RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 NXPH1P58417 271 aa5.65□□□□□ -1.5
CHD9-206ENST00000562791 TCF15Q12870 199 aa5.65□□□□□ -1.5
CHD9-206ENST00000562791 BOP1Q14137 746 aaKnown RBP5.65□□□□□ -1.5
CHD9-206ENST00000562791 BRDTQ58F21 947 aaPredicted RBP5.65□□□□□ -1.5
CHD9-206ENST00000562791 USP45Q70EL2 814 aa5.65□□□□□ -1.5
CHD9-206ENST00000562791 HEATR3Q7Z4Q2 680 aa5.65□□□□□ -1.5
CHD9-206ENST00000562791 PPP1R32Q7Z5V6 425 aa5.65□□□□□ -1.5
CHD9-206ENST00000562791 PPP1R3BQ86XI6 285 aa5.65□□□□□ -1.5
CHD9-206ENST00000562791 SRRM1Q8IYB3 904 aaKnown RBP5.65□□□□□ -1.5
CHD9-206ENST00000562791 TNPO1Q92973 898 aaKnown RBP5.65□□□□□ -1.5
CHD9-206ENST00000562791 RFKQ969G6 155 aa5.65□□□□□ -1.5
CHD9-206ENST00000562791 PBKQ96KB5 322 aa5.65□□□□□ -1.5
CHD9-206ENST00000562791 CNPPD1Q9BV87 410 aa5.65□□□□□ -1.5
CHD9-206ENST00000562791 PDCL3Q9H2J4 239 aa5.65□□□□□ -1.5
CHD9-206ENST00000562791 MRPL46Q9H2W6 279 aaKnown RBP5.65□□□□□ -1.5
CHD9-206ENST00000562791 KLC4Q9NSK0 619 aa5.65□□□□□ -1.5
CHD9-206ENST00000562791 GNL3LQ9NVN8 582 aaKnown RBP5.65□□□□□ -1.5
CHD9-206ENST00000562791 FEZ2Q9UHY8 353 aaPredicted RBP5.65□□□□□ -1.5
CHD9-206ENST00000562791 POLHQ9Y253 713 aa5.65□□□□□ -1.5
CHD9-206ENST00000562791 NOP58Q9Y2X3 529 aaKnown RBP5.65□□□□□ -1.5
CHD9-206ENST00000562791 NR2E3Q9Y5X4 410 aa5.65□□□□□ -1.5
CHD9-206ENST00000562791 SPATA31A3Q5VYP0 1347 aa5.65□□□□□ -1.51
CHD9-206ENST00000562791 M0QYG6 137 aa5.64□□□□□ -1.51
CHD9-206ENST00000562791 CHEK2O96017 543 aa5.64□□□□□ -1.51
CHD9-206ENST00000562791 GPD1P21695 349 aa5.64□□□□□ -1.51
CHD9-206ENST00000562791 RBM20Q5T481 1227 aaKnown RBP5.64□□□□□ -1.51
CHD9-206ENST00000562791 VPS53Q5VIR6 699 aa5.64□□□□□ -1.51
CHD9-206ENST00000562791 SMAP1Q8IYB5 467 aaPredicted RBP5.64□□□□□ -1.51
CHD9-206ENST00000562791 FAM109AQ8N4B1 249 aa5.64□□□□□ -1.51
CHD9-206ENST00000562791 CPA6Q8N4T0 437 aa5.64□□□□□ -1.51
CHD9-206ENST00000562791 ZNF830Q96NB3 372 aaPredicted RBP5.64□□□□□ -1.51
CHD9-206ENST00000562791 OSBPL9Q96SU4 736 aa5.64□□□□□ -1.51
CHD9-206ENST00000562791 ACTRT3Q9BYD9 372 aa5.64□□□□□ -1.51
CHD9-206ENST00000562791 GTPBP4Q9BZE4 634 aaKnown RBP5.64□□□□□ -1.51
CHD9-206ENST00000562791 TPSD1Q9BZJ3 242 aa5.64□□□□□ -1.51
CHD9-206ENST00000562791 AMBRA1Q9C0C7 1298 aa5.64□□□□□ -1.51
CHD9-206ENST00000562791 WDCPQ9H6R7 721 aa5.64□□□□□ -1.51
CHD9-206ENST00000562791 TMEM51Q9NW97 253 aa5.64□□□□□ -1.51
CHD9-206ENST00000562791 DKK3Q9UBP4 350 aa5.64□□□□□ -1.51
CHD9-206ENST00000562791 SPEF1Q9Y4P9 236 aa5.64□□□□□ -1.51
CHD9-206ENST00000562791 MANSC4A6NHS7 340 aaPredicted RBP5.63□□□□□ -1.51
CHD9-206ENST00000562791 INO80B-WBP1J3KQ70 363 aa5.63□□□□□ -1.51
CHD9-206ENST00000562791 DTNBO60941 627 aa5.63□□□□□ -1.51
CHD9-206ENST00000562791 URI1O94763 535 aaPredicted RBP5.63□□□□□ -1.51
CHD9-206ENST00000562791 SNUPNO95149 360 aaKnown RBP5.63□□□□□ -1.51
CHD9-206ENST00000562791 POU2F2P09086 479 aa5.63□□□□□ -1.51
CHD9-206ENST00000562791 TYRP14679 529 aa5.63□□□□□ -1.51
CHD9-206ENST00000562791 RASAL3Q86YV0 1011 aa5.63□□□□□ -1.51
CHD9-206ENST00000562791 CAMKK1Q8N5S9 505 aa5.63□□□□□ -1.51
CHD9-206ENST00000562791 DPF1Q92782 380 aa5.63□□□□□ -1.51
CHD9-206ENST00000562791 GPATCH3Q96I76 525 aa5.63□□□□□ -1.51
CHD9-206ENST00000562791 INO80BQ9C086 356 aaPredicted RBP5.63□□□□□ -1.51
CHD9-206ENST00000562791 SERHLQ9NQF3 203 aa5.63□□□□□ -1.51
CHD9-206ENST00000562791 HOMER2Q9NSB8 354 aa5.63□□□□□ -1.51
CHD9-206ENST00000562791 LMBRD1Q9NUN5 540 aa5.63□□□□□ -1.51
CHD9-206ENST00000562791 ZDHHC8Q9ULC8 765 aa5.63□□□□□ -1.51
CHD9-206ENST00000562791 LUC7L2Q9Y383 392 aaKnown RBP5.63□□□□□ -1.51
CHD9-206ENST00000562791 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.62□□□□□ -1.51
CHD9-206ENST00000562791 SLC16A6O15403 523 aa5.62□□□□□ -1.51
CHD9-206ENST00000562791 TRIAP1O43715 76 aa5.62□□□□□ -1.51
CHD9-206ENST00000562791 ARIH2O95376 493 aa5.62□□□□□ -1.51
CHD9-206ENST00000562791 PDHA1P08559 390 aa5.62□□□□□ -1.51
CHD9-206ENST00000562791 NR2F6P10588 404 aa5.62□□□□□ -1.51
CHD9-206ENST00000562791 EXOSC9Q06265 439 aaKnown RBP5.62□□□□□ -1.51
CHD9-206ENST00000562791 LRCH2Q5VUJ6 765 aa5.62□□□□□ -1.51
CHD9-206ENST00000562791 TAF3Q5VWG9 929 aa5.62□□□□□ -1.51
CHD9-206ENST00000562791 USP37Q86T82 979 aa5.62□□□□□ -1.51
CHD9-206ENST00000562791 FKBP10Q96AY3 582 aa5.62□□□□□ -1.51
CHD9-206ENST00000562791 HAPLN3Q96S86 360 aa5.62□□□□□ -1.51
CHD9-206ENST00000562791 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.62□□□□□ -1.51
CHD9-206ENST00000562791 PCDHA1Q9Y5I3 950 aa5.62□□□□□ -1.51
CHD9-206ENST00000562791 COL3A1P02461 1466 aaPredicted RBP5.62□□□□□ -1.51
CHD9-206ENST00000562791 TTC36A6NLP5 189 aa5.61□□□□□ -1.51
CHD9-206ENST00000562791 IL33O95760 270 aa5.61□□□□□ -1.51
CHD9-206ENST00000562791 EBLN1P0CF75 366 aa5.61□□□□□ -1.51
CHD9-206ENST00000562791 ITGALP20701 1170 aa5.61□□□□□ -1.51
CHD9-206ENST00000562791 DRD4P21917 467 aa5.61□□□□□ -1.51
CHD9-206ENST00000562791 CD6P30203 668 aa5.61□□□□□ -1.51
CHD9-206ENST00000562791 GCLCP48506 637 aaPredicted RBP5.61□□□□□ -1.51
CHD9-206ENST00000562791 ZNF134P52741 427 aa5.61□□□□□ -1.51
CHD9-206ENST00000562791 EXOSC10Q01780 885 aaKnown RBP5.61□□□□□ -1.51
CHD9-206ENST00000562791 AOX1Q06278 1338 aa5.61□□□□□ -1.51
CHD9-206ENST00000562791 SLC20A2Q08357 652 aa5.61□□□□□ -1.51
CHD9-206ENST00000562791 EIF2B5Q13144 721 aaKnown RBP5.61□□□□□ -1.51
CHD9-206ENST00000562791 OS9Q13438 667 aaPredicted RBP5.61□□□□□ -1.51
CHD9-206ENST00000562791 PGS1Q32NB8 556 aa5.61□□□□□ -1.51
CHD9-206ENST00000562791 THEMIS2Q5TEJ8 643 aa5.61□□□□□ -1.51
CHD9-206ENST00000562791 ZBTB46Q86UZ6 589 aa5.61□□□□□ -1.51
CHD9-206ENST00000562791 CELF5Q8N6W0 485 aaKnown RBP5.61□□□□□ -1.51
CHD9-206ENST00000562791 FAM46DQ8NEK8 389 aa5.61□□□□□ -1.51
CHD9-206ENST00000562791 KLHDC4Q8TBB5 520 aa5.61□□□□□ -1.51
CHD9-206ENST00000562791 DDB2Q92466 427 aa5.61□□□□□ -1.51
CHD9-206ENST00000562791 FAM136AQ96C01 138 aa5.61□□□□□ -1.51
CHD9-206ENST00000562791 CHMP4CQ96CF2 233 aa5.61□□□□□ -1.51
CHD9-206ENST00000562791 HSPBAP1Q96EW2 488 aa5.61□□□□□ -1.51
CHD9-206ENST00000562791 ALG8Q9BVK2 526 aa5.61□□□□□ -1.51
CHD9-206ENST00000562791 WNT6Q9Y6F9 365 aa5.61□□□□□ -1.51
CHD9-206ENST00000562791 TTLL1O95922 423 aa5.6□□□□□ -1.51
CHD9-206ENST00000562791 CDK4P11802 303 aa5.6□□□□□ -1.51
CHD9-206ENST00000562791 JUPP14923 745 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms