RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 KMT5AQ9NQR1 393 aa11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 XPNPEP1Q9NQW7 623 aa11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 PCMTD2Q9NV79 361 aa11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 NMRK1Q9NWW6 199 aa11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 ZMYND8Q9ULU4 1186 aaPredicted RBP11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 TRIM33Q9UPN9 1127 aa11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 SLC45A1Q9Y2W3 748 aa11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 PCDHA3Q9Y5H8 950 aa11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 RPS6KL1Q9Y6S9 549 aa11.65□□□□□ -0.54
TUBA1C-209ENST00000552448 GOLGA8IPA6NC78 632 aa11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 GOLGA8JA6NMD2 632 aa11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 CDH16O75309 829 aa11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 PYGLP06737 847 aa11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 ITIH2P19823 946 aa11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 TAC1P20366 129 aa11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 ICAM3P32942 547 aa11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 SLCO1A2P46721 670 aa11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 RTP1P59025 263 aa11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 PRKCEQ02156 737 aa11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 AP1B1Q10567 949 aa11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 PRPF4BQ13523 1007 aaKnown RBP11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 SNRNP35Q16560 246 aaKnown RBP11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 PABPC1LQ4VXU2 614 aaKnown RBP11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 SLC45A4Q5BKX6 768 aa11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 SEL1L2Q5TEA6 688 aa11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 RNF220Q5VTB9 566 aa11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 DAB2IPQ5VWQ8 1189 aa11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 CBWD2Q8IUF1 395 aa11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 ARHGEF19Q8IW93 802 aa11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 C12orf50Q8NA57 414 aaPredicted RBP11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 MCPH1Q8NEM0 835 aa11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 SLC35G2Q8TBE7 412 aa11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 MGARPQ8TDB4 240 aa11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 VTI1AQ96AJ9 217 aa11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 ERP27Q96DN0 273 aa11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 MPHOSPH6Q99547 160 aaKnown RBP11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 TMEM117Q9H0C3 514 aa11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 PIDD1Q9HB75 910 aa11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 UBE2TQ9NPD8 197 aaPredicted RBP11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 CYP26B1Q9NR63 512 aa11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 DDX43Q9NXZ2 648 aaKnown RBP11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 NDUFA13Q9P0J0 144 aa11.65□□□□□ -0.55
TUBA1C-209ENST00000552448 MAP3K7O43318 606 aa11.64□□□□□ -0.55
TUBA1C-209ENST00000552448 CCDC22O60826 627 aa11.64□□□□□ -0.55
TUBA1C-209ENST00000552448 DGAT1O75907 488 aa11.64□□□□□ -0.55
TUBA1C-209ENST00000552448 SUPT20HL2P0C7V6 817 aa11.64□□□□□ -0.55
TUBA1C-209ENST00000552448 FGFR4P22455 802 aa11.64□□□□□ -0.55
TUBA1C-209ENST00000552448 GSTT1P30711 240 aa11.64□□□□□ -0.55
TUBA1C-209ENST00000552448 CNTN2Q02246 1040 aa11.64□□□□□ -0.55
TUBA1C-209ENST00000552448 SP4Q02446 784 aa11.64□□□□□ -0.55
TUBA1C-209ENST00000552448 MGAT5Q09328 741 aa11.64□□□□□ -0.55
TUBA1C-209ENST00000552448 FSTL1Q12841 308 aa11.64□□□□□ -0.55
TUBA1C-209ENST00000552448 RCN2Q14257 317 aa11.64□□□□□ -0.55
TUBA1C-209ENST00000552448 STXBP2Q15833 593 aa11.64□□□□□ -0.55
TUBA1C-209ENST00000552448 SNX30Q5VWJ9 437 aa11.64□□□□□ -0.55
TUBA1C-209ENST00000552448 SLC39A4Q6P5W5 647 aa11.64□□□□□ -0.55
TUBA1C-209ENST00000552448 MOB2Q70IA6 237 aa11.64□□□□□ -0.55
TUBA1C-209ENST00000552448 ARHGAP24Q8N264 748 aa11.64□□□□□ -0.55
TUBA1C-209ENST00000552448 GLG1Q92896 1179 aa11.64□□□□□ -0.55
TUBA1C-209ENST00000552448 FBXL18Q96ME1 805 aa11.64□□□□□ -0.55
TUBA1C-209ENST00000552448 HAPLN3Q96S86 360 aa11.64□□□□□ -0.55
TUBA1C-209ENST00000552448 NDNQ99608 321 aa11.64□□□□□ -0.55
TUBA1C-209ENST00000552448 GOLPH3Q9H4A6 298 aa11.64□□□□□ -0.55
TUBA1C-209ENST00000552448 SYNCQ9H7C4 482 aa11.64□□□□□ -0.55
TUBA1C-209ENST00000552448 SENP1Q9P0U3 644 aa11.64□□□□□ -0.55
TUBA1C-209ENST00000552448 SEPT9Q9UHD8 586 aaPredicted RBP11.64□□□□□ -0.55
TUBA1C-209ENST00000552448 IGSF9BQ9UPX0 1349 aa11.64□□□□□ -0.55
TUBA1C-209ENST00000552448 ANKRD62A6NC57 917 aa11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 FAM47DPA6NHR8 397 aa11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 A8MXQ7 604 aa11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 ZSCAN9O15535 394 aaPredicted RBP11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 SORBS3O60504 671 aa11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 PEX10O60683 326 aa11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 ATG7O95352 703 aa11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 TTC4O95801 387 aa11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 MXI1P50539 228 aa11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 MOGSQ13724 837 aa11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 MAP7Q14244 749 aa11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 STAT4Q14765 748 aa11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 XKR3Q5GH77 459 aa11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 DCAF12L1Q5VU92 463 aa11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 CGB2Q6NT52 195 aa11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 CCDC137Q6PK04 289 aaKnown RBP11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 C4orf50Q6ZRC1 276 aa11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 ANKRD42Q8N9B4 389 aa11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 ANKLE1Q8NAG6 615 aa11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 BBOF1Q8ND07 529 aa11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 SLC7A6OSQ96CW6 309 aaPredicted RBP11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 MFSD14AQ96MC6 490 aa11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 PLEKHG4BQ96PX9 1271 aa11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 AGPAT1Q99943 283 aa11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 PLVAPQ9BX97 442 aa11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 DENND2DQ9H6A0 471 aaPredicted RBP11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 PPCSQ9HAB8 311 aa11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 BTBD7Q9P203 1132 aa11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 STX18Q9P2W9 335 aaKnown RBP11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 SMG5Q9UPR3 1016 aaKnown RBP11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 ECEL1O95672 775 aa11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 CCDC166P0CW27 439 aa11.63□□□□□ -0.55
TUBA1C-209ENST00000552448 PYGBP11216 843 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms