RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 NELL2Q99435 816 aa4.76□□□□□ -1.65
SPG11-218ENST00000559754 TINAGL1Q9GZM7 467 aaPredicted RBP4.76□□□□□ -1.65
SPG11-218ENST00000559754 MRPL46Q9H2W6 279 aaKnown RBP4.76□□□□□ -1.65
SPG11-218ENST00000559754 DDX56Q9NY93 547 aaKnown RBP4.76□□□□□ -1.65
SPG11-218ENST00000559754 CHPF2Q9P2E5 772 aa4.76□□□□□ -1.65
SPG11-218ENST00000559754 LUC7L2Q9Y383 392 aaKnown RBP4.76□□□□□ -1.65
SPG11-218ENST00000559754 RIPOR2Q9Y4F9 1068 aa4.76□□□□□ -1.65
SPG11-218ENST00000559754 ADGRA2Q96PE1 1338 aa4.75□□□□□ -1.65
SPG11-218ENST00000559754 PRSS29PA6NIE9 313 aa4.75□□□□□ -1.65
SPG11-218ENST00000559754 LINC00473A8K010 186 aa4.75□□□□□ -1.65
SPG11-218ENST00000559754 NXPH3O95157 252 aa4.75□□□□□ -1.65
SPG11-218ENST00000559754 TYRP14679 529 aa4.75□□□□□ -1.65
SPG11-218ENST00000559754 CD6P30203 668 aa4.75□□□□□ -1.65
SPG11-218ENST00000559754 PHKA1P46020 1223 aa4.75□□□□□ -1.65
SPG11-218ENST00000559754 MAP2K6P52564 334 aa4.75□□□□□ -1.65
SPG11-218ENST00000559754 RBM20Q5T481 1227 aaKnown RBP4.75□□□□□ -1.65
SPG11-218ENST00000559754 ZNF788Q6ZQV5 615 aa4.75□□□□□ -1.65
SPG11-218ENST00000559754 PPP1R32Q7Z5V6 425 aa4.75□□□□□ -1.65
SPG11-218ENST00000559754 BRIX1Q8TDN6 353 aaKnown RBP4.75□□□□□ -1.65
SPG11-218ENST00000559754 HASPINQ8TF76 798 aa4.75□□□□□ -1.65
SPG11-218ENST00000559754 FKBP10Q96AY3 582 aa4.75□□□□□ -1.65
SPG11-218ENST00000559754 FAM136AQ96C01 138 aa4.75□□□□□ -1.65
SPG11-218ENST00000559754 ACTRT3Q9BYD9 372 aa4.75□□□□□ -1.65
SPG11-218ENST00000559754 AMBRA1Q9C0C7 1298 aa4.75□□□□□ -1.65
SPG11-218ENST00000559754 TCF7L1Q9HCS4 588 aa4.75□□□□□ -1.65
SPG11-218ENST00000559754 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.75□□□□□ -1.65
SPG11-218ENST00000559754 TYW1Q9NV66 732 aaKnown RBP4.75□□□□□ -1.65
SPG11-218ENST00000559754 PNPOQ9NVS9 261 aa4.75□□□□□ -1.65
SPG11-218ENST00000559754 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.74□□□□□ -1.65
SPG11-218ENST00000559754 LOC102724159A0A0B4J2E5 919 aa4.74□□□□□ -1.65
SPG11-218ENST00000559754 M0QYG6 137 aa4.74□□□□□ -1.65
SPG11-218ENST00000559754 VPS4BO75351 444 aa4.74□□□□□ -1.65
SPG11-218ENST00000559754 KIF20AO95235 890 aa4.74□□□□□ -1.65
SPG11-218ENST00000559754 NR2F6P10588 404 aa4.74□□□□□ -1.65
SPG11-218ENST00000559754 ZFXP17010 805 aaPredicted RBP4.74□□□□□ -1.65
SPG11-218ENST00000559754 GCLCP48506 637 aaPredicted RBP4.74□□□□□ -1.65
SPG11-218ENST00000559754 NEK2P51955 445 aa4.74□□□□□ -1.65
SPG11-218ENST00000559754 BMPR2Q13873 1038 aa4.74□□□□□ -1.65
SPG11-218ENST00000559754 PWP2Q15269 919 aaKnown RBP4.74□□□□□ -1.65
SPG11-218ENST00000559754 KIAA1614Q5VZ46 1190 aa4.74□□□□□ -1.65
SPG11-218ENST00000559754 FAM160B1Q5W0V3 765 aa4.74□□□□□ -1.65
SPG11-218ENST00000559754 SFRP4Q6FHJ7 346 aaPredicted RBP4.74□□□□□ -1.65
SPG11-218ENST00000559754 SRRM1Q8IYB3 904 aaKnown RBP4.74□□□□□ -1.65
SPG11-218ENST00000559754 FBXO41Q8TF61 875 aa4.74□□□□□ -1.65
SPG11-218ENST00000559754 ATRIPQ8WXE1 791 aa4.74□□□□□ -1.65
SPG11-218ENST00000559754 MVB12AQ96EY5 273 aa4.74□□□□□ -1.65
SPG11-218ENST00000559754 PSMD1Q99460 953 aa4.74□□□□□ -1.65
SPG11-218ENST00000559754 SMOC2Q9H3U7 446 aa4.74□□□□□ -1.65
SPG11-218ENST00000559754 MYH16Q9H6N6 1097 aa4.74□□□□□ -1.65
SPG11-218ENST00000559754 SLC52A1Q9NWF4 448 aa4.74□□□□□ -1.65
SPG11-218ENST00000559754 AGAP1Q9UPQ3 857 aa4.74□□□□□ -1.65
SPG11-218ENST00000559754 ANKRD6Q9Y2G4 727 aa4.74□□□□□ -1.65
SPG11-218ENST00000559754 VWC2LB2RUY7 222 aa4.73□□□□□ -1.65
SPG11-218ENST00000559754 H3BUI4 141 aa4.73□□□□□ -1.65
SPG11-218ENST00000559754 S100BP04271 92 aaPredicted RBP4.73□□□□□ -1.65
SPG11-218ENST00000559754 RHOP08100 348 aa4.73□□□□□ -1.65
SPG11-218ENST00000559754 ELFN1P0C7U0 828 aa4.73□□□□□ -1.65
SPG11-218ENST00000559754 CHRM3P20309 590 aa4.73□□□□□ -1.65
SPG11-218ENST00000559754 ITPKBP27987 946 aa4.73□□□□□ -1.65
SPG11-218ENST00000559754 FOXF2Q12947 444 aa4.73□□□□□ -1.65
SPG11-218ENST00000559754 AMOTQ4VCS5 1084 aa4.73□□□□□ -1.65
SPG11-218ENST00000559754 EMC10Q5UCC4 262 aa4.73□□□□□ -1.65
SPG11-218ENST00000559754 FCRLBQ6BAA4 426 aa4.73□□□□□ -1.65
SPG11-218ENST00000559754 SUMO4Q6EEV6 95 aa4.73□□□□□ -1.65
SPG11-218ENST00000559754 ZNF551Q7Z340 670 aaPredicted RBP4.73□□□□□ -1.65
SPG11-218ENST00000559754 CATIPQ7Z7H3 387 aa4.73□□□□□ -1.65
SPG11-218ENST00000559754 PPP1R3BQ86XI6 285 aa4.73□□□□□ -1.65
SPG11-218ENST00000559754 RASAL3Q86YV0 1011 aa4.73□□□□□ -1.65
SPG11-218ENST00000559754 FAM109AQ8N4B1 249 aa4.73□□□□□ -1.65
SPG11-218ENST00000559754 SH2D3CQ8N5H7 860 aa4.73□□□□□ -1.65
SPG11-218ENST00000559754 STAG1Q8WVM7 1258 aa4.73□□□□□ -1.65
SPG11-218ENST00000559754 RFKQ969G6 155 aa4.73□□□□□ -1.65
SPG11-218ENST00000559754 MTFMTQ96DP5 389 aaKnown RBP4.73□□□□□ -1.65
SPG11-218ENST00000559754 CDK5RAP3Q96JB5 506 aa4.73□□□□□ -1.65
SPG11-218ENST00000559754 MOGAT1Q96PD6 335 aa4.73□□□□□ -1.65
SPG11-218ENST00000559754 MAP3K14Q99558 947 aa4.73□□□□□ -1.65
SPG11-218ENST00000559754 SARS2Q9NP81 518 aaKnown RBP4.73□□□□□ -1.65
SPG11-218ENST00000559754 SERTAD4Q9NUC0 356 aa4.73□□□□□ -1.65
SPG11-218ENST00000559754 ST3GAL5Q9UNP4 418 aa4.73□□□□□ -1.65
SPG11-218ENST00000559754 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.73□□□□□ -1.65
SPG11-218ENST00000559754 PCDHA1Q9Y5I3 950 aa4.73□□□□□ -1.65
SPG11-218ENST00000559754 TPD52L2O43399 206 aaKnown RBP4.72□□□□□ -1.65
SPG11-218ENST00000559754 PDGFRBP09619 1106 aa4.72□□□□□ -1.65
SPG11-218ENST00000559754 CT47B1P0C2W7 299 aaPredicted RBP4.72□□□□□ -1.65
SPG11-218ENST00000559754 ATXN1LP0C7T5 689 aaKnown RBP4.72□□□□□ -1.65
SPG11-218ENST00000559754 PIM1P11309 404 aaPredicted RBP4.72□□□□□ -1.65
SPG11-218ENST00000559754 NDUFB7P17568 137 aa4.72□□□□□ -1.65
SPG11-218ENST00000559754 CCT8P50990 548 aa4.72□□□□□ -1.65
SPG11-218ENST00000559754 PROK1P58294 105 aa4.72□□□□□ -1.65
SPG11-218ENST00000559754 NKX6-1P78426 367 aaPredicted RBP4.72□□□□□ -1.65
SPG11-218ENST00000559754 TBCCQ15814 346 aa4.72□□□□□ -1.65
SPG11-218ENST00000559754 ZNF618Q5T7W0 954 aa4.72□□□□□ -1.65
SPG11-218ENST00000559754 ICE2Q659A1 982 aa4.72□□□□□ -1.65
SPG11-218ENST00000559754 LAYNQ6UX15 382 aa4.72□□□□□ -1.65
SPG11-218ENST00000559754 AMIGO2Q86SJ2 522 aa4.72□□□□□ -1.65
SPG11-218ENST00000559754 CAMKK1Q8N5S9 505 aa4.72□□□□□ -1.65
SPG11-218ENST00000559754 FAM46DQ8NEK8 389 aa4.72□□□□□ -1.65
SPG11-218ENST00000559754 GTPBP4Q9BZE4 634 aaKnown RBP4.72□□□□□ -1.65
SPG11-218ENST00000559754 ARHGEF3Q9NR81 526 aa4.72□□□□□ -1.65
SPG11-218ENST00000559754 AASDHPPTQ9NRN7 309 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms