RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 EIF3DO15371 548 aaKnown RBP eCLIP7.89□□□□□ -1.15
SCFD1-222ENST00000556768 FGF19O95750 216 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 PDGFBP01127 241 aaPredicted RBP7.89□□□□□ -1.15
SCFD1-222ENST00000556768 KRT19P08727 400 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 GUCY2FP51841 1108 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 RBP5P82980 135 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 TSPY1Q01534 308 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 NHLH1Q02575 133 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 DNM1Q05193 864 aaKnown RBP7.89□□□□□ -1.15
SCFD1-222ENST00000556768 DUSP4Q13115 394 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 HTR4Q13639 388 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 DUOXA2Q1HG44 320 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 MAP7D1Q3KQU3 841 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 FAM26FQ5R3K3 315 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 PARM1Q6UWI2 310 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 ITIH5Q86UX2 942 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 BRSK2Q8IWQ3 736 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 DCP1BQ8IZD4 617 aaKnown RBP7.89□□□□□ -1.15
SCFD1-222ENST00000556768 ITFG1Q8TB96 612 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 C2orf15Q8WU43 125 aaKnown RBP7.89□□□□□ -1.15
SCFD1-222ENST00000556768 ATOH1Q92858 354 aaPredicted RBP7.89□□□□□ -1.15
SCFD1-222ENST00000556768 FGF14Q92915 247 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 CCDC47Q96A33 483 aaKnown RBP7.89□□□□□ -1.15
SCFD1-222ENST00000556768 SAAL1Q96ER3 474 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 MCRS1Q96EZ8 462 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 SPATA32Q96LK8 384 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 PGLYRP2Q96PD5 576 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 FNBP1Q96RU3 617 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 C7orf25Q9BPX7 421 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 SCAND2PQ9GZW5 306 aaPredicted RBP7.89□□□□□ -1.15
SCFD1-222ENST00000556768 SMOC2Q9H3U7 446 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 PCIF1Q9H4Z3 704 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 SLC2A4RGQ9NR83 387 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 CGNQ9P2M7 1197 aaKnown RBP7.89□□□□□ -1.15
SCFD1-222ENST00000556768 HSFX1Q9UBD0 423 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 RCOR1Q9UKL0 485 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 ITGA11Q9UKX5 1188 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 PVALEFA0A1B0GWK0 134 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 NARSO43776 548 aaKnown RBP7.89□□□□□ -1.15
SCFD1-222ENST00000556768 PRPF40AO75400 957 aaKnown RBP7.89□□□□□ -1.15
SCFD1-222ENST00000556768 KIF20AO95235 890 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 SEC24AO95486 1093 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 TNNC2P02585 160 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 CYP11A1P05108 521 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 MYL1P05976 194 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 SLFN14P0C7P3 912 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 MYL4P12829 197 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 AOC1P19801 751 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 AFMP43652 599 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 CASP5P51878 434 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 VCPP55072 806 aaKnown RBP7.89□□□□□ -1.15
SCFD1-222ENST00000556768 PTK2Q05397 1052 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 EML3Q32P44 896 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 DMRTA1Q5VZB9 504 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 RESP18Q5W5W9 173 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 CNNM4Q6P4Q7 775 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 CRELD2Q6UXH1 353 aaPredicted RBP7.89□□□□□ -1.15
SCFD1-222ENST00000556768 UNC13DQ70J99 1090 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 NPAS3Q8IXF0 933 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 LRRC52Q8N7C0 313 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 GOLGA5Q8TBA6 731 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 GPR152Q8TDT2 470 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 ING5Q8WYH8 240 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 E2F7Q96AV8 911 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 CBWD1Q9BRT8 395 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 ZFP14Q9HCL3 533 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 ARHGEF3Q9NR81 526 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 USP25Q9UHP3 1055 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 CA14Q9ULX7 337 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 AGAP1Q9UPQ3 857 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 VPS9D1Q9Y2B5 631 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 SIT1Q9Y3P8 196 aa7.89□□□□□ -1.15
SCFD1-222ENST00000556768 DMDP11532 3685 aa7.88□□□□□ -1.15
SCFD1-222ENST00000556768 GOLGA8IPA6NC78 632 aa7.88□□□□□ -1.15
SCFD1-222ENST00000556768 GOLGA8JA6NMD2 632 aa7.88□□□□□ -1.15
SCFD1-222ENST00000556768 NCAM2O15394 837 aa7.88□□□□□ -1.15
SCFD1-222ENST00000556768 ECI2O75521 394 aa7.88□□□□□ -1.15
SCFD1-222ENST00000556768 DKK1O94907 266 aa7.88□□□□□ -1.15
SCFD1-222ENST00000556768 ITGB3P05106 788 aa7.88□□□□□ -1.15
SCFD1-222ENST00000556768 TCF3P15923 654 aa7.88□□□□□ -1.15
SCFD1-222ENST00000556768 JUNDP17535 347 aa7.88□□□□□ -1.15
SCFD1-222ENST00000556768 TNNI1P19237 187 aa7.88□□□□□ -1.15
SCFD1-222ENST00000556768 CMA1P23946 247 aa7.88□□□□□ -1.15
SCFD1-222ENST00000556768 POLR2BP30876 1174 aaKnown RBP7.88□□□□□ -1.15
SCFD1-222ENST00000556768 GPC5P78333 572 aa7.88□□□□□ -1.15
SCFD1-222ENST00000556768 MYL7Q01449 175 aa7.88□□□□□ -1.15
SCFD1-222ENST00000556768 PSMD2Q13200 908 aa7.88□□□□□ -1.15
SCFD1-222ENST00000556768 NFE2Q16621 373 aaPredicted RBP7.88□□□□□ -1.15
SCFD1-222ENST00000556768 MGAT5BQ3V5L5 792 aa7.88□□□□□ -1.15
SCFD1-222ENST00000556768 SLC39A12Q504Y0 691 aa7.88□□□□□ -1.15
SCFD1-222ENST00000556768 ARHGAP15Q53QZ3 475 aa7.88□□□□□ -1.15
SCFD1-222ENST00000556768 CENPPQ6IPU0 288 aa7.88□□□□□ -1.15
SCFD1-222ENST00000556768 TMEM86AQ8N2M4 240 aa7.88□□□□□ -1.15
SCFD1-222ENST00000556768 ATAD1Q8NBU5 361 aa7.88□□□□□ -1.15
SCFD1-222ENST00000556768 ZNF507Q8TCN5 953 aa7.88□□□□□ -1.15
SCFD1-222ENST00000556768 SPPL2BQ8TCT7 592 aa7.88□□□□□ -1.15
SCFD1-222ENST00000556768 ELSPBP1Q96BH3 223 aa7.88□□□□□ -1.15
SCFD1-222ENST00000556768 GCNAQ96QF7 691 aa7.88□□□□□ -1.15
SCFD1-222ENST00000556768 SEPT5Q99719 369 aaPredicted RBP7.88□□□□□ -1.15
SCFD1-222ENST00000556768 EXOC1Q9NV70 894 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms