RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 VSTM1Q6UX27 236 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 ZNF677Q86XU0 584 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 EFCAB13Q8IY85 973 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 DCP1BQ8IZD4 617 aaKnown RBP6.03□□□□□ -1.44
LINC01963-201ENST00000562038 CCDC150Q8NCX0 1101 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 STK32AQ8WU08 396 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 SYN2Q92777 582 aaPredicted RBP6.03□□□□□ -1.44
LINC01963-201ENST00000562038 SLC35C1Q96A29 364 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 C8orf48Q96LL4 319 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 MYRFLQ96LU7 910 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 KLHL5Q96PQ7 755 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 ERGIC2Q96RQ1 377 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 GAD1Q99259 594 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 ZBED2Q9BTP6 218 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 TTLL2Q9BWV7 592 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 VN1R3Q9BXE9 311 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 FGFBP2Q9BYJ0 223 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 NUCKS1Q9H1E3 243 aaKnown RBP6.03□□□□□ -1.44
LINC01963-201ENST00000562038 TRPV5Q9NQA5 729 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 TTLL13PA6NNM8 815 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 FOXD2O60548 495 aaPredicted RBP6.03□□□□□ -1.44
LINC01963-201ENST00000562038 CLASP2O75122 1294 aaKnown RBP6.03□□□□□ -1.44
LINC01963-201ENST00000562038 MYCP01106 439 aaPredicted RBP6.03□□□□□ -1.44
LINC01963-201ENST00000562038 ERBB2P04626 1255 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 AVPR2P30518 371 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 AFMP43652 599 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 CLCN4P51793 760 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 GPR17Q13304 367 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 ICE2Q659A1 982 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 METTL23Q86XA0 190 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 PDILTQ8N807 584 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 C1orf127Q8N9H9 656 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 LNX1Q8TBB1 728 aaPredicted RBP6.03□□□□□ -1.44
LINC01963-201ENST00000562038 C18orf25Q96B23 403 aaPredicted RBP6.03□□□□□ -1.44
LINC01963-201ENST00000562038 ZMAT2Q96NC0 199 aaKnown RBP6.03□□□□□ -1.44
LINC01963-201ENST00000562038 CBWD1Q9BRT8 395 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 TRIM62Q9BVG3 475 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 KIFC3Q9BVG8 833 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 GPR88Q9GZN0 384 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 MRPL17Q9NRX2 175 aaKnown RBP6.03□□□□□ -1.44
LINC01963-201ENST00000562038 ASNSD1Q9NWL6 643 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 ARMCX3Q9UH62 379 aaPredicted RBP6.03□□□□□ -1.44
LINC01963-201ENST00000562038 SIX4Q9UIU6 781 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 C2orf16Q68DN1 1984 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 EXOC3O60645 756 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 CXCL8P10145 99 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 SCNN1GP51170 649 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 ADAM9Q13443 819 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 BIRC2Q13490 618 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 CAMK1Q14012 370 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 TRIM14Q14142 442 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 TTC39BQ5VTQ0 682 aaPredicted RBP6.03□□□□□ -1.44
LINC01963-201ENST00000562038 ANKRD40Q6AI12 368 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 C1orf228Q6PIY5 440 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 RSPO2Q6UXX9 243 aaPredicted RBP6.03□□□□□ -1.44
LINC01963-201ENST00000562038 TRAPPC11Q7Z392 1133 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 THEM5Q8N1Q8 247 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 LMO3Q8TAP4 145 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 ZBTB10Q96DT7 871 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 KIF12Q96FN5 646 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 NIF3L1Q9GZT8 377 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 BLZF1Q9H2G9 400 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 CSNK1G1Q9HCP0 422 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 SLC39A2Q9NP94 309 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 MIOSQ9NXC5 875 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 EPS15L1Q9UBC2 864 aa6.03□□□□□ -1.44
LINC01963-201ENST00000562038 DYTNA2CJ06 578 aa6.02□□□□□ -1.45
LINC01963-201ENST00000562038 AKAP3O75969 853 aa6.02□□□□□ -1.45
LINC01963-201ENST00000562038 AFPP02771 609 aaKnown RBP6.02□□□□□ -1.45
LINC01963-201ENST00000562038 FGFR1P11362 822 aa6.02□□□□□ -1.45
LINC01963-201ENST00000562038 CDH5P33151 784 aaPredicted RBP6.02□□□□□ -1.45
LINC01963-201ENST00000562038 LILRA4P59901 499 aa6.02□□□□□ -1.45
LINC01963-201ENST00000562038 TPM4P67936 248 aa6.02□□□□□ -1.45
LINC01963-201ENST00000562038 MYL7Q01449 175 aa6.02□□□□□ -1.45
LINC01963-201ENST00000562038 TFF2Q03403 129 aa6.02□□□□□ -1.45
LINC01963-201ENST00000562038 ARMC3Q5W041 872 aa6.02□□□□□ -1.45
LINC01963-201ENST00000562038 DPY19L2P1Q6NXN4 242 aa6.02□□□□□ -1.45
LINC01963-201ENST00000562038 ANKRD54Q6NXT1 300 aa6.02□□□□□ -1.45
LINC01963-201ENST00000562038 SASS6Q6UVJ0 657 aa6.02□□□□□ -1.45
LINC01963-201ENST00000562038 SUGP1Q8IWZ8 645 aaKnown RBP6.02□□□□□ -1.45
LINC01963-201ENST00000562038 KLHL23Q8NBE8 558 aa6.02□□□□□ -1.45
LINC01963-201ENST00000562038 FBXL13Q8NEE6 735 aa6.02□□□□□ -1.45
LINC01963-201ENST00000562038 ANKRD20A12PQ8NF67 263 aa6.02□□□□□ -1.45
LINC01963-201ENST00000562038 FNBP1Q96RU3 617 aa6.02□□□□□ -1.45
LINC01963-201ENST00000562038 CDK5RAP1Q96SZ6 601 aaKnown RBP6.02□□□□□ -1.45
LINC01963-201ENST00000562038 RNF39Q9H2S5 420 aa6.02□□□□□ -1.45
LINC01963-201ENST00000562038 PARP2Q9UGN5 583 aa6.02□□□□□ -1.45
LINC01963-201ENST00000562038 MYO16Q9Y6X6 1858 aa6.02□□□□□ -1.45
LINC01963-201ENST00000562038 KPNA7A9QM74 516 aa6.02□□□□□ -1.45
LINC01963-201ENST00000562038 LRP3O75074 770 aa6.02□□□□□ -1.45
LINC01963-201ENST00000562038 TPM2P07951 284 aa6.02□□□□□ -1.45
LINC01963-201ENST00000562038 NFICP08651 508 aa6.02□□□□□ -1.45
LINC01963-201ENST00000562038 TMEM191BP0C7N4 346 aa6.02□□□□□ -1.45
LINC01963-201ENST00000562038 CD44P16070 742 aaKnown RBP6.02□□□□□ -1.45
LINC01963-201ENST00000562038 MLLT3P42568 568 aaPredicted RBP6.02□□□□□ -1.45
LINC01963-201ENST00000562038 FMO5P49326 533 aa6.02□□□□□ -1.45
LINC01963-201ENST00000562038 NOP14P78316 857 aaKnown RBP6.02□□□□□ -1.45
LINC01963-201ENST00000562038 PLEKHG6Q3KR16 790 aa6.02□□□□□ -1.45
LINC01963-201ENST00000562038 C4orf50Q6ZRC1 276 aa6.02□□□□□ -1.45
LINC01963-201ENST00000562038 SLC39A13Q96H72 371 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms