RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 RAB33AQ14088 237 aa5.91□□□□□ -1.46
HERC1-213ENST00000561359 HNRNPDQ14103 355 aaKnown RBP5.91□□□□□ -1.46
HERC1-213ENST00000561359 IMMTQ16891 758 aaKnown RBP5.91□□□□□ -1.46
HERC1-213ENST00000561359 USP39Q53GS9 565 aaKnown RBP5.91□□□□□ -1.46
HERC1-213ENST00000561359 PRSS36Q5K4E3 855 aa5.91□□□□□ -1.46
HERC1-213ENST00000561359 CYP4A22Q5TCH4 519 aa5.91□□□□□ -1.46
HERC1-213ENST00000561359 PMS2CLQ68D20 193 aa5.91□□□□□ -1.46
HERC1-213ENST00000561359 ZNF746Q6NUN9 644 aaPredicted RBP5.91□□□□□ -1.46
HERC1-213ENST00000561359 PDXDC1Q6P996 788 aa5.91□□□□□ -1.46
HERC1-213ENST00000561359 RTL10Q7L3V2 364 aa5.91□□□□□ -1.46
HERC1-213ENST00000561359 DHX32Q7L7V1 743 aaKnown RBP5.91□□□□□ -1.46
HERC1-213ENST00000561359 CATIPQ7Z7H3 387 aa5.91□□□□□ -1.46
HERC1-213ENST00000561359 ZNF410Q86VK4 478 aa5.91□□□□□ -1.46
HERC1-213ENST00000561359 PLA2G4DQ86XP0 818 aa5.91□□□□□ -1.46
HERC1-213ENST00000561359 SMAP1Q8IYB5 467 aaPredicted RBP5.91□□□□□ -1.46
HERC1-213ENST00000561359 TMEFF1Q8IYR6 380 aa5.91□□□□□ -1.46
HERC1-213ENST00000561359 ABCA7Q8IZY2 2146 aa5.91□□□□□ -1.46
HERC1-213ENST00000561359 CCDC82Q8N4S0 544 aa5.91□□□□□ -1.46
HERC1-213ENST00000561359 LSM14AQ8ND56 463 aaKnown RBP5.91□□□□□ -1.46
HERC1-213ENST00000561359 CNNM3Q8NE01 707 aa5.91□□□□□ -1.46
HERC1-213ENST00000561359 LNX1Q8TBB1 728 aaPredicted RBP5.91□□□□□ -1.46
HERC1-213ENST00000561359 ZSCAN18Q8TBC5 510 aaPredicted RBP5.91□□□□□ -1.46
HERC1-213ENST00000561359 ADAMTS14Q8WXS8 1223 aa5.91□□□□□ -1.46
HERC1-213ENST00000561359 PGBD1Q96JS3 809 aa5.91□□□□□ -1.46
HERC1-213ENST00000561359 GTPBP2Q9BX10 602 aaKnown RBP5.91□□□□□ -1.46
HERC1-213ENST00000561359 SPZ1Q9BXG8 430 aa5.91□□□□□ -1.46
HERC1-213ENST00000561359 MIOSQ9NXC5 875 aa5.91□□□□□ -1.46
HERC1-213ENST00000561359 GTSE1Q9NYZ3 720 aa5.91□□□□□ -1.46
HERC1-213ENST00000561359 SUCLA2Q9P2R7 463 aaPredicted RBP5.91□□□□□ -1.46
HERC1-213ENST00000561359 CACNG4Q9UBN1 327 aa5.91□□□□□ -1.46
HERC1-213ENST00000561359 EVLQ9UI08 416 aaPredicted RBP5.91□□□□□ -1.46
HERC1-213ENST00000561359 GOLGA4Q13439 2230 aaKnown RBP5.91□□□□□ -1.46
HERC1-213ENST00000561359 SHROOM3Q8TF72 1996 aa5.91□□□□□ -1.46
HERC1-213ENST00000561359 NOTCH4Q99466 2003 aa5.91□□□□□ -1.46
HERC1-213ENST00000561359 ANKRD17O75179 2603 aaKnown RBP5.9□□□□□ -1.46
HERC1-213ENST00000561359 MGAQ8IWI9 3026 aa5.9□□□□□ -1.46
HERC1-213ENST00000561359 DHX15O43143 795 aaKnown RBP5.9□□□□□ -1.46
HERC1-213ENST00000561359 OPHN1O60890 802 aa5.9□□□□□ -1.46
HERC1-213ENST00000561359 APBB3O95704 486 aa5.9□□□□□ -1.46
HERC1-213ENST00000561359 CFIP05156 583 aa5.9□□□□□ -1.46
HERC1-213ENST00000561359 FTH1P19P0C7X4 201 aa5.9□□□□□ -1.46
HERC1-213ENST00000561359 CCR2P41597 374 aa5.9□□□□□ -1.46
HERC1-213ENST00000561359 DGKEP52429 567 aa5.9□□□□□ -1.46
HERC1-213ENST00000561359 CFHR1Q03591 330 aa5.9□□□□□ -1.46
HERC1-213ENST00000561359 GRSF1Q12849 480 aaKnown RBP eCLIP5.9□□□□□ -1.46
HERC1-213ENST00000561359 HSP90AA2PQ14568 343 aaPredicted RBP5.9□□□□□ -1.46
HERC1-213ENST00000561359 TRIP6Q15654 476 aaKnown RBP5.9□□□□□ -1.46
HERC1-213ENST00000561359 MAPK6Q16659 721 aa5.9□□□□□ -1.46
HERC1-213ENST00000561359 MTERF2Q49AM1 385 aa5.9□□□□□ -1.46
HERC1-213ENST00000561359 UBXN11Q5T124 520 aa5.9□□□□□ -1.46
HERC1-213ENST00000561359 C20orf204Q6ZNR8 217 aa5.9□□□□□ -1.46
HERC1-213ENST00000561359 CYB5R4Q7L1T6 521 aa5.9□□□□□ -1.46
HERC1-213ENST00000561359 HAUS6Q7Z4H7 955 aa5.9□□□□□ -1.46
HERC1-213ENST00000561359 C11orf74Q86VG3 221 aa5.9□□□□□ -1.46
HERC1-213ENST00000561359 KSR1Q8IVT5 923 aa5.9□□□□□ -1.46
HERC1-213ENST00000561359 ELMOD1Q8N336 334 aa5.9□□□□□ -1.46
HERC1-213ENST00000561359 SMG8Q8ND04 991 aaKnown RBP5.9□□□□□ -1.46
HERC1-213ENST00000561359 E2F7Q96AV8 911 aa5.9□□□□□ -1.46
HERC1-213ENST00000561359 ZFYVE19Q96K21 471 aa5.9□□□□□ -1.46
HERC1-213ENST00000561359 TMEM209Q96SK2 561 aa5.9□□□□□ -1.46
HERC1-213ENST00000561359 ARID3AQ99856 593 aa5.9□□□□□ -1.46
HERC1-213ENST00000561359 ZNF577Q9BSK1 485 aa5.9□□□□□ -1.46
HERC1-213ENST00000561359 DCTPP1Q9H773 170 aa5.9□□□□□ -1.46
HERC1-213ENST00000561359 TRPV4Q9HBA0 871 aa5.9□□□□□ -1.46
HERC1-213ENST00000561359 TBC1D22BQ9NU19 505 aa5.9□□□□□ -1.46
HERC1-213ENST00000561359 SNTG2Q9NY99 539 aa5.9□□□□□ -1.46
HERC1-213ENST00000561359 ZFATQ9P243 1243 aa5.9□□□□□ -1.46
HERC1-213ENST00000561359 DKK4Q9UBT3 224 aa5.9□□□□□ -1.46
HERC1-213ENST00000561359 MBD1Q9UIS9 605 aaPredicted RBP5.9□□□□□ -1.46
HERC1-213ENST00000561359 HES2Q9Y543 173 aa5.9□□□□□ -1.46
HERC1-213ENST00000561359 IPPQ9Y573 584 aa5.9□□□□□ -1.46
HERC1-213ENST00000561359 CDY1Q9Y6F8 540 aa5.9□□□□□ -1.46
HERC1-213ENST00000561359 NCANO14594 1321 aa5.9□□□□□ -1.47
HERC1-213ENST00000561359 ATMQ13315 3056 aa5.9□□□□□ -1.47
HERC1-213ENST00000561359 COL6A6A6NMZ7 2263 aa5.9□□□□□ -1.47
HERC1-213ENST00000561359 CREBBPQ92793 2442 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 hCG_1642624A0A1W2PR95 340 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 CASTOR2A6NHX0 329 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 WDR64B1ANS9 1081 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 ERLIN2O94905 339 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 FOSP01100 380 aaPredicted RBP5.89□□□□□ -1.47
HERC1-213ENST00000561359 SRGAP2CP0DJJ0 459 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 MYL4P12829 197 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 NID1P14543 1247 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 GJA1P17302 382 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 BCKDHBP21953 392 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 HOXA11P31270 313 aaPredicted RBP5.89□□□□□ -1.47
HERC1-213ENST00000561359 GATA4P43694 442 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 RAC1P63000 192 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 SPIRE1Q08AE8 756 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 ELAVL2Q12926 359 aaKnown RBP5.89□□□□□ -1.47
HERC1-213ENST00000561359 GRIK3Q13003 919 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 TRDNQ13061 729 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 SART3Q15020 963 aaKnown RBP5.89□□□□□ -1.47
HERC1-213ENST00000561359 IQCEQ6IPM2 695 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 CAPN12Q6ZSI9 719 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 NIPA1Q7RTP0 329 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 HEATR3Q7Z4Q2 680 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 ETFBKMTQ8IXQ9 262 aa5.89□□□□□ -1.47
HERC1-213ENST00000561359 HACE1Q8IYU2 909 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms