RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 SEPT5Q99719 369 aaPredicted RBP12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 LPIN3Q9BQK8 851 aa12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 PLA2G2FQ9BZM2 168 aa12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 DDX43Q9NXZ2 648 aaKnown RBP12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 ABI2Q9NYB9 513 aaPredicted RBP12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 HCN4Q9Y3Q4 1203 aa12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 NME7Q9Y5B8 376 aa12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 COL4A3Q01955 1670 aa12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 KRBA1A5PL33 1030 aa12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 GABRDO14764 452 aa12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 PRPF40AO75400 957 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 HAPLN1P10915 354 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 SRFP11831 508 aa12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 FCARP24071 287 aa12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 LMO2P25791 158 aa12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 GPR15P49685 360 aa12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 EPHB3P54753 998 aa12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 MYL6P60660 151 aa12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 GPC5P78333 572 aa12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 FAM160A1Q05DH4 1040 aa12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 TEAD2Q15562 447 aa12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 MGAT5BQ3V5L5 792 aa12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 FAM78AQ5JUQ0 283 aa12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 C1orf220Q5T0J3 134 aa12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 CYP4A22Q5TCH4 519 aa12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 TDRD10Q5VZ19 366 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 CEP135Q66GS9 1140 aa12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 TANGO2Q6ICL3 276 aa12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 SUGP1Q8IWZ8 645 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 SIX5Q8N196 739 aa12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 TMEM86AQ8N2M4 240 aa12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 GUF1Q8N442 669 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 TOP6BLQ8N6T0 577 aa12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 GIPC2Q8TF65 315 aa12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 TMEM174Q8WUU8 243 aa12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 ACBD6Q9BR61 282 aa12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 MRPL45Q9BRJ2 306 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 PI4K2AQ9BTU6 479 aa12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 XYLT2Q9H1B5 865 aa12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 ASAH2Q9NR71 780 aa12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 GDE1Q9NZC3 331 aa12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 GTF3C4Q9UKN8 822 aa12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 FBXL21Q9UKT6 434 aa12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 TRAF3IP3Q9Y228 551 aa12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 R3HCC1Q9Y3T6 440 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-216ENST00000560243 NCANO14594 1321 aa12.49□□□□□ -0.41
RABGGTA-216ENST00000560243 A0A1W2PRU2 124 aa12.49□□□□□ -0.41
RABGGTA-216ENST00000560243 MYBPHLA2RUH7 354 aa12.49□□□□□ -0.41
RABGGTA-216ENST00000560243 ZNF197O14709 1029 aa12.49□□□□□ -0.41
RABGGTA-216ENST00000560243 VNN1O95497 513 aa12.49□□□□□ -0.41
RABGGTA-216ENST00000560243 C4BPAP04003 597 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-216ENST00000560243 NPR3P17342 541 aa12.49□□□□□ -0.41
RABGGTA-216ENST00000560243 PSMC1P62191 440 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-216ENST00000560243 CLDN10P78369 228 aa12.49□□□□□ -0.41
RABGGTA-216ENST00000560243 MYL7Q01449 175 aa12.49□□□□□ -0.41
RABGGTA-216ENST00000560243 TSPY1Q01534 308 aa12.49□□□□□ -0.41
RABGGTA-216ENST00000560243 PLD1Q13393 1074 aa12.49□□□□□ -0.41
RABGGTA-216ENST00000560243 ZCWPW2Q504Y3 356 aa12.49□□□□□ -0.41
RABGGTA-216ENST00000560243 INTS6LQ5JSJ4 861 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-216ENST00000560243 STXBP5Q5T5C0 1151 aa12.49□□□□□ -0.41
RABGGTA-216ENST00000560243 SDHAF4Q5VUM1 108 aa12.49□□□□□ -0.41
RABGGTA-216ENST00000560243 GAREM2Q75VX8 874 aa12.49□□□□□ -0.41
RABGGTA-216ENST00000560243 MTSS1LQ765P7 747 aa12.49□□□□□ -0.41
RABGGTA-216ENST00000560243 GPIHBP1Q8IV16 184 aa12.49□□□□□ -0.41
RABGGTA-216ENST00000560243 DCP1BQ8IZD4 617 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-216ENST00000560243 TMEM105Q8N8V8 129 aa12.49□□□□□ -0.41
RABGGTA-216ENST00000560243 PSMG2Q969U7 264 aa12.49□□□□□ -0.41
RABGGTA-216ENST00000560243 EEF2KMTQ96G04 330 aa12.49□□□□□ -0.41
RABGGTA-216ENST00000560243 MMS19Q96T76 1030 aa12.49□□□□□ -0.41
RABGGTA-216ENST00000560243 HSFX1Q9UBD0 423 aa12.49□□□□□ -0.41
RABGGTA-216ENST00000560243 CA14Q9ULX7 337 aa12.49□□□□□ -0.41
RABGGTA-216ENST00000560243 PCDHB5Q9Y5E4 795 aa12.49□□□□□ -0.41
RABGGTA-216ENST00000560243 PI15O43692 258 aa12.48□□□□□ -0.41
RABGGTA-216ENST00000560243 CALUO43852 315 aaPredicted RBP12.48□□□□□ -0.41
RABGGTA-216ENST00000560243 PHACTR2O75167 634 aa12.48□□□□□ -0.41
RABGGTA-216ENST00000560243 AKAP3O75969 853 aa12.48□□□□□ -0.41
RABGGTA-216ENST00000560243 MICAL2O94851 1124 aa12.48□□□□□ -0.41
RABGGTA-216ENST00000560243 PDGFRBP09619 1106 aa12.48□□□□□ -0.41
RABGGTA-216ENST00000560243 NR2F2P24468 414 aa12.48□□□□□ -0.41
RABGGTA-216ENST00000560243 CYP2F1P24903 491 aa12.48□□□□□ -0.41
RABGGTA-216ENST00000560243 AVPR2P30518 371 aa12.48□□□□□ -0.41
RABGGTA-216ENST00000560243 VIPR2P41587 438 aa12.48□□□□□ -0.41
RABGGTA-216ENST00000560243 LHX1P48742 406 aa12.48□□□□□ -0.41
RABGGTA-216ENST00000560243 TUFMP49411 452 aaKnown RBP12.48□□□□□ -0.41
RABGGTA-216ENST00000560243 BIRC3Q13489 604 aa12.48□□□□□ -0.41
RABGGTA-216ENST00000560243 TRPC3Q13507 836 aa12.48□□□□□ -0.41
RABGGTA-216ENST00000560243 DDR2Q16832 855 aa12.48□□□□□ -0.41
RABGGTA-216ENST00000560243 WDR72Q3MJ13 1102 aa12.48□□□□□ -0.41
RABGGTA-216ENST00000560243 CWF19L1Q69YN2 538 aaKnown RBP12.48□□□□□ -0.41
RABGGTA-216ENST00000560243 DPH6Q7L8W6 267 aa12.48□□□□□ -0.41
RABGGTA-216ENST00000560243 FLCNQ8NFG4 579 aa12.48□□□□□ -0.41
RABGGTA-216ENST00000560243 FAM200AQ8TCP9 573 aa12.48□□□□□ -0.41
RABGGTA-216ENST00000560243 SPPL2BQ8TCT7 592 aa12.48□□□□□ -0.41
RABGGTA-216ENST00000560243 C2orf15Q8WU43 125 aaKnown RBP12.48□□□□□ -0.41
RABGGTA-216ENST00000560243 ASB16Q96NS5 453 aa12.48□□□□□ -0.41
RABGGTA-216ENST00000560243 MFSD1Q9H3U5 465 aa12.48□□□□□ -0.41
RABGGTA-216ENST00000560243 IL21Q9HBE4 155 aa12.48□□□□□ -0.41
RABGGTA-216ENST00000560243 CRTAC1Q9NQ79 661 aa12.48□□□□□ -0.41
RABGGTA-216ENST00000560243 SLC2A4RGQ9NR83 387 aa12.48□□□□□ -0.41
RABGGTA-216ENST00000560243 NXF1Q9UBU9 619 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms