RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 SIX2Q9NPC8 291 aa17.56■□□□□ 0.4
PCNX4-213ENST00000556907 CEP72Q9P209 647 aa17.56■□□□□ 0.4
PCNX4-213ENST00000556907 COG5Q9UP83 839 aa17.56■□□□□ 0.4
PCNX4-213ENST00000556907 PCDHGC5Q9Y5F6 944 aa17.56■□□□□ 0.4
PCNX4-213ENST00000556907 GABRDO14764 452 aa17.55■□□□□ 0.4
PCNX4-213ENST00000556907 CSPG5O95196 566 aa17.55■□□□□ 0.4
PCNX4-213ENST00000556907 GLUD1P00367 558 aa17.55■□□□□ 0.4
PCNX4-213ENST00000556907 PCSK1P29120 753 aa17.55■□□□□ 0.4
PCNX4-213ENST00000556907 CLCN4P51793 760 aa17.55■□□□□ 0.4
PCNX4-213ENST00000556907 ADAM15Q13444 863 aa17.55■□□□□ 0.4
PCNX4-213ENST00000556907 KCNC3Q14003 757 aa17.55■□□□□ 0.4
PCNX4-213ENST00000556907 ARID5BQ14865 1188 aa17.55■□□□□ 0.4
PCNX4-213ENST00000556907 SOWAHAQ2M3V2 549 aa17.55■□□□□ 0.4
PCNX4-213ENST00000556907 CTC1Q2NKJ3 1217 aa17.55■□□□□ 0.4
PCNX4-213ENST00000556907 WSCD1Q658N2 575 aa17.55■□□□□ 0.4
PCNX4-213ENST00000556907 TPGS2Q68CL5 300 aa17.55■□□□□ 0.4
PCNX4-213ENST00000556907 SMYD5Q6GMV2 418 aa17.55■□□□□ 0.4
PCNX4-213ENST00000556907 RBM23Q86U06 439 aaKnown RBP17.55■□□□□ 0.4
PCNX4-213ENST00000556907 PDCL2Q8N4E4 241 aa17.55■□□□□ 0.4
PCNX4-213ENST00000556907 TTC39CQ8N584 583 aa17.55■□□□□ 0.4
PCNX4-213ENST00000556907 TC2NQ8N9U0 490 aa17.55■□□□□ 0.4
PCNX4-213ENST00000556907 SLC22A17Q8WUG5 538 aa17.55■□□□□ 0.4
PCNX4-213ENST00000556907 MMS19Q96T76 1030 aa17.55■□□□□ 0.4
PCNX4-213ENST00000556907 ACBD6Q9BR61 282 aa17.55■□□□□ 0.4
PCNX4-213ENST00000556907 DNAI2Q9GZS0 605 aa17.55■□□□□ 0.4
PCNX4-213ENST00000556907 PLEKHA4Q9H4M7 779 aa17.55■□□□□ 0.4
PCNX4-213ENST00000556907 CYP3A43Q9HB55 503 aa17.55■□□□□ 0.4
PCNX4-213ENST00000556907 FAM207AQ9NSI2 230 aaPredicted RBP17.55■□□□□ 0.4
PCNX4-213ENST00000556907 CAPN11Q9UMQ6 739 aa17.55■□□□□ 0.4
PCNX4-213ENST00000556907 L1RE1Q9UN81 338 aa17.55■□□□□ 0.4
PCNX4-213ENST00000556907 CDY1Q9Y6F8 540 aa17.55■□□□□ 0.4
PCNX4-213ENST00000556907 AKR1B15C9JRZ8 316 aaPredicted RBP17.54■□□□□ 0.4
PCNX4-213ENST00000556907 PER2O15055 1255 aa17.54■□□□□ 0.4
PCNX4-213ENST00000556907 EPHB6O15197 1021 aa17.54■□□□□ 0.4
PCNX4-213ENST00000556907 NOL4O94818 638 aa17.54■□□□□ 0.4
PCNX4-213ENST00000556907 SLC9A1P19634 815 aa17.54■□□□□ 0.4
PCNX4-213ENST00000556907 WARSP23381 471 aaKnown RBP17.54■□□□□ 0.4
PCNX4-213ENST00000556907 OR1D2P34982 312 aa17.54■□□□□ 0.4
PCNX4-213ENST00000556907 NOP14P78316 857 aaKnown RBP17.54■□□□□ 0.4
PCNX4-213ENST00000556907 HS1BP3Q53T59 392 aa17.54■□□□□ 0.4
PCNX4-213ENST00000556907 SCARA3Q6AZY7 606 aa17.54■□□□□ 0.4
PCNX4-213ENST00000556907 LILRA6Q6PI73 481 aa17.54■□□□□ 0.4
PCNX4-213ENST00000556907 ADGRF2Q8IZF7 708 aa17.54■□□□□ 0.4
PCNX4-213ENST00000556907 ZNF461Q8TAF7 563 aa17.54■□□□□ 0.4
PCNX4-213ENST00000556907 FAM81BQ96LP2 452 aa17.54■□□□□ 0.4
PCNX4-213ENST00000556907 DZANK1Q9NVP4 752 aa17.54■□□□□ 0.4
PCNX4-213ENST00000556907 NXF1Q9UBU9 619 aaKnown RBP17.54■□□□□ 0.4
PCNX4-213ENST00000556907 TIMM13Q9Y5L4 95 aaPredicted RBP17.54■□□□□ 0.4
PCNX4-213ENST00000556907 HCFC2Q9Y5Z7 792 aa17.54■□□□□ 0.4
PCNX4-213ENST00000556907 CLSTN1O94985 981 aa17.53■□□□□ 0.4
PCNX4-213ENST00000556907 HOXB8P17481 243 aaPredicted RBP17.53■□□□□ 0.4
PCNX4-213ENST00000556907 CASP14P31944 242 aa17.53■□□□□ 0.4
PCNX4-213ENST00000556907 GPR17Q13304 367 aa17.53■□□□□ 0.4
PCNX4-213ENST00000556907 CCDC85BQ15834 202 aaPredicted RBP17.53■□□□□ 0.4
PCNX4-213ENST00000556907 KLHDC7AQ5VTJ3 777 aa17.53■□□□□ 0.4
PCNX4-213ENST00000556907 DCP1BQ8IZD4 617 aaKnown RBP17.53■□□□□ 0.4
PCNX4-213ENST00000556907 EHBP1Q8NDI1 1231 aa17.53■□□□□ 0.4
PCNX4-213ENST00000556907 C2orf15Q8WU43 125 aaKnown RBP17.53■□□□□ 0.4
PCNX4-213ENST00000556907 BAP1Q92560 729 aa17.53■□□□□ 0.4
PCNX4-213ENST00000556907 NIF3L1Q9GZT8 377 aa17.53■□□□□ 0.4
PCNX4-213ENST00000556907 SNX25Q9H3E2 840 aa17.53■□□□□ 0.4
PCNX4-213ENST00000556907 IGFLR1Q9H665 355 aa17.53■□□□□ 0.4
PCNX4-213ENST00000556907 DDX43Q9NXZ2 648 aaKnown RBP17.53■□□□□ 0.4
PCNX4-213ENST00000556907 HSFX1Q9UBD0 423 aa17.53■□□□□ 0.4
PCNX4-213ENST00000556907 APEX2Q9UBZ4 518 aa17.53■□□□□ 0.4
PCNX4-213ENST00000556907 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.52■□□□□ 0.4
PCNX4-213ENST00000556907 ABLIM3O94929 683 aa17.52■□□□□ 0.4
PCNX4-213ENST00000556907 UCHL3P15374 230 aa17.52■□□□□ 0.4
PCNX4-213ENST00000556907 RPL17P18621 184 aaKnown RBP17.52■□□□□ 0.4
PCNX4-213ENST00000556907 FECHP22830 423 aa17.52■□□□□ 0.4
PCNX4-213ENST00000556907 TBXAS1P24557 533 aaPredicted RBP17.52■□□□□ 0.4
PCNX4-213ENST00000556907 GNL1P36915 607 aaPredicted RBP17.52■□□□□ 0.4
PCNX4-213ENST00000556907 ZBED6P86452 979 aa17.52■□□□□ 0.4
PCNX4-213ENST00000556907 TSPY1Q01534 308 aa17.52■□□□□ 0.4
PCNX4-213ENST00000556907 SKIV2LQ15477 1246 aaKnown RBP17.52■□□□□ 0.4
PCNX4-213ENST00000556907 MAPRE1Q15691 268 aaKnown RBP17.52■□□□□ 0.4
PCNX4-213ENST00000556907 UNC93AQ86WB7 457 aa17.52■□□□□ 0.4
PCNX4-213ENST00000556907 SEMA4DQ92854 862 aa17.52■□□□□ 0.4
PCNX4-213ENST00000556907 HLA-CQ95604 372 aa17.52■□□□□ 0.4
PCNX4-213ENST00000556907 PANX2Q96RD6 677 aa17.52■□□□□ 0.4
PCNX4-213ENST00000556907 DNAJC7Q99615 494 aa17.52■□□□□ 0.4
PCNX4-213ENST00000556907 BCO2Q9BYV7 579 aa17.52■□□□□ 0.4
PCNX4-213ENST00000556907 ZCWPW1Q9H0M4 648 aa17.52■□□□□ 0.4
PCNX4-213ENST00000556907 CLDND1Q9NY35 253 aa17.52■□□□□ 0.4
PCNX4-213ENST00000556907 AFF4Q9UHB7 1163 aaKnown RBP17.52■□□□□ 0.4
PCNX4-213ENST00000556907 CDH9Q9ULB4 789 aa17.52■□□□□ 0.4
PCNX4-213ENST00000556907 MYO6Q9UM54 1294 aa17.52■□□□□ 0.4
PCNX4-213ENST00000556907 LUC7L2Q9Y383 392 aaKnown RBP17.52■□□□□ 0.4
PCNX4-213ENST00000556907 FHOD1Q9Y613 1164 aa17.52■□□□□ 0.4
PCNX4-213ENST00000556907 MTCL1Q9Y4B5 1905 aaKnown RBP17.51■□□□□ 0.39
PCNX4-213ENST00000556907 TGM5O43548 720 aa17.51■□□□□ 0.39
PCNX4-213ENST00000556907 CPB1P15086 417 aa17.51■□□□□ 0.39
PCNX4-213ENST00000556907 ATF2P15336 505 aa17.51■□□□□ 0.39
PCNX4-213ENST00000556907 ELF1P32519 619 aa17.51■□□□□ 0.39
PCNX4-213ENST00000556907 YWHAEP62258 255 aaKnown RBP17.51■□□□□ 0.39
PCNX4-213ENST00000556907 ROR1Q01973 937 aa17.51■□□□□ 0.39
PCNX4-213ENST00000556907 NFE2Q16621 373 aaPredicted RBP17.51■□□□□ 0.39
PCNX4-213ENST00000556907 RSPO2Q6UXX9 243 aaPredicted RBP17.51■□□□□ 0.39
PCNX4-213ENST00000556907 CYP26C1Q6V0L0 522 aa17.51■□□□□ 0.39
PCNX4-213ENST00000556907 CCDC149Q6ZUS6 474 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms