RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 ABLIM3O94929 683 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 SEC24AO95486 1093 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 C4BPAP04003 597 aaKnown RBP9.61□□□□□ -0.87
SPG11-207ENST00000558138 CCDC192P0DO97 292 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 MYL4P12829 197 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 PTPN2P17706 415 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 GNL1P36915 607 aaPredicted RBP9.61□□□□□ -0.87
SPG11-207ENST00000558138 RAP1GAPP47736 663 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 TUFMP49411 452 aaKnown RBP9.61□□□□□ -0.87
SPG11-207ENST00000558138 NTHL1P78549 312 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 SMARCB1Q12824 385 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 MAPRE1Q15691 268 aaKnown RBP9.61□□□□□ -0.87
SPG11-207ENST00000558138 NFE2Q16621 373 aaPredicted RBP9.61□□□□□ -0.87
SPG11-207ENST00000558138 SOWAHAQ2M3V2 549 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 ZACNQ401N2 412 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 INTS6LQ5JSJ4 861 aaKnown RBP9.61□□□□□ -0.87
SPG11-207ENST00000558138 KRT39Q6A163 491 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 SCARA3Q6AZY7 606 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 SASS6Q6UVJ0 657 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 C4orf50Q6ZRC1 276 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 RTL10Q7L3V2 364 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 DPH6Q7L8W6 267 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 ITIH5Q86UX2 942 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 SCN4BQ8IWT1 228 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 TCEAL8Q8IYN2 117 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 PLCD3Q8N3E9 789 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 ATAD1Q8NBU5 361 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 SPATA18Q8TC71 538 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 SPPL2BQ8TCT7 592 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 C2orf15Q8WU43 125 aaKnown RBP9.61□□□□□ -0.87
SPG11-207ENST00000558138 TMEM174Q8WUU8 243 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 ING5Q8WYH8 240 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 TAF4BQ92750 862 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 ZNF707Q96C28 371 aaPredicted RBP9.61□□□□□ -0.87
SPG11-207ENST00000558138 BORCS6Q96GS4 357 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 SYT15Q9BQS2 421 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 ACBD6Q9BR61 282 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 MRPL45Q9BRJ2 306 aaKnown RBP9.61□□□□□ -0.87
SPG11-207ENST00000558138 MED10Q9BTT4 135 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 PI4K2AQ9BTU6 479 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 SLITRK6Q9H5Y7 841 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 SMYD3Q9H7B4 428 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 WDR6Q9NNW5 1121 aaKnown RBP9.61□□□□□ -0.87
SPG11-207ENST00000558138 HCFC1R1Q9NWW0 138 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 MAGEC2Q9UBF1 373 aaPredicted RBP9.61□□□□□ -0.87
SPG11-207ENST00000558138 CDH9Q9ULB4 789 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 UNC80Q8N2C7 3258 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 C2orf16Q68DN1 1984 aa9.61□□□□□ -0.87
SPG11-207ENST00000558138 ATP8B3O60423 1300 aa9.6□□□□□ -0.87
SPG11-207ENST00000558138 PES1O00541 588 aaKnown RBP9.6□□□□□ -0.87
SPG11-207ENST00000558138 ZNF197O14709 1029 aa9.6□□□□□ -0.87
SPG11-207ENST00000558138 N4BP1O75113 896 aaKnown RBP9.6□□□□□ -0.87
SPG11-207ENST00000558138 GNA14O95837 355 aa9.6□□□□□ -0.87
SPG11-207ENST00000558138 RHOP08100 348 aa9.6□□□□□ -0.87
SPG11-207ENST00000558138 BMP6P22004 513 aa9.6□□□□□ -0.87
SPG11-207ENST00000558138 WARSP23381 471 aaKnown RBP9.6□□□□□ -0.87
SPG11-207ENST00000558138 ANXA13P27216 316 aa9.6□□□□□ -0.87
SPG11-207ENST00000558138 GTF2H1P32780 548 aa9.6□□□□□ -0.87
SPG11-207ENST00000558138 NLRP12P59046 1061 aa9.6□□□□□ -0.87
SPG11-207ENST00000558138 NOP14P78316 857 aaKnown RBP9.6□□□□□ -0.87
SPG11-207ENST00000558138 PPP3CAQ08209 521 aa9.6□□□□□ -0.87
SPG11-207ENST00000558138 MDH1BQ5I0G3 518 aa9.6□□□□□ -0.87
SPG11-207ENST00000558138 CCDC183Q5T5S1 534 aa9.6□□□□□ -0.87
SPG11-207ENST00000558138 SPOPLQ6IQ16 392 aa9.6□□□□□ -0.87
SPG11-207ENST00000558138 FILIP1Q7Z7B0 1213 aa9.6□□□□□ -0.87
SPG11-207ENST00000558138 OSTM1Q86WC4 334 aa9.6□□□□□ -0.87
SPG11-207ENST00000558138 RNF135Q8IUD6 432 aa9.6□□□□□ -0.87
SPG11-207ENST00000558138 MLKLQ8NB16 471 aa9.6□□□□□ -0.87
SPG11-207ENST00000558138 CXorf38Q8TB03 319 aa9.6□□□□□ -0.87
SPG11-207ENST00000558138 FEZF2Q8TBJ5 459 aa9.6□□□□□ -0.87
SPG11-207ENST00000558138 GPT2Q8TD30 523 aa9.6□□□□□ -0.87
SPG11-207ENST00000558138 GIPC2Q8TF65 315 aa9.6□□□□□ -0.87
SPG11-207ENST00000558138 ELMO3Q96BJ8 720 aa9.6□□□□□ -0.87
SPG11-207ENST00000558138 SRRTQ9BXP5 876 aaKnown RBP9.6□□□□□ -0.87
SPG11-207ENST00000558138 DNMT3BQ9UBC3 853 aaKnown RBP9.6□□□□□ -0.87
SPG11-207ENST00000558138 MUTYHQ9UIF7 546 aa9.6□□□□□ -0.87
SPG11-207ENST00000558138 RWDD2AQ9UIY3 292 aa9.6□□□□□ -0.87
SPG11-207ENST00000558138 GTF3C4Q9UKN8 822 aa9.6□□□□□ -0.87
SPG11-207ENST00000558138 MAGED2Q9UNF1 606 aaPredicted RBP9.6□□□□□ -0.87
SPG11-207ENST00000558138 SPTBN5Q9NRC6 3674 aaKnown RBP9.6□□□□□ -0.87
SPG11-207ENST00000558138 XIRP2A4UGR9 3374 aa9.59□□□□□ -0.87
SPG11-207ENST00000558138 LOC730098B7Z3J9 87 aa9.59□□□□□ -0.87
SPG11-207ENST00000558138 HCRTO43612 131 aa9.59□□□□□ -0.87
SPG11-207ENST00000558138 TACC1O75410 805 aa9.59□□□□□ -0.87
SPG11-207ENST00000558138 VNN1O95497 513 aa9.59□□□□□ -0.87
SPG11-207ENST00000558138 STAU1O95793 577 aaKnown RBP9.59□□□□□ -0.87
SPG11-207ENST00000558138 ALADP13716 330 aa9.59□□□□□ -0.87
SPG11-207ENST00000558138 CD58P19256 250 aa9.59□□□□□ -0.87
SPG11-207ENST00000558138 GRIK1P39086 918 aa9.59□□□□□ -0.87
SPG11-207ENST00000558138 MTIF2P46199 727 aaKnown RBP9.59□□□□□ -0.87
SPG11-207ENST00000558138 CDH8P55286 799 aa9.59□□□□□ -0.87
SPG11-207ENST00000558138 RPL10AP62906 217 aaKnown RBP9.59□□□□□ -0.87
SPG11-207ENST00000558138 CLDN10P78369 228 aa9.59□□□□□ -0.87
SPG11-207ENST00000558138 ENPEPQ07075 957 aa9.59□□□□□ -0.87
SPG11-207ENST00000558138 LRMPQ12912 555 aa9.59□□□□□ -0.87
SPG11-207ENST00000558138 TTI2Q6NXR4 508 aa9.59□□□□□ -0.87
SPG11-207ENST00000558138 FRMD5Q7Z6J6 570 aa9.59□□□□□ -0.87
SPG11-207ENST00000558138 FAM114A1Q8IWE2 563 aa9.59□□□□□ -0.87
SPG11-207ENST00000558138 TTC9BQ8N6N2 239 aa9.59□□□□□ -0.87
SPG11-207ENST00000558138 FBXL13Q8NEE6 735 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms