RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 SIX2Q9NPC8 291 aa15.25■□□□□ 0.03
CHD8-208ENST00000555301 NLRC5Q86WI3 1866 aa15.25■□□□□ 0.03
CHD8-208ENST00000555301 PDGFRBP09619 1106 aa15.24■□□□□ 0.03
CHD8-208ENST00000555301 CPB1P15086 417 aa15.24■□□□□ 0.03
CHD8-208ENST00000555301 UCHL3P15374 230 aa15.24■□□□□ 0.03
CHD8-208ENST00000555301 FOSL2P15408 326 aa15.24■□□□□ 0.03
CHD8-208ENST00000555301 LMO2P25791 158 aa15.24■□□□□ 0.03
CHD8-208ENST00000555301 NDST1P52848 882 aa15.24■□□□□ 0.03
CHD8-208ENST00000555301 ROR1Q01973 937 aa15.24■□□□□ 0.03
CHD8-208ENST00000555301 GPR17Q13304 367 aa15.24■□□□□ 0.03
CHD8-208ENST00000555301 MAPRE1Q15691 268 aaKnown RBP15.24■□□□□ 0.03
CHD8-208ENST00000555301 INTS6LQ5JSJ4 861 aaKnown RBP15.24■□□□□ 0.03
CHD8-208ENST00000555301 DPY19L2P1Q6NXN4 242 aa15.24■□□□□ 0.03
CHD8-208ENST00000555301 RSPO2Q6UXX9 243 aaPredicted RBP15.24■□□□□ 0.03
CHD8-208ENST00000555301 ADGRD2Q7Z7M1 963 aa15.24■□□□□ 0.03
CHD8-208ENST00000555301 MYLIPQ8WY64 445 aa15.24■□□□□ 0.03
CHD8-208ENST00000555301 GUCD1Q96NT3 240 aa15.24■□□□□ 0.03
CHD8-208ENST00000555301 SYT15Q9BQS2 421 aa15.24■□□□□ 0.03
CHD8-208ENST00000555301 NT5C1AQ9BXI3 368 aa15.24■□□□□ 0.03
CHD8-208ENST00000555301 XPO4Q9C0E2 1151 aaKnown RBP15.24■□□□□ 0.03
CHD8-208ENST00000555301 FAM207AQ9NSI2 230 aaPredicted RBP15.24■□□□□ 0.03
CHD8-208ENST00000555301 DPP7Q9UHL4 492 aa15.24■□□□□ 0.03
CHD8-208ENST00000555301 DNAJC12Q9UKB3 198 aa15.24■□□□□ 0.03
CHD8-208ENST00000555301 CDH23Q9H251 3354 aa15.23■□□□□ 0.03
CHD8-208ENST00000555301 PER2O15055 1255 aa15.23■□□□□ 0.03
CHD8-208ENST00000555301 ADAM12O43184 909 aa15.23■□□□□ 0.03
CHD8-208ENST00000555301 NCK2O43639 380 aa15.23■□□□□ 0.03
CHD8-208ENST00000555301 CLASP2O75122 1294 aaKnown RBP15.23■□□□□ 0.03
CHD8-208ENST00000555301 GLUD1P00367 558 aa15.23■□□□□ 0.03
CHD8-208ENST00000555301 ACAT1P24752 427 aaKnown RBP15.23■□□□□ 0.03
CHD8-208ENST00000555301 NRIP1P48552 1158 aa15.23■□□□□ 0.03
CHD8-208ENST00000555301 KLK7P49862 253 aa15.23■□□□□ 0.03
CHD8-208ENST00000555301 CLCN4P51793 760 aa15.23■□□□□ 0.03
CHD8-208ENST00000555301 ARPP19P56211 112 aa15.23■□□□□ 0.03
CHD8-208ENST00000555301 APBA1Q02410 837 aa15.23■□□□□ 0.03
CHD8-208ENST00000555301 NFE2Q16621 373 aaPredicted RBP15.23■□□□□ 0.03
CHD8-208ENST00000555301 DUSP6Q16828 381 aa15.23■□□□□ 0.03
CHD8-208ENST00000555301 TCEAL5Q5H9L2 206 aa15.23■□□□□ 0.03
CHD8-208ENST00000555301 TPGS2Q68CL5 300 aa15.23■□□□□ 0.03
CHD8-208ENST00000555301 GJB7Q6PEY0 223 aa15.23■□□□□ 0.03
CHD8-208ENST00000555301 ELMSAN1Q6PJG2 1045 aa15.23■□□□□ 0.03
CHD8-208ENST00000555301 RBM23Q86U06 439 aaKnown RBP15.23■□□□□ 0.03
CHD8-208ENST00000555301 GLYCTKQ8IVS8 523 aa15.23■□□□□ 0.03
CHD8-208ENST00000555301 CRYBG2Q8N1P7 616 aa15.23■□□□□ 0.03
CHD8-208ENST00000555301 UBR7Q8N806 425 aa15.23■□□□□ 0.03
CHD8-208ENST00000555301 ZNF461Q8TAF7 563 aa15.23■□□□□ 0.03
CHD8-208ENST00000555301 C2orf15Q8WU43 125 aaKnown RBP15.23■□□□□ 0.03
CHD8-208ENST00000555301 KAT5Q92993 513 aa15.23■□□□□ 0.03
CHD8-208ENST00000555301 KREMEN1Q96MU8 473 aa15.23■□□□□ 0.03
CHD8-208ENST00000555301 AFF4Q9UHB7 1163 aaKnown RBP15.23■□□□□ 0.03
CHD8-208ENST00000555301 MAFFQ9ULX9 164 aa15.23■□□□□ 0.03
CHD8-208ENST00000555301 PCDHB4Q9Y5E5 795 aa15.23■□□□□ 0.03
CHD8-208ENST00000555301 CHD7Q9P2D1 2997 aa15.22■□□□□ 0.03
CHD8-208ENST00000555301 WDR27A2RRH5 827 aa15.22■□□□□ 0.03
CHD8-208ENST00000555301 NOL4O94818 638 aa15.22■□□□□ 0.03
CHD8-208ENST00000555301 ABLIM3O94929 683 aa15.22■□□□□ 0.03
CHD8-208ENST00000555301 OR4Q2P0C623 313 aa15.22■□□□□ 0.03
CHD8-208ENST00000555301 SRGAP2BP0DMP2 458 aa15.22■□□□□ 0.03
CHD8-208ENST00000555301 PTPN1P18031 435 aaKnown RBP15.22■□□□□ 0.03
CHD8-208ENST00000555301 ACO1P21399 889 aaKnown RBP15.22■□□□□ 0.03
CHD8-208ENST00000555301 ARHGAP44Q17R89 818 aa15.22■□□□□ 0.03
CHD8-208ENST00000555301 SLC39A12Q504Y0 691 aa15.22■□□□□ 0.03
CHD8-208ENST00000555301 IQCEQ6IPM2 695 aa15.22■□□□□ 0.03
CHD8-208ENST00000555301 FAM171BQ6P995 826 aa15.22■□□□□ 0.03
CHD8-208ENST00000555301 C4orf50Q6ZRC1 276 aa15.22■□□□□ 0.03
CHD8-208ENST00000555301 PALB2Q86YC2 1186 aa15.22■□□□□ 0.03
CHD8-208ENST00000555301 B3GALNT2Q8NCR0 500 aa15.22■□□□□ 0.03
CHD8-208ENST00000555301 MYCBPAPQ8TBZ2 947 aa15.22■□□□□ 0.03
CHD8-208ENST00000555301 WHAMMQ8TF30 809 aa15.22■□□□□ 0.03
CHD8-208ENST00000555301 SHC3Q92529 594 aa15.22■□□□□ 0.03
CHD8-208ENST00000555301 IQCDQ96DY2 449 aa15.22■□□□□ 0.03
CHD8-208ENST00000555301 TMEM176AQ96HP8 235 aa15.22■□□□□ 0.03
CHD8-208ENST00000555301 TMEM209Q96SK2 561 aa15.22■□□□□ 0.03
CHD8-208ENST00000555301 NUP58Q9BVL2 599 aa15.22■□□□□ 0.03
CHD8-208ENST00000555301 NAA15Q9BXJ9 866 aaKnown RBP15.22■□□□□ 0.03
CHD8-208ENST00000555301 STK33Q9BYT3 514 aa15.22■□□□□ 0.03
CHD8-208ENST00000555301 TRIM5Q9C035 493 aa15.22■□□□□ 0.03
CHD8-208ENST00000555301 GANQ9H2C0 597 aa15.22■□□□□ 0.03
CHD8-208ENST00000555301 NME7Q9Y5B8 376 aa15.22■□□□□ 0.03
CHD8-208ENST00000555301 FHOD1Q9Y613 1164 aa15.22■□□□□ 0.03
CHD8-208ENST00000555301 PLXNA4Q9HCM2 1894 aa15.22■□□□□ 0.03
CHD8-208ENST00000555301 SCN1AP35498 2009 aa15.22■□□□□ 0.03
CHD8-208ENST00000555301 MYBPHLA2RUH7 354 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 TGM5O43548 720 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 HCRTO43612 131 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 ATF2P15336 505 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 ELF1P32519 619 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 PBX1P40424 430 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 POLR2FP61218 127 aaKnown RBP15.21■□□□□ 0.03
CHD8-208ENST00000555301 PSMC1P62191 440 aaKnown RBP15.21■□□□□ 0.03
CHD8-208ENST00000555301 HYAL1Q12794 435 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 RAPGEF1Q13905 1077 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 ZNF394Q53GI3 561 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 FIGNQ5HY92 759 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 LILRA6Q6PI73 481 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 TMEM270Q6UE05 265 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 CACNA2D4Q7Z3S7 1137 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 ACOT1Q86TX2 421 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 LRRTM3Q86VH5 581 aa15.21■□□□□ 0.03
CHD8-208ENST00000555301 MICALL1Q8N3F8 863 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms