RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 CXorf38Q8TB03 319 aa13.19□□□□□ -0.3
SPG7-211ENST00000565370 TMEM174Q8WUU8 243 aa13.19□□□□□ -0.3
SPG7-211ENST00000565370 PSMG2Q969U7 264 aa13.19□□□□□ -0.3
SPG7-211ENST00000565370 SYAP1Q96A49 352 aaPredicted RBP13.19□□□□□ -0.3
SPG7-211ENST00000565370 BORCS6Q96GS4 357 aa13.19□□□□□ -0.3
SPG7-211ENST00000565370 FAM84AQ96KN4 292 aa13.19□□□□□ -0.3
SPG7-211ENST00000565370 MMS19Q96T76 1030 aa13.19□□□□□ -0.3
SPG7-211ENST00000565370 RTP3Q9BQQ7 232 aa13.19□□□□□ -0.3
SPG7-211ENST00000565370 ACBD6Q9BR61 282 aa13.19□□□□□ -0.3
SPG7-211ENST00000565370 GTPBP4Q9BZE4 634 aaKnown RBP13.19□□□□□ -0.3
SPG7-211ENST00000565370 KCTD10Q9H3F6 313 aa13.19□□□□□ -0.3
SPG7-211ENST00000565370 CEP72Q9P209 647 aa13.19□□□□□ -0.3
SPG7-211ENST00000565370 DOCK6Q96HP0 2047 aa13.18□□□□□ -0.3
SPG7-211ENST00000565370 NARSO43776 548 aaKnown RBP13.18□□□□□ -0.3
SPG7-211ENST00000565370 KINO60870 393 aaKnown RBP13.18□□□□□ -0.3
SPG7-211ENST00000565370 VNN2O95498 520 aa13.18□□□□□ -0.3
SPG7-211ENST00000565370 CFHP08603 1231 aa13.18□□□□□ -0.3
SPG7-211ENST00000565370 NR2F2P24468 414 aa13.18□□□□□ -0.3
SPG7-211ENST00000565370 RPL13P26373 211 aaKnown RBP13.18□□□□□ -0.3
SPG7-211ENST00000565370 ATICP31939 592 aa13.18□□□□□ -0.3
SPG7-211ENST00000565370 PFKPQ01813 784 aa13.18□□□□□ -0.3
SPG7-211ENST00000565370 MAPRE1Q15691 268 aaKnown RBP13.18□□□□□ -0.3
SPG7-211ENST00000565370 ARHGAP15Q53QZ3 475 aa13.18□□□□□ -0.3
SPG7-211ENST00000565370 PARM1Q6UWI2 310 aa13.18□□□□□ -0.3
SPG7-211ENST00000565370 C4orf50Q6ZRC1 276 aa13.18□□□□□ -0.3
SPG7-211ENST00000565370 FMR1NBQ8N0W7 255 aaPredicted RBP13.18□□□□□ -0.3
SPG7-211ENST00000565370 SIX5Q8N196 739 aa13.18□□□□□ -0.3
SPG7-211ENST00000565370 TTC9BQ8N6N2 239 aa13.18□□□□□ -0.3
SPG7-211ENST00000565370 FLCNQ8NFG4 579 aa13.18□□□□□ -0.3
SPG7-211ENST00000565370 FGF14Q92915 247 aa13.18□□□□□ -0.3
SPG7-211ENST00000565370 MCRS1Q96EZ8 462 aa13.18□□□□□ -0.3
SPG7-211ENST00000565370 PHOX2BQ99453 314 aa13.18□□□□□ -0.3
SPG7-211ENST00000565370 KXD1Q9BQD3 176 aa13.18□□□□□ -0.3
SPG7-211ENST00000565370 GPR88Q9GZN0 384 aa13.18□□□□□ -0.3
SPG7-211ENST00000565370 CRISPLD1Q9H336 500 aa13.18□□□□□ -0.3
SPG7-211ENST00000565370 ABCB6Q9NP58 842 aa13.18□□□□□ -0.3
SPG7-211ENST00000565370 SLC2A4RGQ9NR83 387 aa13.18□□□□□ -0.3
SPG7-211ENST00000565370 WNT16Q9UBV4 365 aa13.18□□□□□ -0.3
SPG7-211ENST00000565370 TRAF3IP3Q9Y228 551 aa13.18□□□□□ -0.3
SPG7-211ENST00000565370 SLC27A5Q9Y2P5 690 aa13.18□□□□□ -0.3
SPG7-211ENST00000565370 NOTCH4Q99466 2003 aa13.18□□□□□ -0.3
SPG7-211ENST00000565370 LRRIQ3A6PVS8 624 aaPredicted RBP13.17□□□□□ -0.3
SPG7-211ENST00000565370 MAPK13O15264 365 aa13.17□□□□□ -0.3
SPG7-211ENST00000565370 ECI2O75521 394 aa13.17□□□□□ -0.3
SPG7-211ENST00000565370 STAU1O95793 577 aaKnown RBP13.17□□□□□ -0.3
SPG7-211ENST00000565370 KRT13P13646 458 aa13.17□□□□□ -0.3
SPG7-211ENST00000565370 P4HA1P13674 534 aa13.17□□□□□ -0.3
SPG7-211ENST00000565370 ACAT1P24752 427 aaKnown RBP13.17□□□□□ -0.3
SPG7-211ENST00000565370 CDC25CP30307 473 aa13.17□□□□□ -0.3
SPG7-211ENST00000565370 NUBP1P53384 320 aa13.17□□□□□ -0.3
SPG7-211ENST00000565370 RPL10AP62906 217 aaKnown RBP13.17□□□□□ -0.3
SPG7-211ENST00000565370 SNW1Q13573 536 aaKnown RBP13.17□□□□□ -0.3
SPG7-211ENST00000565370 NFIL3Q16649 462 aa13.17□□□□□ -0.3
SPG7-211ENST00000565370 SOWAHAQ2M3V2 549 aa13.17□□□□□ -0.3
SPG7-211ENST00000565370 ZNF699Q32M78 642 aa13.17□□□□□ -0.3
SPG7-211ENST00000565370 INTS8Q75QN2 995 aaKnown RBP13.17□□□□□ -0.3
SPG7-211ENST00000565370 TMC8Q8IU68 726 aa13.17□□□□□ -0.3
SPG7-211ENST00000565370 SPATA2LQ8IUW3 424 aaPredicted RBP13.17□□□□□ -0.3
SPG7-211ENST00000565370 HS6ST3Q8IZP7 471 aa13.17□□□□□ -0.3
SPG7-211ENST00000565370 GPR152Q8TDT2 470 aa13.17□□□□□ -0.3
SPG7-211ENST00000565370 ELSPBP1Q96BH3 223 aa13.17□□□□□ -0.3
SPG7-211ENST00000565370 TCEAL4Q96EI5 215 aa13.17□□□□□ -0.3
SPG7-211ENST00000565370 FUBP3Q96I24 572 aaKnown RBP eCLIP13.17□□□□□ -0.3
SPG7-211ENST00000565370 GSDMAQ96QA5 445 aa13.17□□□□□ -0.3
SPG7-211ENST00000565370 SYT15Q9BQS2 421 aa13.17□□□□□ -0.3
SPG7-211ENST00000565370 IMPG2Q9BZV3 1241 aa13.17□□□□□ -0.3
SPG7-211ENST00000565370 DNAJC25Q9H1X3 360 aa13.17□□□□□ -0.3
SPG7-211ENST00000565370 SNX25Q9H3E2 840 aa13.17□□□□□ -0.3
SPG7-211ENST00000565370 ZFP14Q9HCL3 533 aa13.17□□□□□ -0.3
SPG7-211ENST00000565370 ARHGEF3Q9NR81 526 aa13.17□□□□□ -0.3
SPG7-211ENST00000565370 DMAC2Q9NW81 257 aa13.17□□□□□ -0.3
SPG7-211ENST00000565370 CDH9Q9ULB4 789 aa13.17□□□□□ -0.3
SPG7-211ENST00000565370 TRIOO75962 3097 aa13.17□□□□□ -0.3
SPG7-211ENST00000565370 NUP210Q8TEM1 1887 aaPredicted RBP13.16□□□□□ -0.3
SPG7-211ENST00000565370 A0A1W2PRU2 124 aa13.16□□□□□ -0.3
SPG7-211ENST00000565370 GABRDO14764 452 aa13.16□□□□□ -0.3
SPG7-211ENST00000565370 SOAT2O75908 522 aa13.16□□□□□ -0.3
SPG7-211ENST00000565370 PDGFBP01127 241 aaPredicted RBP13.16□□□□□ -0.3
SPG7-211ENST00000565370 CSH1P0DML2 217 aa13.16□□□□□ -0.3
SPG7-211ENST00000565370 CSH2P0DML3 217 aa13.16□□□□□ -0.3
SPG7-211ENST00000565370 HAPLN1P10915 354 aaPredicted RBP13.16□□□□□ -0.3
SPG7-211ENST00000565370 ATF6P18850 670 aa13.16□□□□□ -0.3
SPG7-211ENST00000565370 TRIM21P19474 475 aaKnown RBP13.16□□□□□ -0.3
SPG7-211ENST00000565370 WARSP23381 471 aaKnown RBP13.16□□□□□ -0.3
SPG7-211ENST00000565370 GABRR2P28476 465 aa13.16□□□□□ -0.3
SPG7-211ENST00000565370 CCR2P41597 374 aa13.16□□□□□ -0.3
SPG7-211ENST00000565370 PNOCQ13519 176 aa13.16□□□□□ -0.3
SPG7-211ENST00000565370 STIM1Q13586 685 aa13.16□□□□□ -0.3
SPG7-211ENST00000565370 NCOA4Q13772 614 aa13.16□□□□□ -0.3
SPG7-211ENST00000565370 TEAD2Q15562 447 aa13.16□□□□□ -0.3
SPG7-211ENST00000565370 WDR72Q3MJ13 1102 aa13.16□□□□□ -0.3
SPG7-211ENST00000565370 ASTLQ6HA08 431 aaPredicted RBP13.16□□□□□ -0.3
SPG7-211ENST00000565370 SHKBP1Q8TBC3 707 aa13.16□□□□□ -0.3
SPG7-211ENST00000565370 TMC2Q8TDI7 906 aa13.16□□□□□ -0.3
SPG7-211ENST00000565370 PARD3BQ8TEW8 1205 aa13.16□□□□□ -0.3
SPG7-211ENST00000565370 DEPDC1BQ8WUY9 529 aa13.16□□□□□ -0.3
SPG7-211ENST00000565370 SMARCD2Q92925 531 aa13.16□□□□□ -0.3
SPG7-211ENST00000565370 SMARCE1Q969G3 411 aa13.16□□□□□ -0.3
SPG7-211ENST00000565370 E2F7Q96AV8 911 aa13.16□□□□□ -0.3
SPG7-211ENST00000565370 SHDQ96IW2 340 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms