RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 FAM200AQ8TCP9 573 aa22.61■■□□□ 1.21
CHD9-208ENST00000563410 SPPL2BQ8TCT7 592 aa22.61■■□□□ 1.21
CHD9-208ENST00000563410 C2orf15Q8WU43 125 aaKnown RBP22.61■■□□□ 1.21
CHD9-208ENST00000563410 SAAL1Q96ER3 474 aa22.61■■□□□ 1.21
CHD9-208ENST00000563410 MSANTD3Q96H12 275 aa22.61■■□□□ 1.21
CHD9-208ENST00000563410 ZFYVE19Q96K21 471 aa22.61■■□□□ 1.21
CHD9-208ENST00000563410 FAM213AQ9BRX8 229 aa22.61■■□□□ 1.21
CHD9-208ENST00000563410 FGFBP2Q9BYJ0 223 aa22.61■■□□□ 1.21
CHD9-208ENST00000563410 TASP1Q9H6P5 420 aa22.61■■□□□ 1.21
CHD9-208ENST00000563410 C8orf33Q9H7E9 229 aaPredicted RBP22.61■■□□□ 1.21
CHD9-208ENST00000563410 OLFML3Q9NRN5 406 aa22.61■■□□□ 1.21
CHD9-208ENST00000563410 NCDNQ9UBB6 729 aa22.61■■□□□ 1.21
CHD9-208ENST00000563410 EXOC7Q9UPT5 735 aa22.61■■□□□ 1.21
CHD9-208ENST00000563410 ATG2BQ96BY7 2078 aa22.61■■□□□ 1.21
CHD9-208ENST00000563410 FRMD3A2A2Y4 597 aa22.6■■□□□ 1.21
CHD9-208ENST00000563410 MYBPHLA2RUH7 354 aa22.6■■□□□ 1.21
CHD9-208ENST00000563410 DPYSL4O14531 572 aa22.6■■□□□ 1.21
CHD9-208ENST00000563410 GCNT3O95395 438 aa22.6■■□□□ 1.21
CHD9-208ENST00000563410 HAPLN1P10915 354 aaPredicted RBP22.6■■□□□ 1.21
CHD9-208ENST00000563410 TXLNAP40222 546 aa22.6■■□□□ 1.21
CHD9-208ENST00000563410 VEPH1Q14D04 833 aa22.6■■□□□ 1.21
CHD9-208ENST00000563410 ARHGAP29Q52LW3 1261 aa22.6■■□□□ 1.21
CHD9-208ENST00000563410 CXorf38Q8TB03 319 aa22.6■■□□□ 1.21
CHD9-208ENST00000563410 GIPC2Q8TF65 315 aa22.6■■□□□ 1.21
CHD9-208ENST00000563410 USP28Q96RU2 1077 aa22.6■■□□□ 1.21
CHD9-208ENST00000563410 TMLHEQ9NVH6 421 aa22.6■■□□□ 1.21
CHD9-208ENST00000563410 GTSE1Q9NYZ3 720 aa22.6■■□□□ 1.21
CHD9-208ENST00000563410 MORC2Q9Y6X9 1032 aaPredicted RBP22.6■■□□□ 1.21
CHD9-208ENST00000563410 ANAPC1Q9H1A4 1944 aa22.59■■□□□ 1.21
CHD9-208ENST00000563410 RALGAPA1Q6GYQ0 2036 aa22.59■■□□□ 1.21
CHD9-208ENST00000563410 SPECC1L-ADORA2AF8WAN1 911 aa22.59■■□□□ 1.21
CHD9-208ENST00000563410 CDC25CP30307 473 aa22.59■■□□□ 1.21
CHD9-208ENST00000563410 CCR3P51677 355 aa22.59■■□□□ 1.21
CHD9-208ENST00000563410 KPNA1P52294 538 aaPredicted RBP22.59■■□□□ 1.21
CHD9-208ENST00000563410 SATB1Q01826 763 aa22.59■■□□□ 1.21
CHD9-208ENST00000563410 C1orf228Q6PIY5 440 aa22.59■■□□□ 1.21
CHD9-208ENST00000563410 TMEM150AQ86TG1 271 aa22.59■■□□□ 1.21
CHD9-208ENST00000563410 C1orf127Q8N9H9 656 aa22.59■■□□□ 1.21
CHD9-208ENST00000563410 TTC8Q8TAM2 541 aa22.59■■□□□ 1.21
CHD9-208ENST00000563410 FAM84AQ96KN4 292 aa22.59■■□□□ 1.21
CHD9-208ENST00000563410 ZNF560Q96MR9 790 aa22.59■■□□□ 1.21
CHD9-208ENST00000563410 SLC46A2Q9BY10 475 aa22.59■■□□□ 1.21
CHD9-208ENST00000563410 PANK2Q9BZ23 570 aa22.59■■□□□ 1.21
CHD9-208ENST00000563410 RBM12Q9NTZ6 932 aaKnown RBP22.59■■□□□ 1.21
CHD9-208ENST00000563410 ABI2Q9NYB9 513 aaPredicted RBP22.59■■□□□ 1.21
CHD9-208ENST00000563410 DLL3Q9NYJ7 618 aa22.59■■□□□ 1.21
CHD9-208ENST00000563410 GREB1Q4ZG55 1949 aa22.59■■□□□ 1.21
CHD9-208ENST00000563410 ITGB3P05106 788 aa22.58■■□□□ 1.21
CHD9-208ENST00000563410 IDEP14735 1019 aa22.58■■□□□ 1.21
CHD9-208ENST00000563410 HMGA1P17096 107 aaKnown RBP22.58■■□□□ 1.21
CHD9-208ENST00000563410 GARTP22102 1010 aa22.58■■□□□ 1.21
CHD9-208ENST00000563410 POLR2BP30876 1174 aaKnown RBP22.58■■□□□ 1.21
CHD9-208ENST00000563410 CTHP32929 405 aa22.58■■□□□ 1.21
CHD9-208ENST00000563410 NRLP54845 237 aa22.58■■□□□ 1.21
CHD9-208ENST00000563410 TFAMQ00059 246 aaKnown RBP22.58■■□□□ 1.21
CHD9-208ENST00000563410 SLC39A14Q15043 492 aa22.58■■□□□ 1.21
CHD9-208ENST00000563410 CCDC73Q6ZRK6 1079 aa22.58■■□□□ 1.21
CHD9-208ENST00000563410 DCP1BQ8IZD4 617 aaKnown RBP22.58■■□□□ 1.21
CHD9-208ENST00000563410 BPIFB1Q8TDL5 484 aa22.58■■□□□ 1.21
CHD9-208ENST00000563410 SMG9Q9H0W8 520 aaKnown RBP22.58■■□□□ 1.21
CHD9-208ENST00000563410 L1RE1Q9UN81 338 aa22.58■■□□□ 1.21
CHD9-208ENST00000563410 AGAP1Q9UPQ3 857 aa22.58■■□□□ 1.21
CHD9-208ENST00000563410 MTMR6Q9Y217 621 aa22.58■■□□□ 1.21
CHD9-208ENST00000563410 PCDHB13Q9Y5F0 798 aa22.58■■□□□ 1.21
CHD9-208ENST00000563410 SPTBN2O15020 2390 aa22.57■■□□□ 1.2
CHD9-208ENST00000563410 NCOR2Q9Y618 2525 aa22.57■■□□□ 1.2
CHD9-208ENST00000563410 GOLGA8IPA6NC78 632 aa22.57■■□□□ 1.2
CHD9-208ENST00000563410 GOLGA8JA6NMD2 632 aa22.57■■□□□ 1.2
CHD9-208ENST00000563410 LDHAP00338 332 aaKnown RBP22.57■■□□□ 1.2
CHD9-208ENST00000563410 PNPLA4P41247 253 aa22.57■■□□□ 1.2
CHD9-208ENST00000563410 STAT6P42226 847 aa22.57■■□□□ 1.2
CHD9-208ENST00000563410 CXCL12P48061 93 aa22.57■■□□□ 1.2
CHD9-208ENST00000563410 TNK2Q07912 1038 aa22.57■■□□□ 1.2
CHD9-208ENST00000563410 PUM1Q14671 1186 aaKnown RBP eCLIP22.57■■□□□ 1.2
CHD9-208ENST00000563410 PPP2R5DQ14738 602 aa22.57■■□□□ 1.2
CHD9-208ENST00000563410 RALGPS2Q86X27 583 aaPredicted RBP22.57■■□□□ 1.2
CHD9-208ENST00000563410 PDCL2Q8N4E4 241 aa22.57■■□□□ 1.2
CHD9-208ENST00000563410 SPEM1Q8N4L4 309 aa22.57■■□□□ 1.2
CHD9-208ENST00000563410 GCNAQ96QF7 691 aa22.57■■□□□ 1.2
CHD9-208ENST00000563410 CBWD1Q9BRT8 395 aa22.57■■□□□ 1.2
CHD9-208ENST00000563410 RBAKQ9NYW8 714 aaPredicted RBP22.57■■□□□ 1.2
CHD9-208ENST00000563410 PCDHB5Q9Y5E4 795 aa22.57■■□□□ 1.2
CHD9-208ENST00000563410 F11P03951 625 aa22.56■■□□□ 1.2
CHD9-208ENST00000563410 TGM1P22735 817 aa22.56■■□□□ 1.2
CHD9-208ENST00000563410 GPR15P49685 360 aa22.56■■□□□ 1.2
CHD9-208ENST00000563410 LRRC32Q14392 662 aa22.56■■□□□ 1.2
CHD9-208ENST00000563410 TAF12Q16514 161 aa22.56■■□□□ 1.2
CHD9-208ENST00000563410 Q6ZS52 159 aa22.56■■□□□ 1.2
CHD9-208ENST00000563410 DGLUCYQ7Z3D6 616 aa22.56■■□□□ 1.2
CHD9-208ENST00000563410 CMTM8Q8IZV2 173 aa22.56■■□□□ 1.2
CHD9-208ENST00000563410 STKLD1Q8NE28 680 aa22.56■■□□□ 1.2
CHD9-208ENST00000563410 INTS4Q96HW7 963 aaKnown RBP22.56■■□□□ 1.2
CHD9-208ENST00000563410 PANK4Q9NVE7 773 aa22.56■■□□□ 1.2
CHD9-208ENST00000563410 PTPRDP23468 1912 aa22.55■■□□□ 1.2
CHD9-208ENST00000563410 PRPF6O94906 941 aaKnown RBP22.55■■□□□ 1.2
CHD9-208ENST00000563410 NLRP12P59046 1061 aa22.55■■□□□ 1.2
CHD9-208ENST00000563410 PLCB2Q00722 1185 aa22.55■■□□□ 1.2
CHD9-208ENST00000563410 TSPY1Q01534 308 aa22.55■■□□□ 1.2
CHD9-208ENST00000563410 DMWDQ09019 674 aa22.55■■□□□ 1.2
CHD9-208ENST00000563410 ALCAMQ13740 583 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms