RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 TRIB1Q96RU8 372 aa4.32□□□□□ -1.72
SCAF11-215ENST00000551391 P2RX7Q99572 595 aaKnown RBP4.32□□□□□ -1.72
SCAF11-215ENST00000551391 ZSWIM1Q9BR11 485 aa4.32□□□□□ -1.72
SCAF11-215ENST00000551391 SPATA5L1Q9BVQ7 753 aa4.32□□□□□ -1.72
SCAF11-215ENST00000551391 ZNF700Q9H0M5 742 aa4.32□□□□□ -1.72
SCAF11-215ENST00000551391 SMURF2Q9HAU4 748 aa4.32□□□□□ -1.72
SCAF11-215ENST00000551391 KIAA1586Q9HCI6 787 aa4.32□□□□□ -1.72
SCAF11-215ENST00000551391 GALNT9Q9HCQ5 603 aa4.32□□□□□ -1.72
SCAF11-215ENST00000551391 GPRC5BQ9NZH0 403 aa4.32□□□□□ -1.72
SCAF11-215ENST00000551391 CDYLQ9Y232 598 aa4.32□□□□□ -1.72
SCAF11-215ENST00000551391 HS3ST4Q9Y661 456 aa4.32□□□□□ -1.72
SCAF11-215ENST00000551391 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.32□□□□□ -1.72
SCAF11-215ENST00000551391 A0A087WWL8 130 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 PRAMEF33A0A0G2JMD5 474 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 CCDC194A0A1B0GVG4 234 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 APAF1O14727 1248 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 FOXN1O15353 648 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 TBC1D4O60343 1298 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 PRAMEF10O60809 474 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 CDKL5O76039 1030 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 SUN1O94901 812 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 UNC5CO95185 931 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 KIF20AO95235 890 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 NDUFA10O95299 355 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 CYP2C9P11712 490 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 SLC5A1P13866 664 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 DDX6P26196 483 aaKnown RBP eCLIP4.31□□□□□ -1.72
SCAF11-215ENST00000551391 VIPR2P41587 438 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 ANXA11P50995 505 aaKnown RBP4.31□□□□□ -1.72
SCAF11-215ENST00000551391 SUMO3P55854 103 aaPredicted RBP4.31□□□□□ -1.72
SCAF11-215ENST00000551391 RESTQ13127 1097 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 HLXQ14774 488 aaPredicted RBP4.31□□□□□ -1.72
SCAF11-215ENST00000551391 CYP2A13Q16696 494 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 TIGD2Q4W5G0 525 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 LMBRD2Q68DH5 695 aaPredicted RBP4.31□□□□□ -1.72
SCAF11-215ENST00000551391 TAPT1Q6NXT6 567 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 CCDC146Q8IYE0 955 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 COLGALT2Q8IYK4 626 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 SYNE4Q8N205 404 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 CPEB3Q8NE35 698 aaKnown RBP4.31□□□□□ -1.72
SCAF11-215ENST00000551391 NACC2Q96BF6 587 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 MOGAT1Q96PD6 335 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 ADAM2Q99965 735 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 HEPHQ9BQS7 1158 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 ZNF518BQ9C0D4 1074 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 WDR26Q9H7D7 661 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 ZNF287Q9HBT7 754 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 AFF4Q9UHB7 1163 aaKnown RBP4.31□□□□□ -1.72
SCAF11-215ENST00000551391 MTO1Q9Y2Z2 717 aaKnown RBP4.31□□□□□ -1.72
SCAF11-215ENST00000551391 PCDHGB6Q9Y5F9 930 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 NOX1Q9Y5S8 564 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 TNFRSF18Q9Y5U5 241 aa4.31□□□□□ -1.72
SCAF11-215ENST00000551391 TRIM43BA6NCK2 446 aa4.3□□□□□ -1.72
SCAF11-215ENST00000551391 M0QYG6 137 aa4.3□□□□□ -1.72
SCAF11-215ENST00000551391 PLIN1O60240 522 aa4.3□□□□□ -1.72
SCAF11-215ENST00000551391 PQBP1O60828 265 aaKnown RBP4.3□□□□□ -1.72
SCAF11-215ENST00000551391 ZFPL1O95159 310 aa4.3□□□□□ -1.72
SCAF11-215ENST00000551391 FOSP01100 380 aaPredicted RBP4.3□□□□□ -1.72
SCAF11-215ENST00000551391 GRPP07492 148 aa4.3□□□□□ -1.72
SCAF11-215ENST00000551391 NBPF7P0C2Y1 421 aaPredicted RBP4.3□□□□□ -1.72
SCAF11-215ENST00000551391 XRCC6P12956 609 aaKnown RBP eCLIP4.3□□□□□ -1.72
SCAF11-215ENST00000551391 SLC11A2P49281 568 aa4.3□□□□□ -1.72
SCAF11-215ENST00000551391 TOB1P50616 345 aaPredicted RBP4.3□□□□□ -1.72
SCAF11-215ENST00000551391 VAV2P52735 878 aa4.3□□□□□ -1.72
SCAF11-215ENST00000551391 WNT3P56703 355 aa4.3□□□□□ -1.72
SCAF11-215ENST00000551391 RPS7P62081 194 aaKnown RBP4.3□□□□□ -1.72
SCAF11-215ENST00000551391 SLC13A2Q13183 592 aa4.3□□□□□ -1.72
SCAF11-215ENST00000551391 CTBP1Q13363 440 aa4.3□□□□□ -1.72
SCAF11-215ENST00000551391 DYRK1AQ13627 763 aa4.3□□□□□ -1.72
SCAF11-215ENST00000551391 RAB32Q13637 225 aa4.3□□□□□ -1.72
SCAF11-215ENST00000551391 SLC44A4Q53GD3 710 aa4.3□□□□□ -1.72
SCAF11-215ENST00000551391 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.3□□□□□ -1.72
SCAF11-215ENST00000551391 MICALCLQ6ZW33 695 aa4.3□□□□□ -1.72
SCAF11-215ENST00000551391 MRGPREQ86SM8 312 aa4.3□□□□□ -1.72
SCAF11-215ENST00000551391 SVIPQ8NHG7 77 aa4.3□□□□□ -1.72
SCAF11-215ENST00000551391 MAML1Q92585 1016 aa4.3□□□□□ -1.72
SCAF11-215ENST00000551391 TRIM43Q96BQ3 446 aaPredicted RBP4.3□□□□□ -1.72
SCAF11-215ENST00000551391 ZC3H10Q96K80 434 aaKnown RBP4.3□□□□□ -1.72
SCAF11-215ENST00000551391 STRBPQ96SI9 672 aaKnown RBP4.3□□□□□ -1.72
SCAF11-215ENST00000551391 NAA15Q9BXJ9 866 aaKnown RBP4.3□□□□□ -1.72
SCAF11-215ENST00000551391 ALOXE3Q9BYJ1 711 aa4.3□□□□□ -1.72
SCAF11-215ENST00000551391 UNKQ9C0B0 810 aaKnown RBP4.3□□□□□ -1.72
SCAF11-215ENST00000551391 NRDE2Q9H7Z3 1164 aa4.3□□□□□ -1.72
SCAF11-215ENST00000551391 STK32BQ9NY57 414 aa4.3□□□□□ -1.72
SCAF11-215ENST00000551391 CPNE7Q9UBL6 633 aa4.3□□□□□ -1.72
SCAF11-215ENST00000551391 HESX1Q9UBX0 185 aa4.3□□□□□ -1.72
SCAF11-215ENST00000551391 OGDHLQ9ULD0 1010 aa4.3□□□□□ -1.72
SCAF11-215ENST00000551391 MAP3K2Q9Y2U5 619 aa4.3□□□□□ -1.72
SCAF11-215ENST00000551391 TMX2Q9Y320 296 aa4.3□□□□□ -1.72
SCAF11-215ENST00000551391 CENPVL1A0A0U1RR11 272 aa4.29□□□□□ -1.72
SCAF11-215ENST00000551391 MYO1CO00159 1063 aa4.29□□□□□ -1.72
SCAF11-215ENST00000551391 PMM2O15305 246 aa4.29□□□□□ -1.72
SCAF11-215ENST00000551391 SPDEFO95238 335 aa4.29□□□□□ -1.72
SCAF11-215ENST00000551391 MAP4K4O95819 1239 aaPredicted RBP4.29□□□□□ -1.72
SCAF11-215ENST00000551391 BRAFP15056 766 aa4.29□□□□□ -1.72
SCAF11-215ENST00000551391 UCP3P55916 312 aa4.29□□□□□ -1.72
SCAF11-215ENST00000551391 BLOC1S1P78537 153 aa4.29□□□□□ -1.72
SCAF11-215ENST00000551391 GUCY1B3Q02153 619 aa4.29□□□□□ -1.72
SCAF11-215ENST00000551391 PICALMQ13492 652 aa4.29□□□□□ -1.72
SCAF11-215ENST00000551391 LONRF3Q496Y0 759 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms