RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 A8MXQ7 604 aa16.32■□□□□ 0.2
NEDD1-213ENST00000557644 H7C4K7 107 aa16.32■□□□□ 0.2
NEDD1-213ENST00000557644 INCA1Q0VD86 236 aa16.32■□□□□ 0.2
NEDD1-213ENST00000557644 SARM1Q6SZW1 724 aa16.32■□□□□ 0.2
NEDD1-213ENST00000557644 LRRTM3Q86VH5 581 aa16.32■□□□□ 0.2
NEDD1-213ENST00000557644 THEM5Q8N1Q8 247 aa16.32■□□□□ 0.2
NEDD1-213ENST00000557644 WHAMMQ8TF30 809 aa16.32■□□□□ 0.2
NEDD1-213ENST00000557644 MYLIPQ8WY64 445 aa16.32■□□□□ 0.2
NEDD1-213ENST00000557644 FAXDC2Q96IV6 333 aa16.32■□□□□ 0.2
NEDD1-213ENST00000557644 GUCD1Q96NT3 240 aa16.32■□□□□ 0.2
NEDD1-213ENST00000557644 KLHL5Q96PQ7 755 aa16.32■□□□□ 0.2
NEDD1-213ENST00000557644 CDX2Q99626 313 aaPredicted RBP16.32■□□□□ 0.2
NEDD1-213ENST00000557644 CILPO75339 1184 aa16.31■□□□□ 0.2
NEDD1-213ENST00000557644 PNMA6AP0CW24 399 aaPredicted RBP16.31■□□□□ 0.2
NEDD1-213ENST00000557644 ACO1P21399 889 aaKnown RBP16.31■□□□□ 0.2
NEDD1-213ENST00000557644 GTF2F1P35269 517 aaKnown RBP eCLIP16.31■□□□□ 0.2
NEDD1-213ENST00000557644 PBX1P40424 430 aa16.31■□□□□ 0.2
NEDD1-213ENST00000557644 PDE12Q6L8Q7 609 aaKnown RBP16.31■□□□□ 0.2
NEDD1-213ENST00000557644 PALB2Q86YC2 1186 aa16.31■□□□□ 0.2
NEDD1-213ENST00000557644 UBR7Q8N806 425 aa16.31■□□□□ 0.2
NEDD1-213ENST00000557644 TRIM5Q9C035 493 aa16.31■□□□□ 0.2
NEDD1-213ENST00000557644 BARX2Q9UMQ3 279 aaPredicted RBP16.31■□□□□ 0.2
NEDD1-213ENST00000557644 SSX2IPQ9Y2D8 614 aa16.31■□□□□ 0.2
NEDD1-213ENST00000557644 A0A1W2PQC6 194 aa16.31■□□□□ 0.2
NEDD1-213ENST00000557644 POLR2FP61218 127 aaKnown RBP16.31■□□□□ 0.2
NEDD1-213ENST00000557644 RAPGEF1Q13905 1077 aa16.31■□□□□ 0.2
NEDD1-213ENST00000557644 SLC8B1Q6J4K2 584 aa16.31■□□□□ 0.2
NEDD1-213ENST00000557644 PDXDC1Q6P996 788 aa16.31■□□□□ 0.2
NEDD1-213ENST00000557644 GPR65Q8IYL9 337 aa16.31■□□□□ 0.2
NEDD1-213ENST00000557644 ACBD6Q9BR61 282 aa16.31■□□□□ 0.2
NEDD1-213ENST00000557644 NAA15Q9BXJ9 866 aaKnown RBP16.31■□□□□ 0.2
NEDD1-213ENST00000557644 ELOVL4Q9GZR5 314 aa16.31■□□□□ 0.2
NEDD1-213ENST00000557644 NLRC4Q9NPP4 1024 aa16.31■□□□□ 0.2
NEDD1-213ENST00000557644 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.31■□□□□ 0.2
NEDD1-213ENST00000557644 FNIP2Q9P278 1114 aa16.31■□□□□ 0.2
NEDD1-213ENST00000557644 WDR27A2RRH5 827 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 FAM163BP0C2L3 166 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 KLRC2P26717 231 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 NRIP1P48552 1158 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 MFAP3P55082 362 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 ROR1Q01973 937 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 UVSSAQ2YD98 709 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 TCEAL5Q5H9L2 206 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 TMEM270Q6UE05 265 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 ACOT1Q86TX2 421 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 NEK11Q8NG66 645 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 SPATA18Q8TC71 538 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 PGLYRP2Q96PD5 576 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 SYT15Q9BQS2 421 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 EMILIN2Q9BXX0 1053 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 GPR88Q9GZN0 384 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 CRTAC1Q9NQ79 661 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 TMLHEQ9NVH6 421 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 GTF3C4Q9UKN8 822 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 PCDHB4Q9Y5E5 795 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 COL6A3P12111 3177 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 MYBPHLA2RUH7 354 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 OR6C75A6NL08 312 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 RNF225M0QZC1 329 aaPredicted RBP16.3■□□□□ 0.2
NEDD1-213ENST00000557644 CALCAP01258 141 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 CPB1P15086 417 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 PCSK1P29120 753 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 NDUFV1P49821 464 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 RBM10P98175 930 aaKnown RBP16.3■□□□□ 0.2
NEDD1-213ENST00000557644 SLC39A12Q504Y0 691 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 GPIHBP1Q8IV16 184 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 MICALL1Q8N3F8 863 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 GAS2L1Q99501 681 aaPredicted RBP16.3■□□□□ 0.2
NEDD1-213ENST00000557644 ZCWPW1Q9H0M4 648 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 TLE6Q9H808 572 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 MTMR10Q9NXD2 777 aa16.3■□□□□ 0.2
NEDD1-213ENST00000557644 CBFA2T2O43439 604 aa16.29■□□□□ 0.2
NEDD1-213ENST00000557644 CLASP2O75122 1294 aaKnown RBP16.29■□□□□ 0.2
NEDD1-213ENST00000557644 TPM3P06753 285 aa16.29■□□□□ 0.2
NEDD1-213ENST00000557644 SPATA31D3P0C874 917 aa16.29■□□□□ 0.2
NEDD1-213ENST00000557644 INTS6LQ5JSJ4 861 aaKnown RBP16.29■□□□□ 0.2
NEDD1-213ENST00000557644 RNF19BQ6ZMZ0 732 aa16.29■□□□□ 0.2
NEDD1-213ENST00000557644 SPATA31D4Q6ZUB0 917 aa16.29■□□□□ 0.2
NEDD1-213ENST00000557644 C12orf29Q8N999 325 aa16.29■□□□□ 0.2
NEDD1-213ENST00000557644 PKMYT1Q99640 499 aa16.29■□□□□ 0.2
NEDD1-213ENST00000557644 NSUN3Q9H649 340 aaKnown RBP16.29■□□□□ 0.2
NEDD1-213ENST00000557644 LMCD1Q9NZU5 365 aa16.29■□□□□ 0.2
NEDD1-213ENST00000557644 CDH9Q9ULB4 789 aa16.29■□□□□ 0.2
NEDD1-213ENST00000557644 FOXN3O00409 490 aaPredicted RBP16.29■□□□□ 0.2
NEDD1-213ENST00000557644 ADH1AP07327 375 aa16.29■□□□□ 0.2
NEDD1-213ENST00000557644 KRT5P13647 590 aa16.29■□□□□ 0.2
NEDD1-213ENST00000557644 TRIM21P19474 475 aaKnown RBP16.29■□□□□ 0.2
NEDD1-213ENST00000557644 RAD23BP54727 409 aa16.29■□□□□ 0.2
NEDD1-213ENST00000557644 CREMQ03060 361 aa16.29■□□□□ 0.2
NEDD1-213ENST00000557644 DRAP1Q14919 205 aaPredicted RBP16.29■□□□□ 0.2
NEDD1-213ENST00000557644 ENOSF1Q7L5Y1 443 aa16.29■□□□□ 0.2
NEDD1-213ENST00000557644 UNC93AQ86WB7 457 aa16.29■□□□□ 0.2
NEDD1-213ENST00000557644 B3GALNT2Q8NCR0 500 aa16.29■□□□□ 0.2
NEDD1-213ENST00000557644 SHC3Q92529 594 aa16.29■□□□□ 0.2
NEDD1-213ENST00000557644 NT5C1AQ9BXI3 368 aa16.29■□□□□ 0.2
NEDD1-213ENST00000557644 IGFLR1Q9H665 355 aa16.29■□□□□ 0.2
NEDD1-213ENST00000557644 ACP6Q9NPH0 428 aa16.29■□□□□ 0.2
NEDD1-213ENST00000557644 TGM5O43548 720 aa16.28■□□□□ 0.2
NEDD1-213ENST00000557644 VNN2O95498 520 aa16.28■□□□□ 0.2
NEDD1-213ENST00000557644 PTPN1P18031 435 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms