 950 aa3.13□□□□□ -1.91
SMG1-212ENST00000566328 MRGPRX4Q96LA9 322 aa3.13□□□□□ -1.91
SMG1-212ENST00000566328 C5orf34Q96MH7 638 aa3.13□□□□□ -1.91
SMG1-212ENST00000566328 SMOC2Q9H3U7 446 aa3.13□□□□□ -1.91
SMG1-212ENST00000566328 TRNAU1APQ9NX07 287 aaKnown RBP3.13□□□□□ -1.91
SMG1-212ENST00000566328 ETAA1Q9NY74 926 aa3.13□□□□□ -1.91
SMG1-212ENST00000566328 DLL3Q9NYJ7 618 aa3.13□□□□□ -1.91
SMG1-212ENST00000566328 AFG3L2Q9Y4W6 797 aa3.13□□□□□ -1.91
SMG1-212ENST00000566328 WDR17Q8IZU2 1322 aa3.13□□□□□ -1.91
SMG1-212ENST00000566328 ZNF785A8K8V0 405 aa3.12□□□□□ -1.91
SMG1-212ENST00000566328 PRR23D1E9PI22 279 aaPredicted RBP3.12□□□□□ -1.91
SMG1-212ENST00000566328 K7ESF4 209 aa3.12□□□□□ -1.91
SMG1-212ENST00000566328 SLC16A3O15427 465 aaKnown RBP3.12□□□□□ -1.91
SMG1-212ENST00000566328 GPR39O43194 453 aa3.12□□□□□ -1.91
SMG1-212ENST00000566328 GJB1P08034 283 aa3.12□□□□□ -1.91
SMG1-212ENST00000566328 PRR23D2P0DMB1 279 aaPredicted RBP3.12□□□□□ -1.91
SMG1-212ENST00000566328 SMARCA1P28370 1054 aa3.12□□□□□ -1.91
SMG1-212ENST00000566328 ERVK-21P61565 698 aa3.12□□□□□ -1.91
SMG1-212ENST00000566328 PSMC1P62191 440 aaKnown RBP3.12□□□□□ -1.91
SMG1-212ENST00000566328 KLF1Q13351 362 aaPredicted RBP3.12□□□□□ -1.91
SMG1-212ENST00000566328 ICE2Q659A1 982 aa3.12□□□□□ -1.91
SMG1-212ENST00000566328 KIAA1161Q6NSJ0 714 aa3.12□□□□□ -1.91
SMG1-212ENST00000566328 TRIM72Q6ZMU5 477 aa3.12□□□□□ -1.91
SMG1-212ENST00000566328 TTC7BQ86TV6 843 aa3.12□□□□□ -1.91
SMG1-212ENST00000566328 FAM109AQ8N4B1 249 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms