RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 TDRD15B5MCY1 1934 aaKnown RBP10.87□□□□□ -0.67
SRP54-208ENST00000555557 TADA2AO75478 443 aa10.86□□□□□ -0.67
SRP54-208ENST00000555557 GALTP07902 379 aa10.86□□□□□ -0.67
SRP54-208ENST00000555557 PAEPP09466 180 aa10.86□□□□□ -0.67
SRP54-208ENST00000555557 BCAR1P56945 870 aa10.86□□□□□ -0.67
SRP54-208ENST00000555557 CCDC142Q17RM4 750 aa10.86□□□□□ -0.67
SRP54-208ENST00000555557 TMEM173Q86WV6 379 aaPredicted RBP10.86□□□□□ -0.67
SRP54-208ENST00000555557 LRRC43Q8N309 656 aa10.86□□□□□ -0.67
SRP54-208ENST00000555557 CPA5Q8WXQ8 436 aa10.86□□□□□ -0.67
SRP54-208ENST00000555557 RSPH1Q8WYR4 309 aa10.86□□□□□ -0.67
SRP54-208ENST00000555557 MRPL9Q9BYD2 267 aaKnown RBP10.86□□□□□ -0.67
SRP54-208ENST00000555557 KCND1Q9NSA2 647 aa10.86□□□□□ -0.67
SRP54-208ENST00000555557 FAM49BQ9NUQ9 324 aa10.86□□□□□ -0.67
SRP54-208ENST00000555557 RNF216Q9NWF9 866 aaPredicted RBP10.86□□□□□ -0.67
SRP54-208ENST00000555557 STXBP5LQ9Y2K9 1186 aa10.86□□□□□ -0.67
SRP54-208ENST00000555557 FAN1Q9Y2M0 1017 aa10.86□□□□□ -0.67
SRP54-208ENST00000555557 EFCAB14O75071 495 aa10.86□□□□□ -0.67
SRP54-208ENST00000555557 ATP2C2O75185 946 aa10.86□□□□□ -0.67
SRP54-208ENST00000555557 BAIAP3O94812 1187 aa10.86□□□□□ -0.67
SRP54-208ENST00000555557 FTLP02792 175 aaPredicted RBP10.86□□□□□ -0.67
SRP54-208ENST00000555557 ABCB4P21439 1286 aa10.86□□□□□ -0.67
SRP54-208ENST00000555557 WARSP23381 471 aaKnown RBP10.86□□□□□ -0.67
SRP54-208ENST00000555557 ANXA13P27216 316 aa10.86□□□□□ -0.67
SRP54-208ENST00000555557 ARHGAP25P42331 645 aa10.86□□□□□ -0.67
SRP54-208ENST00000555557 VAV2P52735 878 aa10.86□□□□□ -0.67
SRP54-208ENST00000555557 PSMC1P62191 440 aaKnown RBP10.86□□□□□ -0.67
SRP54-208ENST00000555557 C2CD6Q53TS8 623 aa10.86□□□□□ -0.67
SRP54-208ENST00000555557 KIAA0319Q5VV43 1072 aa10.86□□□□□ -0.67
SRP54-208ENST00000555557 NAA35Q5VZE5 725 aa10.86□□□□□ -0.67
SRP54-208ENST00000555557 ZNF677Q86XU0 584 aa10.86□□□□□ -0.67
SRP54-208ENST00000555557 ZNF689Q96CS4 500 aaPredicted RBP10.86□□□□□ -0.67
SRP54-208ENST00000555557 CWH43Q9H720 699 aa10.86□□□□□ -0.67
SRP54-208ENST00000555557 DDX43Q9NXZ2 648 aaKnown RBP10.86□□□□□ -0.67
SRP54-208ENST00000555557 GUCA1BQ9UMX6 200 aa10.86□□□□□ -0.67
SRP54-208ENST00000555557 M0QZQ0 153 aa10.85□□□□□ -0.67
SRP54-208ENST00000555557 GABRDO14764 452 aa10.85□□□□□ -0.67
SRP54-208ENST00000555557 ZNF500O60304 480 aaPredicted RBP10.85□□□□□ -0.67
SRP54-208ENST00000555557 ODC1P11926 461 aa10.85□□□□□ -0.67
SRP54-208ENST00000555557 UNGP13051 313 aaPredicted RBP10.85□□□□□ -0.67
SRP54-208ENST00000555557 GALCP54803 685 aa10.85□□□□□ -0.67
SRP54-208ENST00000555557 CLEC16AQ2KHT3 1053 aa10.85□□□□□ -0.67
SRP54-208ENST00000555557 PPP1R26Q5T8A7 1209 aaPredicted RBP10.85□□□□□ -0.67
SRP54-208ENST00000555557 DENND1BQ6P3S1 775 aa10.85□□□□□ -0.67
SRP54-208ENST00000555557 UNC93AQ86WB7 457 aa10.85□□□□□ -0.67
SRP54-208ENST00000555557 TTC39CQ8N584 583 aa10.85□□□□□ -0.67
SRP54-208ENST00000555557 BCL7CQ8WUZ0 217 aaPredicted RBP10.85□□□□□ -0.67
SRP54-208ENST00000555557 SUSD3Q96L08 255 aa10.85□□□□□ -0.67
SRP54-208ENST00000555557 B3GALT6Q96L58 329 aa10.85□□□□□ -0.67
SRP54-208ENST00000555557 C16orf45Q96MC5 204 aaPredicted RBP10.85□□□□□ -0.67
SRP54-208ENST00000555557 GPR62Q9BZJ7 368 aa10.85□□□□□ -0.67
SRP54-208ENST00000555557 MARCH5Q9NX47 278 aa10.85□□□□□ -0.67
SRP54-208ENST00000555557 CHORDC1Q9UHD1 332 aaPredicted RBP10.85□□□□□ -0.67
SRP54-208ENST00000555557 SALL4Q9UJQ4 1053 aa10.85□□□□□ -0.67
SRP54-208ENST00000555557 PAXBP1Q9Y5B6 917 aa10.85□□□□□ -0.67
SRP54-208ENST00000555557 MACROD2A1Z1Q3 448 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 TMEM189-UBE2V1I3L0A0 370 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 CYP1A1P04798 512 aaPredicted RBP10.84□□□□□ -0.67
SRP54-208ENST00000555557 VDRP11473 427 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 CCDC130P13994 396 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 ALDH7A1P49419 539 aaKnown RBP10.84□□□□□ -0.67
SRP54-208ENST00000555557 KIF5AQ12840 1032 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 BTG3Q14201 252 aaPredicted RBP10.84□□□□□ -0.67
SRP54-208ENST00000555557 ARHGAP29Q52LW3 1261 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 SGO2Q562F6 1265 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 SPOUT1Q5T280 376 aaKnown RBP10.84□□□□□ -0.67
SRP54-208ENST00000555557 PHLDB2Q86SQ0 1253 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 TMEM86AQ8N2M4 240 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 WDTC1Q8N5D0 677 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 UBA3Q8TBC4 463 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 YME1L1Q96TA2 773 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 RTP3Q9BQQ7 232 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 COLEC11Q9BWP8 271 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 THAP2Q9H0W7 228 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 ISCUQ9H1K1 167 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 FAM124BQ9H5Z6 455 aaPredicted RBP10.84□□□□□ -0.67
SRP54-208ENST00000555557 RC3H2Q9HBD1 1191 aaKnown RBP10.84□□□□□ -0.67
SRP54-208ENST00000555557 ADAM28Q9UKQ2 775 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 O00370 1275 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 CCP110O43303 1012 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 RTN2O75298 545 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 MICAL2O94851 1124 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 H2AFZP0C0S5 128 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 GZMAP12544 262 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 TKTP29401 623 aaKnown RBP10.84□□□□□ -0.67
SRP54-208ENST00000555557 LHX1P48742 406 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 NOMO3P69849 1222 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 CNGA2Q16280 664 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 ACAD10Q6JQN1 1059 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 PSRC1Q6PGN9 363 aaPredicted RBP10.84□□□□□ -0.67
SRP54-208ENST00000555557 H2AFVQ71UI9 128 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 TAS1R1Q7RTX1 841 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 CEP57Q86XR8 500 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 CRYBG2Q8N1P7 616 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 B3GALNT2Q8NCR0 500 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 C1orf131Q8NDD1 294 aaKnown RBP10.84□□□□□ -0.67
SRP54-208ENST00000555557 TMEM209Q96SK2 561 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 LBHD1Q9BQE6 289 aaPredicted RBP10.84□□□□□ -0.67
SRP54-208ENST00000555557 TMEM175Q9BSA9 504 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 CYTH4Q9UIA0 394 aa10.84□□□□□ -0.67
SRP54-208ENST00000555557 TSPAN16Q9UKR8 245 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms