RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 SEPT5Q99719 369 aaPredicted RBP21.3■■□□□ 1
CMTM3-211ENST00000565922 CRISPLD1Q9H336 500 aa21.3■■□□□ 1
CMTM3-211ENST00000565922 SLC27A5Q9Y2P5 690 aa21.3■■□□□ 1
CMTM3-211ENST00000565922 NUMBLQ9Y6R0 609 aa21.3■■□□□ 1
CMTM3-211ENST00000565922 KMT2EQ8IZD2 1858 aa21.3■■□□□ 1
CMTM3-211ENST00000565922 PTPRDP23468 1912 aa21.29■■□□□ 1
CMTM3-211ENST00000565922 TRIOO75962 3097 aa21.29■■□□□ 1
CMTM3-211ENST00000565922 NUP210Q8TEM1 1887 aaPredicted RBP21.29■■□□□ 1
CMTM3-211ENST00000565922 GABRDO14764 452 aa21.29■■□□□ 1
CMTM3-211ENST00000565922 FAM163BP0C2L3 166 aa21.29■■□□□ 1
CMTM3-211ENST00000565922 SRFP11831 508 aa21.29■■□□□ 1
CMTM3-211ENST00000565922 ENPEPQ07075 957 aa21.29■■□□□ 1
CMTM3-211ENST00000565922 SLC5A9Q2M3M2 681 aa21.29■■□□□ 1
CMTM3-211ENST00000565922 SOWAHAQ2M3V2 549 aa21.29■■□□□ 1
CMTM3-211ENST00000565922 EDRF1Q3B7T1 1238 aa21.29■■□□□ 1
CMTM3-211ENST00000565922 COBLL1Q53SF7 1204 aa21.29■■□□□ 1
CMTM3-211ENST00000565922 INTS6LQ5JSJ4 861 aaKnown RBP21.29■■□□□ 1
CMTM3-211ENST00000565922 INTS8Q75QN2 995 aaKnown RBP21.29■■□□□ 1
CMTM3-211ENST00000565922 SLC44A3Q8N4M1 653 aa21.29■■□□□ 1
CMTM3-211ENST00000565922 FBXL6Q8N531 539 aa21.29■■□□□ 1
CMTM3-211ENST00000565922 FAM200AQ8TCP9 573 aa21.29■■□□□ 1
CMTM3-211ENST00000565922 ING5Q8WYH8 240 aa21.29■■□□□ 1
CMTM3-211ENST00000565922 PSMG2Q969U7 264 aa21.29■■□□□ 1
CMTM3-211ENST00000565922 MMS19Q96T76 1030 aa21.29■■□□□ 1
CMTM3-211ENST00000565922 GPR88Q9GZN0 384 aa21.29■■□□□ 1
CMTM3-211ENST00000565922 ABCB6Q9NP58 842 aa21.29■■□□□ 1
CMTM3-211ENST00000565922 ABI2Q9NYB9 513 aaPredicted RBP21.29■■□□□ 1
CMTM3-211ENST00000565922 LRRIQ3A6PVS8 624 aaPredicted RBP21.28■■□□□ 1
CMTM3-211ENST00000565922 IKBKBO14920 756 aa21.28■■□□□ 1
CMTM3-211ENST00000565922 CLSTN1O94985 981 aa21.28■■□□□ 1
CMTM3-211ENST00000565922 CST3P01034 146 aaPredicted RBP21.28■■□□□ 1
CMTM3-211ENST00000565922 MYL4P12829 197 aa21.28■■□□□ 1
CMTM3-211ENST00000565922 KRT13P13646 458 aa21.28■■□□□ 1
CMTM3-211ENST00000565922 CASP4P49662 377 aa21.28■■□□□ 1
CMTM3-211ENST00000565922 MAPRE1Q15691 268 aaKnown RBP21.28■■□□□ 1
CMTM3-211ENST00000565922 LIMS2Q7Z4I7 341 aa21.28■■□□□ 1
CMTM3-211ENST00000565922 SPATA20Q8TB22 786 aa21.28■■□□□ 1
CMTM3-211ENST00000565922 RSAD2Q8WXG1 361 aa21.28■■□□□ 1
CMTM3-211ENST00000565922 ZNF516Q92618 1163 aa21.28■■□□□ 1
CMTM3-211ENST00000565922 GZF1Q9H116 711 aaPredicted RBP21.28■■□□□ 1
CMTM3-211ENST00000565922 FBXL21Q9UKT6 434 aa21.28■■□□□ 1
CMTM3-211ENST00000565922 PCDHA5Q9Y5H7 936 aa21.28■■□□□ 1
CMTM3-211ENST00000565922 OBSL1O75147 1896 aa21.27■■□□□ 1
CMTM3-211ENST00000565922 TACC1O75410 805 aa21.27■■□□□ 1
CMTM3-211ENST00000565922 HAPLN1P10915 354 aaPredicted RBP21.27■■□□□ 1
CMTM3-211ENST00000565922 CEBPBP17676 345 aa21.27■■□□□ 1
CMTM3-211ENST00000565922 WARSP23381 471 aaKnown RBP21.27■■□□□ 1
CMTM3-211ENST00000565922 PSMC2P35998 433 aaKnown RBP21.27■■□□□ 1
CMTM3-211ENST00000565922 PPP1R2P41236 205 aa21.27■■□□□ 1
CMTM3-211ENST00000565922 ADAM9Q13443 819 aa21.27■■□□□ 1
CMTM3-211ENST00000565922 STIM1Q13586 685 aa21.27■■□□□ 1
CMTM3-211ENST00000565922 TAF12Q16514 161 aa21.27■■□□□ 1
CMTM3-211ENST00000565922 WDR72Q3MJ13 1102 aa21.27■■□□□ 1
CMTM3-211ENST00000565922 SCARA3Q6AZY7 606 aa21.27■■□□□ 1
CMTM3-211ENST00000565922 LRRTM3Q86VH5 581 aa21.27■■□□□ 1
CMTM3-211ENST00000565922 FGF14Q92915 247 aa21.27■■□□□ 1
CMTM3-211ENST00000565922 MCRS1Q96EZ8 462 aa21.27■■□□□ 1
CMTM3-211ENST00000565922 FUBP3Q96I24 572 aaKnown RBP eCLIP21.27■■□□□ 1
CMTM3-211ENST00000565922 TSG101Q99816 390 aa21.27■■□□□ 1
CMTM3-211ENST00000565922 DNAJC25Q9H1X3 360 aa21.27■■□□□ 1
CMTM3-211ENST00000565922 SMOC2Q9H3U7 446 aa21.27■■□□□ 1
CMTM3-211ENST00000565922 VRTNQ9H8Y1 702 aa21.27■■□□□ 1
CMTM3-211ENST00000565922 CDH9Q9ULB4 789 aa21.27■■□□□ 1
CMTM3-211ENST00000565922 ARIH1Q9Y4X5 557 aaPredicted RBP21.27■■□□□ 1
CMTM3-211ENST00000565922 ZNF318Q5VUA4 2279 aa21.27■■□□□ 1
CMTM3-211ENST00000565922 ZNF638Q14966 1978 aaKnown RBP21.27■□□□□ 0.99
CMTM3-211ENST00000565922 C4BPAP04003 597 aaKnown RBP21.26■□□□□ 0.99
CMTM3-211ENST00000565922 ACAT1P24752 427 aaKnown RBP21.26■□□□□ 0.99
CMTM3-211ENST00000565922 VAMP7P51809 220 aa21.26■□□□□ 0.99
CMTM3-211ENST00000565922 NCOA4Q13772 614 aa21.26■□□□□ 0.99
CMTM3-211ENST00000565922 ZNF699Q32M78 642 aa21.26■□□□□ 0.99
CMTM3-211ENST00000565922 ZCWPW2Q504Y3 356 aa21.26■□□□□ 0.99
CMTM3-211ENST00000565922 TDRD10Q5VZ19 366 aaKnown RBP21.26■□□□□ 0.99
CMTM3-211ENST00000565922 PARM1Q6UWI2 310 aa21.26■□□□□ 0.99
CMTM3-211ENST00000565922 C4orf50Q6ZRC1 276 aa21.26■□□□□ 0.99
CMTM3-211ENST00000565922 DNAJB7Q7Z6W7 309 aaPredicted RBP21.26■□□□□ 0.99
CMTM3-211ENST00000565922 OSTM1Q86WC4 334 aa21.26■□□□□ 0.99
CMTM3-211ENST00000565922 SPATA2LQ8IUW3 424 aaPredicted RBP21.26■□□□□ 0.99
CMTM3-211ENST00000565922 FAM186BQ8IYM0 893 aa21.26■□□□□ 0.99
CMTM3-211ENST00000565922 SMYD4Q8IYR2 804 aaPredicted RBP21.26■□□□□ 0.99
CMTM3-211ENST00000565922 HS6ST3Q8IZP7 471 aa21.26■□□□□ 0.99
CMTM3-211ENST00000565922 TTC9BQ8N6N2 239 aa21.26■□□□□ 0.99
CMTM3-211ENST00000565922 PLEKHO2Q8TD55 490 aa21.26■□□□□ 0.99
CMTM3-211ENST00000565922 GCNAQ96QF7 691 aa21.26■□□□□ 0.99
CMTM3-211ENST00000565922 SYT15Q9BQS2 421 aa21.26■□□□□ 0.99
CMTM3-211ENST00000565922 MKNK1Q9BUB5 465 aa21.26■□□□□ 0.99
CMTM3-211ENST00000565922 KCNH6Q9H252 994 aa21.26■□□□□ 0.99
CMTM3-211ENST00000565922 SNX25Q9H3E2 840 aa21.26■□□□□ 0.99
CMTM3-211ENST00000565922 MFSD1Q9H3U5 465 aa21.26■□□□□ 0.99
CMTM3-211ENST00000565922 WNT16Q9UBV4 365 aa21.26■□□□□ 0.99
CMTM3-211ENST00000565922 CETN3O15182 167 aa21.25■□□□□ 0.99
CMTM3-211ENST00000565922 ECI2O75521 394 aa21.25■□□□□ 0.99
CMTM3-211ENST00000565922 P4HA1P13674 534 aa21.25■□□□□ 0.99
CMTM3-211ENST00000565922 CCR2P41597 374 aa21.25■□□□□ 0.99
CMTM3-211ENST00000565922 PRCPP42785 496 aa21.25■□□□□ 0.99
CMTM3-211ENST00000565922 MYL6P60660 151 aa21.25■□□□□ 0.99
CMTM3-211ENST00000565922 RPL10AP62906 217 aaKnown RBP21.25■□□□□ 0.99
CMTM3-211ENST00000565922 ZACNQ401N2 412 aa21.25■□□□□ 0.99
CMTM3-211ENST00000565922 CFAP221Q4G0U5 840 aa21.25■□□□□ 0.99
CMTM3-211ENST00000565922 ZNF667Q5HYK9 610 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms