RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 LHX1P48742 406 aa12.97□□□□□ -0.33
HERC1-205ENST00000559886 SLC11A1P49279 550 aa12.97□□□□□ -0.33
HERC1-205ENST00000559886 TRIM72Q6ZMU5 477 aa12.97□□□□□ -0.33
HERC1-205ENST00000559886 TMCO2Q7Z6W1 182 aaPredicted RBP12.97□□□□□ -0.33
HERC1-205ENST00000559886 ACOT1Q86TX2 421 aa12.97□□□□□ -0.33
HERC1-205ENST00000559886 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.97□□□□□ -0.332e-12■■■■□ 20
HERC1-205ENST00000559886 COLEC11Q9BWP8 271 aa12.97□□□□□ -0.33
HERC1-205ENST00000559886 LACRTQ9GZZ8 138 aa12.97□□□□□ -0.33
HERC1-205ENST00000559886 ISCUQ9H1K1 167 aa12.97□□□□□ -0.33
HERC1-205ENST00000559886 TAS2R14Q9NYV8 317 aa12.97□□□□□ -0.33
HERC1-205ENST00000559886 DSEQ9UL01 958 aa12.97□□□□□ -0.33
HERC1-205ENST00000559886 ZMYND8Q9ULU4 1186 aaPredicted RBP12.97□□□□□ -0.33
HERC1-205ENST00000559886 TFR2Q9UP52 801 aa12.97□□□□□ -0.33
HERC1-205ENST00000559886 FAN1Q9Y2M0 1017 aa12.97□□□□□ -0.33
HERC1-205ENST00000559886 VWA8A3KMH1 1905 aa12.97□□□□□ -0.33
HERC1-205ENST00000559886 ARHGEF37A1IGU5 675 aa12.96□□□□□ -0.33
HERC1-205ENST00000559886 PJA2O43164 708 aa12.96□□□□□ -0.33
HERC1-205ENST00000559886 MED7O43513 233 aa12.96□□□□□ -0.33
HERC1-205ENST00000559886 CYP1A1P04798 512 aaPredicted RBP12.96□□□□□ -0.33
HERC1-205ENST00000559886 GALTP07902 379 aa12.96□□□□□ -0.33
HERC1-205ENST00000559886 UNGP13051 313 aaPredicted RBP12.96□□□□□ -0.33
HERC1-205ENST00000559886 ARHGAP25P42331 645 aa12.96□□□□□ -0.33
HERC1-205ENST00000559886 CLEC16AQ2KHT3 1053 aa12.96□□□□□ -0.33
HERC1-205ENST00000559886 TXLNBQ8N3L3 684 aa12.96□□□□□ -0.33
HERC1-205ENST00000559886 DPF3Q92784 378 aa12.96□□□□□ -0.33
HERC1-205ENST00000559886 DNAI2Q9GZS0 605 aa12.96□□□□□ -0.33
HERC1-205ENST00000559886 CWH43Q9H720 699 aa12.96□□□□□ -0.33
HERC1-205ENST00000559886 INTUQ9ULD6 942 aa12.96□□□□□ -0.33
HERC1-205ENST00000559886 TIMM13Q9Y5L4 95 aaPredicted RBP12.96□□□□□ -0.33
HERC1-205ENST00000559886 ZBBXA8MT70 800 aa12.96□□□□□ -0.34
HERC1-205ENST00000559886 HCRTO43612 131 aa12.96□□□□□ -0.34
HERC1-205ENST00000559886 TRAPPC3O43617 180 aa12.96□□□□□ -0.34
HERC1-205ENST00000559886 RTN2O75298 545 aa12.96□□□□□ -0.34
HERC1-205ENST00000559886 TADA2AO75478 443 aa12.96□□□□□ -0.34
HERC1-205ENST00000559886 PDGFRBP09619 1106 aa12.96□□□□□ -0.34
HERC1-205ENST00000559886 TYMPP19971 482 aa12.96□□□□□ -0.34
HERC1-205ENST00000559886 BCAR1P56945 870 aa12.96□□□□□ -0.34
HERC1-205ENST00000559886 CNGA2Q16280 664 aa12.96□□□□□ -0.34
HERC1-205ENST00000559886 SGO2Q562F6 1265 aa12.96□□□□□ -0.34
HERC1-205ENST00000559886 FAM117BQ6P1L5 589 aa12.96□□□□□ -0.34
HERC1-205ENST00000559886 CMTR2Q8IYT2 770 aaKnown RBP12.96□□□□□ -0.34
HERC1-205ENST00000559886 CYFIP2Q96F07 1278 aa12.96□□□□□ -0.34
HERC1-205ENST00000559886 TNIP3Q96KP6 325 aa12.96□□□□□ -0.34
HERC1-205ENST00000559886 PACSIN1Q9BY11 444 aa12.96□□□□□ -0.34
HERC1-205ENST00000559886 PDCL3Q9H2J4 239 aa12.96□□□□□ -0.34
HERC1-205ENST00000559886 DPEP3Q9H4B8 488 aa12.96□□□□□ -0.34
HERC1-205ENST00000559886 LZTFL1Q9NQ48 299 aa12.96□□□□□ -0.34
HERC1-205ENST00000559886 MARCH5Q9NX47 278 aa12.96□□□□□ -0.34
HERC1-205ENST00000559886 ADAM28Q9UKQ2 775 aa12.96□□□□□ -0.34
HERC1-205ENST00000559886 PCDHB8Q9UN66 801 aa12.96□□□□□ -0.34
HERC1-205ENST00000559886 MYH10P35580 1976 aa12.95□□□□□ -0.34
HERC1-205ENST00000559886 TMCO5BA8MYB1 307 aa12.95□□□□□ -0.34
HERC1-205ENST00000559886 O00370 1275 aa12.95□□□□□ -0.34
HERC1-205ENST00000559886 LSM8O95777 96 aaKnown RBP12.95□□□□□ -0.34
HERC1-205ENST00000559886 ABL1P00519 1130 aa12.95□□□□□ -0.34
HERC1-205ENST00000559886 FTLP02792 175 aaPredicted RBP12.95□□□□□ -0.34
HERC1-205ENST00000559886 H2AFZP0C0S5 128 aa12.95□□□□□ -0.34
HERC1-205ENST00000559886 KIF5AQ12840 1032 aa12.95□□□□□ -0.34
HERC1-205ENST00000559886 STILQ15468 1287 aa12.95□□□□□ -0.34
HERC1-205ENST00000559886 ARHGAP29Q52LW3 1261 aa12.95□□□□□ -0.34
HERC1-205ENST00000559886 ACAD10Q6JQN1 1059 aa12.95□□□□□ -0.34
HERC1-205ENST00000559886 H2AFVQ71UI9 128 aa12.95□□□□□ -0.34
HERC1-205ENST00000559886 METTL23Q86XA0 190 aa12.95□□□□□ -0.34
HERC1-205ENST00000559886 DNAAF5Q86Y56 855 aa12.95□□□□□ -0.34
HERC1-205ENST00000559886 C12orf29Q8N999 325 aa12.95□□□□□ -0.34
HERC1-205ENST00000559886 HERVK_113Q902F9 699 aa12.95□□□□□ -0.34
HERC1-205ENST00000559886 LBHD1Q9BQE6 289 aaPredicted RBP12.95□□□□□ -0.34
HERC1-205ENST00000559886 LHX5Q9H2C1 402 aa12.95□□□□□ -0.34
HERC1-205ENST00000559886 DDX43Q9NXZ2 648 aaKnown RBP12.95□□□□□ -0.34
HERC1-205ENST00000559886 CXXC1Q9P0U4 656 aaPredicted RBP12.95□□□□□ -0.34
HERC1-205ENST00000559886 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.95□□□□□ -0.34
HERC1-205ENST00000559886 KIAA1671Q9BY89 1806 aa12.95□□□□□ -0.34
HERC1-205ENST00000559886 SSTR3P32745 418 aaPredicted RBP12.95□□□□□ -0.34
HERC1-205ENST00000559886 CDH5P33151 784 aaPredicted RBP12.95□□□□□ -0.34
HERC1-205ENST00000559886 GALCP54803 685 aa12.95□□□□□ -0.34
HERC1-205ENST00000559886 NOMO3P69849 1222 aa12.95□□□□□ -0.34
HERC1-205ENST00000559886 CENPCQ03188 943 aa12.95□□□□□ -0.34
HERC1-205ENST00000559886 PASD1Q8IV76 773 aa12.95□□□□□ -0.34
HERC1-205ENST00000559886 TSGA10Q9BZW7 698 aa12.95□□□□□ -0.34
HERC1-205ENST00000559886 KRT86O43790 486 aa12.94□□□□□ -0.34
HERC1-205ENST00000559886 GJB5O95377 273 aa12.94□□□□□ -0.34
HERC1-205ENST00000559886 ALDH7A1P49419 539 aaKnown RBP12.94□□□□□ -0.34
HERC1-205ENST00000559886 NAA35Q5VZE5 725 aa12.94□□□□□ -0.34
HERC1-205ENST00000559886 ARHGAP17Q68EM7 881 aa12.94□□□□□ -0.34
HERC1-205ENST00000559886 LCLAT1Q6UWP7 414 aa12.94□□□□□ -0.34
HERC1-205ENST00000559886 NYAP1Q6ZVC0 841 aa12.94□□□□□ -0.34
HERC1-205ENST00000559886 B3GALNT2Q8NCR0 500 aa12.94□□□□□ -0.34
HERC1-205ENST00000559886 RTP3Q9BQQ7 232 aa12.94□□□□□ -0.34
HERC1-205ENST00000559886 ZNF518BQ9C0D4 1074 aa12.94□□□□□ -0.34
HERC1-205ENST00000559886 TRIM10Q9UDY6 481 aa12.94□□□□□ -0.34
HERC1-205ENST00000559886 DUSP10Q9Y6W6 482 aa12.94□□□□□ -0.34
HERC1-205ENST00000559886 ANKRD62A6NC57 917 aa12.94□□□□□ -0.34
HERC1-205ENST00000559886 SYN3O14994 580 aa12.94□□□□□ -0.34
HERC1-205ENST00000559886 MICAL2O94851 1124 aa12.94□□□□□ -0.34
HERC1-205ENST00000559886 PTPN1P18031 435 aaKnown RBP12.94□□□□□ -0.34
HERC1-205ENST00000559886 PCSK1P29120 753 aa12.94□□□□□ -0.34
HERC1-205ENST00000559886 PBX3P40426 434 aa12.94□□□□□ -0.34
HERC1-205ENST00000559886 HTRA4P83105 476 aaPredicted RBP12.94□□□□□ -0.34
HERC1-205ENST00000559886 BTG3Q14201 252 aaPredicted RBP12.94□□□□□ -0.34
HERC1-205ENST00000559886 PPP1R26Q5T8A7 1209 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms