RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 WARSP23381 471 aaKnown RBP10.48□□□□□ -0.73
CLK3-208ENST00000562626 KLRC2P26717 231 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 TNNC1P63316 161 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 TFF2Q03403 129 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 RAB33AQ14088 237 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 CLUL1Q15846 466 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 SLC8B1Q6J4K2 584 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 PHLDB3Q6NSJ2 640 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 SYCE2Q6PIF2 218 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 TRIM65Q6PJ69 517 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 RNF19BQ6ZMZ0 732 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 ANKS3Q6ZW76 656 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 USP37Q86T82 979 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 FAM114A1Q8IWE2 563 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 GPR65Q8IYL9 337 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 EFHBQ8N7U6 833 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 EHBP1Q8NDI1 1231 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 APPL2Q8NEU8 664 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 KREMEN1Q96MU8 473 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 PGLYRP2Q96PD5 576 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 MMS19Q96T76 1030 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 APOL5Q9BWW9 433 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 RHOBTB2Q9BYZ6 727 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 NIF3L1Q9GZT8 377 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 INTS2Q9H0H0 1204 aaKnown RBP10.48□□□□□ -0.73
CLK3-208ENST00000562626 ZCWPW1Q9H0M4 648 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 NDST4Q9H3R1 872 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 TSPY26PQ9H489 355 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 MAN1C1Q9NR34 630 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.48□□□□□ -0.73
CLK3-208ENST00000562626 DDX43Q9NXZ2 648 aaKnown RBP10.48□□□□□ -0.73
CLK3-208ENST00000562626 CLDND1Q9NY35 253 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 GCNT4Q9P109 453 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 LIMA1Q9UHB6 759 aaKnown RBP10.48□□□□□ -0.73
CLK3-208ENST00000562626 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.47□□□□□ -0.73
CLK3-208ENST00000562626 MTMR11A4FU01 709 aa10.47□□□□□ -0.73
CLK3-208ENST00000562626 H3BQ06 376 aaPredicted RBP10.47□□□□□ -0.73
CLK3-208ENST00000562626 H7C4K7 107 aa10.47□□□□□ -0.73
CLK3-208ENST00000562626 EPHB6O15197 1021 aa10.47□□□□□ -0.73
CLK3-208ENST00000562626 TEX33O43247 280 aa10.47□□□□□ -0.73
CLK3-208ENST00000562626 TACC1O75410 805 aa10.47□□□□□ -0.73
CLK3-208ENST00000562626 RFPL2O75678 378 aa10.47□□□□□ -0.73
CLK3-208ENST00000562626 SOAT2O75908 522 aa10.47□□□□□ -0.73
CLK3-208ENST00000562626 CLSTN1O94985 981 aa10.47□□□□□ -0.73
CLK3-208ENST00000562626 ADH1AP07327 375 aa10.47□□□□□ -0.73
CLK3-208ENST00000562626 CD58P19256 250 aa10.47□□□□□ -0.73
CLK3-208ENST00000562626 ACO1P21399 889 aaKnown RBP10.47□□□□□ -0.73
CLK3-208ENST00000562626 PON1P27169 355 aa10.47□□□□□ -0.73
CLK3-208ENST00000562626 SLC39A12Q504Y0 691 aa10.47□□□□□ -0.73
CLK3-208ENST00000562626 INTS6LQ5JSJ4 861 aaKnown RBP10.47□□□□□ -0.73
CLK3-208ENST00000562626 RRAGAQ7L523 313 aa10.47□□□□□ -0.73
CLK3-208ENST00000562626 TMEM86AQ8N2M4 240 aa10.47□□□□□ -0.73
CLK3-208ENST00000562626 RNF214Q8ND24 703 aa10.47□□□□□ -0.73
CLK3-208ENST00000562626 STKLD1Q8NE28 680 aa10.47□□□□□ -0.73
CLK3-208ENST00000562626 FAM200AQ8TCP9 573 aa10.47□□□□□ -0.73
CLK3-208ENST00000562626 TAF4BQ92750 862 aa10.47□□□□□ -0.73
CLK3-208ENST00000562626 MSLNLQ96KJ4 702 aa10.47□□□□□ -0.73
CLK3-208ENST00000562626 NAP1L5Q96NT1 182 aaPredicted RBP10.47□□□□□ -0.73
CLK3-208ENST00000562626 EMILIN2Q9BXX0 1053 aa10.47□□□□□ -0.73
CLK3-208ENST00000562626 ELOVL4Q9GZR5 314 aa10.47□□□□□ -0.73
CLK3-208ENST00000562626 NAT10Q9H0A0 1025 aaKnown RBP10.47□□□□□ -0.73
CLK3-208ENST00000562626 TMEM30AQ9NV96 361 aa10.47□□□□□ -0.73
CLK3-208ENST00000562626 MAGEC2Q9UBF1 373 aaPredicted RBP10.47□□□□□ -0.73
CLK3-208ENST00000562626 STK39Q9UEW8 545 aa10.47□□□□□ -0.73
CLK3-208ENST00000562626 FBXW11Q9UKB1 542 aa10.47□□□□□ -0.73
CLK3-208ENST00000562626 GTF3C4Q9UKN8 822 aa10.47□□□□□ -0.73
CLK3-208ENST00000562626 OR6C75A6NL08 312 aa10.46□□□□□ -0.73
CLK3-208ENST00000562626 RNF225M0QZC1 329 aaPredicted RBP10.46□□□□□ -0.73
CLK3-208ENST00000562626 NRG2O14511 850 aaPredicted RBP10.46□□□□□ -0.73
CLK3-208ENST00000562626 P4HA2O15460 535 aa10.46□□□□□ -0.73
CLK3-208ENST00000562626 AP5Z1O43299 807 aa10.46□□□□□ -0.73
CLK3-208ENST00000562626 N4BP1O75113 896 aaKnown RBP10.46□□□□□ -0.73
CLK3-208ENST00000562626 GLUD1P00367 558 aa10.46□□□□□ -0.73
CLK3-208ENST00000562626 PNMA6AP0CW24 399 aaPredicted RBP10.46□□□□□ -0.73
CLK3-208ENST00000562626 CPB1P15086 417 aa10.46□□□□□ -0.73
CLK3-208ENST00000562626 PAX3P23760 479 aa10.46□□□□□ -0.73
CLK3-208ENST00000562626 GNL1P36915 607 aaPredicted RBP10.46□□□□□ -0.73
CLK3-208ENST00000562626 GPR15P49685 360 aa10.46□□□□□ -0.73
CLK3-208ENST00000562626 NDST1P52848 882 aa10.46□□□□□ -0.73
CLK3-208ENST00000562626 CACNA2D1P54289 1103 aa10.46□□□□□ -0.73
CLK3-208ENST00000562626 INCA1Q0VD86 236 aa10.46□□□□□ -0.73
CLK3-208ENST00000562626 GPR17Q13304 367 aa10.46□□□□□ -0.73
CLK3-208ENST00000562626 CUL2Q13617 745 aa10.46□□□□□ -0.73
CLK3-208ENST00000562626 ANKRD54Q6NXT1 300 aa10.46□□□□□ -0.73
CLK3-208ENST00000562626 TMEM184AQ6ZMB5 413 aa10.46□□□□□ -0.73
CLK3-208ENST00000562626 EP400NLQ6ZTU2 488 aa10.46□□□□□ -0.73
CLK3-208ENST00000562626 DPH6Q7L8W6 267 aa10.46□□□□□ -0.73
CLK3-208ENST00000562626 ACOT1Q86TX2 421 aa10.46□□□□□ -0.73
CLK3-208ENST00000562626 METTL23Q86XA0 190 aa10.46□□□□□ -0.73
CLK3-208ENST00000562626 ATAD1Q8NBU5 361 aa10.46□□□□□ -0.73
CLK3-208ENST00000562626 KREMEN2Q8NCW0 462 aa10.46□□□□□ -0.73
CLK3-208ENST00000562626 OR6B3Q8NGW1 331 aa10.46□□□□□ -0.73
CLK3-208ENST00000562626 ZNF461Q8TAF7 563 aa10.46□□□□□ -0.73
CLK3-208ENST00000562626 PABPC5Q96DU9 382 aaKnown RBP10.46□□□□□ -0.73
CLK3-208ENST00000562626 SYT15Q9BQS2 421 aa10.46□□□□□ -0.73
CLK3-208ENST00000562626 RBSNQ9H1K0 784 aa10.46□□□□□ -0.73
CLK3-208ENST00000562626 UBE2ZQ9H832 354 aaPredicted RBP10.46□□□□□ -0.73
CLK3-208ENST00000562626 DSEQ9UL01 958 aa10.46□□□□□ -0.73
CLK3-208ENST00000562626 SSX2IPQ9Y2D8 614 aa10.46□□□□□ -0.73
CLK3-208ENST00000562626 SIK3Q9Y2K2 1263 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms