RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 PLXNA4Q9HCM2 1894 aa12.25□□□□□ -0.45
GABRB3-210ENST00000556166 MYO9BQ13459 2157 aa12.25□□□□□ -0.45
GABRB3-210ENST00000556166 MYBPHLA2RUH7 354 aa12.25□□□□□ -0.45
GABRB3-210ENST00000556166 H7C4K7 107 aa12.25□□□□□ -0.45
GABRB3-210ENST00000556166 FOXN3O00409 490 aaPredicted RBP12.25□□□□□ -0.45
GABRB3-210ENST00000556166 CLASP2O75122 1294 aaKnown RBP12.25□□□□□ -0.45
GABRB3-210ENST00000556166 PNMA6AP0CW24 399 aaPredicted RBP12.25□□□□□ -0.45
GABRB3-210ENST00000556166 POU3F3P20264 500 aaPredicted RBP12.25□□□□□ -0.45
GABRB3-210ENST00000556166 GTF2F1P35269 517 aaKnown RBP eCLIP12.25□□□□□ -0.45
GABRB3-210ENST00000556166 LHX1P48742 406 aa12.25□□□□□ -0.45
GABRB3-210ENST00000556166 RAD23BP54727 409 aa12.25□□□□□ -0.45
GABRB3-210ENST00000556166 SLC8B1Q6J4K2 584 aa12.25□□□□□ -0.45
GABRB3-210ENST00000556166 PDE12Q6L8Q7 609 aaKnown RBP12.25□□□□□ -0.45
GABRB3-210ENST00000556166 NLRC5Q86WI3 1866 aa12.25□□□□□ -0.45
GABRB3-210ENST00000556166 GLYCTKQ8IVS8 523 aa12.25□□□□□ -0.45
GABRB3-210ENST00000556166 DEFB123Q8N688 67 aa12.25□□□□□ -0.45
GABRB3-210ENST00000556166 SPATA18Q8TC71 538 aa12.25□□□□□ -0.45
GABRB3-210ENST00000556166 CDX2Q99626 313 aaPredicted RBP12.25□□□□□ -0.45
GABRB3-210ENST00000556166 ACBD6Q9BR61 282 aa12.25□□□□□ -0.45
GABRB3-210ENST00000556166 ZCWPW1Q9H0M4 648 aa12.25□□□□□ -0.45
GABRB3-210ENST00000556166 CRTAC1Q9NQ79 661 aa12.25□□□□□ -0.45
GABRB3-210ENST00000556166 MTMR10Q9NXD2 777 aa12.25□□□□□ -0.45
GABRB3-210ENST00000556166 BARX2Q9UMQ3 279 aaPredicted RBP12.25□□□□□ -0.45
GABRB3-210ENST00000556166 CNTN6Q9UQ52 1028 aa12.25□□□□□ -0.45
GABRB3-210ENST00000556166 CDY1Q9Y6F8 540 aa12.25□□□□□ -0.45
GABRB3-210ENST00000556166 VWA8A3KMH1 1905 aa12.25□□□□□ -0.45
GABRB3-210ENST00000556166 ARHGEF37A1IGU5 675 aa12.24□□□□□ -0.45
GABRB3-210ENST00000556166 OR6C75A6NL08 312 aa12.24□□□□□ -0.45
GABRB3-210ENST00000556166 A8MXQ7 604 aa12.24□□□□□ -0.45
GABRB3-210ENST00000556166 PTPN1P18031 435 aaKnown RBP12.24□□□□□ -0.45
GABRB3-210ENST00000556166 TBXAS1P24557 533 aaPredicted RBP12.24□□□□□ -0.45
GABRB3-210ENST00000556166 ZNF75DP51815 510 aa12.24□□□□□ -0.45
GABRB3-210ENST00000556166 MFAP3P55082 362 aa12.24□□□□□ -0.45
GABRB3-210ENST00000556166 ARPP19P56211 112 aa12.24□□□□□ -0.45
GABRB3-210ENST00000556166 POLR2FP61218 127 aaKnown RBP12.24□□□□□ -0.45
GABRB3-210ENST00000556166 PSMC1P62191 440 aaKnown RBP12.24□□□□□ -0.45
GABRB3-210ENST00000556166 RBM10P98175 930 aaKnown RBP12.24□□□□□ -0.45
GABRB3-210ENST00000556166 PTPROQ16827 1216 aa12.24□□□□□ -0.45
GABRB3-210ENST00000556166 ARHGAP44Q17R89 818 aa12.24□□□□□ -0.45
GABRB3-210ENST00000556166 ZNF394Q53GI3 561 aa12.24□□□□□ -0.45
GABRB3-210ENST00000556166 ZNF280DQ6N043 979 aa12.24□□□□□ -0.45
GABRB3-210ENST00000556166 FAM171BQ6P995 826 aa12.24□□□□□ -0.45
GABRB3-210ENST00000556166 LILRA6Q6PI73 481 aa12.24□□□□□ -0.45
GABRB3-210ENST00000556166 ACOT1Q86TX2 421 aa12.24□□□□□ -0.45
GABRB3-210ENST00000556166 RBM23Q86U06 439 aaKnown RBP12.24□□□□□ -0.45
GABRB3-210ENST00000556166 PALB2Q86YC2 1186 aa12.24□□□□□ -0.45
GABRB3-210ENST00000556166 CRYBG2Q8N1P7 616 aa12.24□□□□□ -0.45
GABRB3-210ENST00000556166 THEM5Q8N1Q8 247 aa12.24□□□□□ -0.45
GABRB3-210ENST00000556166 SLC4A11Q8NBS3 891 aa12.24□□□□□ -0.45
GABRB3-210ENST00000556166 SLC22A17Q8WUG5 538 aa12.24□□□□□ -0.45
GABRB3-210ENST00000556166 MYLIPQ8WY64 445 aa12.24□□□□□ -0.45
GABRB3-210ENST00000556166 SHC3Q92529 594 aa12.24□□□□□ -0.45
GABRB3-210ENST00000556166 PCMTD1Q96MG8 357 aaPredicted RBP12.24□□□□□ -0.45
GABRB3-210ENST00000556166 ZSWIM1Q9BR11 485 aa12.24□□□□□ -0.45
GABRB3-210ENST00000556166 TRIM5Q9C035 493 aa12.24□□□□□ -0.45
GABRB3-210ENST00000556166 GTF3C4Q9UKN8 822 aa12.24□□□□□ -0.45
GABRB3-210ENST00000556166 ABLIM3O94929 683 aa12.23□□□□□ -0.45
GABRB3-210ENST00000556166 SPATA31D3P0C874 917 aa12.23□□□□□ -0.45
GABRB3-210ENST00000556166 IGFBP4P22692 258 aa12.23□□□□□ -0.45
GABRB3-210ENST00000556166 CA8P35219 290 aa12.23□□□□□ -0.45
GABRB3-210ENST00000556166 ZNF132P52740 706 aa12.23□□□□□ -0.45
GABRB3-210ENST00000556166 JAM2P57087 298 aa12.23□□□□□ -0.45
GABRB3-210ENST00000556166 RAB33AQ14088 237 aa12.23□□□□□ -0.45
GABRB3-210ENST00000556166 DRAP1Q14919 205 aaPredicted RBP12.23□□□□□ -0.45
GABRB3-210ENST00000556166 TCEAL5Q5H9L2 206 aa12.23□□□□□ -0.45
GABRB3-210ENST00000556166 INTS6LQ5JSJ4 861 aaKnown RBP12.23□□□□□ -0.45
GABRB3-210ENST00000556166 PDXDC1Q6P996 788 aa12.23□□□□□ -0.45
GABRB3-210ENST00000556166 RNF19BQ6ZMZ0 732 aa12.23□□□□□ -0.45
GABRB3-210ENST00000556166 SPATA31D4Q6ZUB0 917 aa12.23□□□□□ -0.45
GABRB3-210ENST00000556166 ENOSF1Q7L5Y1 443 aa12.23□□□□□ -0.45
GABRB3-210ENST00000556166 UNC93AQ86WB7 457 aa12.23□□□□□ -0.45
GABRB3-210ENST00000556166 C12orf29Q8N999 325 aa12.23□□□□□ -0.45
GABRB3-210ENST00000556166 VN1R2Q8NFZ6 395 aa12.23□□□□□ -0.45
GABRB3-210ENST00000556166 NEK11Q8NG66 645 aa12.23□□□□□ -0.45
GABRB3-210ENST00000556166 BAP1Q92560 729 aa12.23□□□□□ -0.45
GABRB3-210ENST00000556166 JAKMIP2Q96AA8 810 aa12.23□□□□□ -0.45
GABRB3-210ENST00000556166 SYT15Q9BQS2 421 aa12.23□□□□□ -0.45
GABRB3-210ENST00000556166 STK33Q9BYT3 514 aa12.23□□□□□ -0.45
GABRB3-210ENST00000556166 TTYH3Q9C0H2 523 aa12.23□□□□□ -0.45
GABRB3-210ENST00000556166 CRISPLD1Q9H336 500 aa12.23□□□□□ -0.45
GABRB3-210ENST00000556166 ACP6Q9NPH0 428 aa12.23□□□□□ -0.45
GABRB3-210ENST00000556166 NLRC4Q9NPP4 1024 aa12.23□□□□□ -0.45
GABRB3-210ENST00000556166 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.23□□□□□ -0.45
GABRB3-210ENST00000556166 LMCD1Q9NZU5 365 aa12.23□□□□□ -0.45
GABRB3-210ENST00000556166 CDH9Q9ULB4 789 aa12.23□□□□□ -0.45
GABRB3-210ENST00000556166 SSX2IPQ9Y2D8 614 aa12.23□□□□□ -0.45
GABRB3-210ENST00000556166 PCDHB4Q9Y5E5 795 aa12.23□□□□□ -0.45
GABRB3-210ENST00000556166 WDR27A2RRH5 827 aa12.22□□□□□ -0.45
GABRB3-210ENST00000556166 CBFA2T2O43439 604 aa12.22□□□□□ -0.45
GABRB3-210ENST00000556166 TGM5O43548 720 aa12.22□□□□□ -0.45
GABRB3-210ENST00000556166 KLRC2P26717 231 aa12.22□□□□□ -0.45
GABRB3-210ENST00000556166 PCSK1P29120 753 aa12.22□□□□□ -0.45
GABRB3-210ENST00000556166 CLCN1P35523 988 aa12.22□□□□□ -0.45
GABRB3-210ENST00000556166 NRIP1P48552 1158 aa12.22□□□□□ -0.45
GABRB3-210ENST00000556166 NDUFV1P49821 464 aa12.22□□□□□ -0.45
GABRB3-210ENST00000556166 ROR1Q01973 937 aa12.22□□□□□ -0.45
GABRB3-210ENST00000556166 HYAL1Q12794 435 aa12.22□□□□□ -0.45
GABRB3-210ENST00000556166 GPR17Q13304 367 aa12.22□□□□□ -0.45
GABRB3-210ENST00000556166 RAPGEF1Q13905 1077 aa12.22□□□□□ -0.45
GABRB3-210ENST00000556166 KCNC3Q14003 757 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms