RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 PRSS36Q5K4E3 855 aa19.69■□□□□ 0.74
SYNGR3-204ENST00000564642 PARM1Q6UWI2 310 aa19.69■□□□□ 0.74
SYNGR3-204ENST00000564642 GUF1Q8N442 669 aaKnown RBP19.69■□□□□ 0.74
SYNGR3-204ENST00000564642 TTC9BQ8N6N2 239 aa19.69■□□□□ 0.74
SYNGR3-204ENST00000564642 FAM200AQ8TCP9 573 aa19.69■□□□□ 0.74
SYNGR3-204ENST00000564642 PARD3BQ8TEW8 1205 aa19.69■□□□□ 0.74
SYNGR3-204ENST00000564642 ZNF516Q92618 1163 aa19.69■□□□□ 0.74
SYNGR3-204ENST00000564642 FGF14Q92915 247 aa19.69■□□□□ 0.74
SYNGR3-204ENST00000564642 TCEAL4Q96EI5 215 aa19.69■□□□□ 0.74
SYNGR3-204ENST00000564642 TIGD1Q96MW7 591 aa19.69■□□□□ 0.74
SYNGR3-204ENST00000564642 MFSD1Q9H3U5 465 aa19.69■□□□□ 0.74
SYNGR3-204ENST00000564642 ABI2Q9NYB9 513 aaPredicted RBP19.69■□□□□ 0.74
SYNGR3-204ENST00000564642 PCDHB5Q9Y5E4 795 aa19.69■□□□□ 0.74
SYNGR3-204ENST00000564642 NARSO43776 548 aaKnown RBP19.68■□□□□ 0.74
SYNGR3-204ENST00000564642 SOAT2O75908 522 aa19.68■□□□□ 0.74
SYNGR3-204ENST00000564642 SMC2O95347 1197 aa19.68■□□□□ 0.74
SYNGR3-204ENST00000564642 SRFP11831 508 aa19.68■□□□□ 0.74
SYNGR3-204ENST00000564642 CEBPBP17676 345 aa19.68■□□□□ 0.74
SYNGR3-204ENST00000564642 ACAT1P24752 427 aaKnown RBP19.68■□□□□ 0.74
SYNGR3-204ENST00000564642 RPL13P26373 211 aaKnown RBP19.68■□□□□ 0.74
SYNGR3-204ENST00000564642 PCSK1P29120 753 aa19.68■□□□□ 0.74
SYNGR3-204ENST00000564642 BIRC3Q13489 604 aa19.68■□□□□ 0.74
SYNGR3-204ENST00000564642 VEPH1Q14D04 833 aa19.68■□□□□ 0.74
SYNGR3-204ENST00000564642 NFE2Q16621 373 aaPredicted RBP19.68■□□□□ 0.74
SYNGR3-204ENST00000564642 ITIH5Q86UX2 942 aa19.68■□□□□ 0.74
SYNGR3-204ENST00000564642 GSDMAQ96QA5 445 aa19.68■□□□□ 0.74
SYNGR3-204ENST00000564642 DNAJC25Q9H1X3 360 aa19.68■□□□□ 0.74
SYNGR3-204ENST00000564642 GABRDO14764 452 aa19.67■□□□□ 0.74
SYNGR3-204ENST00000564642 CLSTN1O94985 981 aa19.67■□□□□ 0.74
SYNGR3-204ENST00000564642 CFHP08603 1231 aa19.67■□□□□ 0.74
SYNGR3-204ENST00000564642 HAPLN1P10915 354 aaPredicted RBP19.67■□□□□ 0.74
SYNGR3-204ENST00000564642 ANP32AP39687 249 aaKnown RBP19.67■□□□□ 0.74
SYNGR3-204ENST00000564642 CCR2P41597 374 aa19.67■□□□□ 0.74
SYNGR3-204ENST00000564642 EPHA5P54756 1037 aa19.67■□□□□ 0.74
SYNGR3-204ENST00000564642 TNNC1P63316 161 aa19.67■□□□□ 0.74
SYNGR3-204ENST00000564642 TAF12Q16514 161 aa19.67■□□□□ 0.74
SYNGR3-204ENST00000564642 NFIL3Q16649 462 aa19.67■□□□□ 0.74
SYNGR3-204ENST00000564642 INTS6LQ5JSJ4 861 aaKnown RBP19.67■□□□□ 0.74
SYNGR3-204ENST00000564642 DNAJB7Q7Z6W7 309 aaPredicted RBP19.67■□□□□ 0.74
SYNGR3-204ENST00000564642 OSTM1Q86WC4 334 aa19.67■□□□□ 0.74
SYNGR3-204ENST00000564642 SMARCE1Q969G3 411 aa19.67■□□□□ 0.74
SYNGR3-204ENST00000564642 PSMG2Q969U7 264 aa19.67■□□□□ 0.74
SYNGR3-204ENST00000564642 SYAP1Q96A49 352 aaPredicted RBP19.67■□□□□ 0.74
SYNGR3-204ENST00000564642 RPP25Q9BUL9 199 aaKnown RBP19.67■□□□□ 0.74
SYNGR3-204ENST00000564642 GZF1Q9H116 711 aaPredicted RBP19.67■□□□□ 0.74
SYNGR3-204ENST00000564642 LRRIQ3A6PVS8 624 aaPredicted RBP19.66■□□□□ 0.74
SYNGR3-204ENST00000564642 FGF19O95750 216 aa19.66■□□□□ 0.74
SYNGR3-204ENST00000564642 PDGFBP01127 241 aaPredicted RBP19.66■□□□□ 0.74
SYNGR3-204ENST00000564642 NR2F2P24468 414 aa19.66■□□□□ 0.74
SYNGR3-204ENST00000564642 ATICP31939 592 aa19.66■□□□□ 0.74
SYNGR3-204ENST00000564642 MYL6P60660 151 aa19.66■□□□□ 0.74
SYNGR3-204ENST00000564642 CLDN10P78369 228 aa19.66■□□□□ 0.74
SYNGR3-204ENST00000564642 WDR72Q3MJ13 1102 aa19.66■□□□□ 0.74
SYNGR3-204ENST00000564642 PLEKHO2Q8TD55 490 aa19.66■□□□□ 0.74
SYNGR3-204ENST00000564642 TMC2Q8TDI7 906 aa19.66■□□□□ 0.74
SYNGR3-204ENST00000564642 PI4K2AQ9BTU6 479 aa19.66■□□□□ 0.74
SYNGR3-204ENST00000564642 TMLHEQ9NVH6 421 aa19.66■□□□□ 0.74
SYNGR3-204ENST00000564642 CHMP5Q9NZZ3 219 aa19.66■□□□□ 0.74
SYNGR3-204ENST00000564642 WNT16Q9UBV4 365 aa19.66■□□□□ 0.74
SYNGR3-204ENST00000564642 GTF3C4Q9UKN8 822 aa19.66■□□□□ 0.74
SYNGR3-204ENST00000564642 PCDHA5Q9Y5H7 936 aa19.66■□□□□ 0.74
SYNGR3-204ENST00000564642 GJA1P17302 382 aa19.65■□□□□ 0.74
SYNGR3-204ENST00000564642 WARSP23381 471 aaKnown RBP19.65■□□□□ 0.74
SYNGR3-204ENST00000564642 ADAM9Q13443 819 aa19.65■□□□□ 0.74
SYNGR3-204ENST00000564642 ZNF658Q5TYW1 1059 aaPredicted RBP19.65■□□□□ 0.74
SYNGR3-204ENST00000564642 LIMS2Q7Z4I7 341 aa19.65■□□□□ 0.74
SYNGR3-204ENST00000564642 SMYD4Q8IYR2 804 aaPredicted RBP19.65■□□□□ 0.74
SYNGR3-204ENST00000564642 GIPC2Q8TF65 315 aa19.65■□□□□ 0.74
SYNGR3-204ENST00000564642 KXD1Q9BQD3 176 aa19.65■□□□□ 0.74
SYNGR3-204ENST00000564642 LPIN3Q9BQK8 851 aa19.65■□□□□ 0.74
SYNGR3-204ENST00000564642 LRRC3Q9BY71 257 aa19.65■□□□□ 0.74
SYNGR3-204ENST00000564642 GTPBP4Q9BZE4 634 aaKnown RBP19.65■□□□□ 0.74
SYNGR3-204ENST00000564642 GPR88Q9GZN0 384 aa19.65■□□□□ 0.74
SYNGR3-204ENST00000564642 SNX25Q9H3E2 840 aa19.65■□□□□ 0.74
SYNGR3-204ENST00000564642 SLITRK6Q9H5Y7 841 aa19.65■□□□□ 0.74
SYNGR3-204ENST00000564642 ZFP14Q9HCL3 533 aa19.65■□□□□ 0.74
SYNGR3-204ENST00000564642 NXF1Q9UBU9 619 aaKnown RBP19.65■□□□□ 0.74
SYNGR3-204ENST00000564642 CDH9Q9ULB4 789 aa19.65■□□□□ 0.74
SYNGR3-204ENST00000564642 A0A1W2PRU2 124 aa19.64■□□□□ 0.73
SYNGR3-204ENST00000564642 IKBKBO14920 756 aa19.64■□□□□ 0.73
SYNGR3-204ENST00000564642 MAPK13O15264 365 aa19.64■□□□□ 0.73
SYNGR3-204ENST00000564642 KINO60870 393 aaKnown RBP19.64■□□□□ 0.73
SYNGR3-204ENST00000564642 MOSPD3O75425 235 aa19.64■□□□□ 0.73
SYNGR3-204ENST00000564642 ECI2O75521 394 aa19.64■□□□□ 0.73
SYNGR3-204ENST00000564642 STAU1O95793 577 aaKnown RBP19.64■□□□□ 0.73
SYNGR3-204ENST00000564642 C4BPAP04003 597 aaKnown RBP19.64■□□□□ 0.73
SYNGR3-204ENST00000564642 PDGFRBP09619 1106 aa19.64■□□□□ 0.73
SYNGR3-204ENST00000564642 FAM163BP0C2L3 166 aa19.64■□□□□ 0.73
SYNGR3-204ENST00000564642 KRT13P13646 458 aa19.64■□□□□ 0.73
SYNGR3-204ENST00000564642 LMO2P25791 158 aa19.64■□□□□ 0.73
SYNGR3-204ENST00000564642 PSMC2P35998 433 aaKnown RBP19.64■□□□□ 0.73
SYNGR3-204ENST00000564642 GNL1P36915 607 aaPredicted RBP19.64■□□□□ 0.73
SYNGR3-204ENST00000564642 VAMP7P51809 220 aa19.64■□□□□ 0.73
SYNGR3-204ENST00000564642 GPC5P78333 572 aa19.64■□□□□ 0.73
SYNGR3-204ENST00000564642 DLG4P78352 724 aa19.64■□□□□ 0.73
SYNGR3-204ENST00000564642 TEAD2Q15562 447 aa19.64■□□□□ 0.73
SYNGR3-204ENST00000564642 TDRD10Q5VZ19 366 aaKnown RBP19.64■□□□□ 0.73
SYNGR3-204ENST00000564642 TMC8Q8IU68 726 aa19.64■□□□□ 0.73
SYNGR3-204ENST00000564642 SPATA2LQ8IUW3 424 aaPredicted RBP19.64■□□□□ 0.73
SYNGR3-204ENST00000564642 SIX5Q8N196 739 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms