RNA–Protein interactions for RNA: ENST00000552691.1

ERBB3-220, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 3

Gene ERBB3, Length 291 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-220ENST00000552691 FMNL3Q8IVF7 1028 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 LRRC8AQ8IWT6 810 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 ADGRF2Q8IZF7 708 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 CRYBG2Q8N1P7 616 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 TTC39CQ8N584 583 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 KLHL23Q8NBE8 558 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 SLC4A11Q8NBS3 891 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 RBBP8NLQ8NC74 664 aaPredicted RBP4.53□□□□□ -1.68
ERBB3-220ENST00000552691 SPATA18Q8TC71 538 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 WHAMMQ8TF30 809 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 SYN2Q92777 582 aaPredicted RBP4.53□□□□□ -1.68
ERBB3-220ENST00000552691 TMEM176AQ96HP8 235 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 PANX2Q96RD6 677 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 TWNKQ96RR1 684 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 TGS1Q96RS0 853 aaKnown RBP4.53□□□□□ -1.68
ERBB3-220ENST00000552691 DNAJC7Q99615 494 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 CHP1Q99653 195 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 RTP3Q9BQQ7 232 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 C17orf80Q9BSJ5 609 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 TTPALQ9BTX7 342 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 PLVAPQ9BX97 442 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 VN1R3Q9BXE9 311 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 NT5C1AQ9BXI3 368 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 PBX4Q9BYU1 374 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 ELOVL4Q9GZR5 314 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 NKX2-4Q9H2Z4 354 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 SNX25Q9H3E2 840 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 DPEP3Q9H4B8 488 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 HAUS4Q9H6D7 363 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 ACP6Q9NPH0 428 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 CHST7Q9NS84 486 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 ABHD10Q9NUJ1 306 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 DDX43Q9NXZ2 648 aaKnown RBP4.53□□□□□ -1.68
ERBB3-220ENST00000552691 HMGXB4Q9UGU5 601 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 MSRAQ9UJ68 235 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 STXBP5LQ9Y2K9 1186 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 RWDD3Q9Y3V2 267 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 DOCK4Q8N1I0 1966 aa4.53□□□□□ -1.68
ERBB3-220ENST00000552691 REV3LO60673 3130 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 SSU72P8A0A1W2PR75 194 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 H7C4K7 107 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 C2CD2LO14523 706 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 THAP12O43422 761 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 TBC1D4O60343 1298 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 LILRB3O75022 631 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 SOD2P04179 222 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 SERPING1P05155 500 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 RB1P06400 928 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 PTMAP06454 111 aaKnown RBP4.52□□□□□ -1.69
ERBB3-220ENST00000552691 MMEP08473 750 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 PLEKP08567 350 aaPredicted RBP4.52□□□□□ -1.69
ERBB3-220ENST00000552691 PAEPP09466 180 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 CTSAP10619 480 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 VDRP11473 427 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 SKILP12757 684 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 CYP11B1P15538 503 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 FERP16591 822 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 PTPN1P18031 435 aaKnown RBP4.52□□□□□ -1.69
ERBB3-220ENST00000552691 FECHP22830 423 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 ACAT1P24752 427 aaKnown RBP4.52□□□□□ -1.69
ERBB3-220ENST00000552691 BRD2P25440 801 aaKnown RBP4.52□□□□□ -1.69
ERBB3-220ENST00000552691 DNAJB1P25685 340 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 DNAJB2P25686 324 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 PCSK1P29120 753 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 GNA15P30679 374 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 BPIFB4P59827 614 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 ERVK-21P61565 698 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 PSMC1P62191 440 aaKnown RBP4.52□□□□□ -1.69
ERBB3-220ENST00000552691 SMAD3P84022 425 aaKnown RBP4.52□□□□□ -1.69
ERBB3-220ENST00000552691 CDK17Q00537 523 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 FMO1Q01740 532 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 DSG1Q02413 1049 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 KLHL30Q0D2K2 578 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 MAPK8IP2Q13387 824 aaPredicted RBP4.52□□□□□ -1.69
ERBB3-220ENST00000552691 ORC1Q13415 861 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 CNGA2Q16280 664 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 ASIC2Q16515 512 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 CTXN3Q4LDR2 81 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 TDRD12Q587J7 1177 aaKnown RBP4.52□□□□□ -1.69
ERBB3-220ENST00000552691 INTS6LQ5JSJ4 861 aaKnown RBP4.52□□□□□ -1.69
ERBB3-220ENST00000552691 RTP2Q5QGT7 225 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 PPP1R26Q5T8A7 1209 aaPredicted RBP4.52□□□□□ -1.69
ERBB3-220ENST00000552691 KIAA1841Q6NSI8 718 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 FAM171BQ6P995 826 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 PRSS55Q6UWB4 352 aaPredicted RBP4.52□□□□□ -1.69
ERBB3-220ENST00000552691 ANKS3Q6ZW76 656 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 ZNF571Q7Z3V5 609 aaPredicted RBP4.52□□□□□ -1.69
ERBB3-220ENST00000552691 ACOT1Q86TX2 421 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 NOP9Q86U38 636 aaKnown RBP4.52□□□□□ -1.69
ERBB3-220ENST00000552691 LRRTM3Q86VH5 581 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 TMEM139Q8IV31 216 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 GPR65Q8IYL9 337 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 VPS52Q8N1B4 723 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 THEM5Q8N1Q8 247 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 C12orf29Q8N999 325 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 B3GALNT2Q8NCR0 500 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 OR10T2Q8NGX3 314 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 LNX1Q8TBB1 728 aaPredicted RBP4.52□□□□□ -1.69
ERBB3-220ENST00000552691 SPPL3Q8TCT6 385 aa4.52□□□□□ -1.69
ERBB3-220ENST00000552691 EPS8L1Q8TE68 723 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms