RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 ZNF76P36508 570 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 RGS2P41220 211 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 CYLC2Q14093 348 aaPredicted RBP13.3□□□□□ -0.28
SMG8-202ENST00000543872 KRT72Q14CN4 511 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 B3GNT6Q6ZMB0 384 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 TRIM67Q6ZTA4 783 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 ZNF713Q8N859 430 aaPredicted RBP13.3□□□□□ -0.28
SMG8-202ENST00000543872 LMO3Q8TAP4 145 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 CYP2W1Q8TAV3 490 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 GDPD5Q8WTR4 605 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 DHX38Q92620 1227 aaKnown RBP13.3□□□□□ -0.28
SMG8-202ENST00000543872 GPR101Q96P66 508 aaPredicted RBP13.3□□□□□ -0.28
SMG8-202ENST00000543872 PARVGQ9HBI0 331 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 UVRAGQ9P2Y5 699 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 KAT6AQ92794 2004 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 SLIT2O94813 1529 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 MYOCOSA0A1B0GUC4 107 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 SMIM31A0A1B0GVY4 71 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 GOLGA8IPA6NC78 632 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 GOLGA8JA6NMD2 632 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 ATP2A1O14983 1001 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 MAGEC1O60732 1142 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 TM7SF2O76062 418 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 GZMAP12544 262 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 SMARCA1P28370 1054 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 SLC25A3Q00325 362 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 GAD2Q05329 585 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 CCDC92Q53HC0 331 aaPredicted RBP13.3□□□□□ -0.28
SMG8-202ENST00000543872 DPP8Q6V1X1 898 aaPredicted RBP13.3□□□□□ -0.28
SMG8-202ENST00000543872 PDSS2Q86YH6 399 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 ARID3BQ8IVW6 561 aaPredicted RBP13.3□□□□□ -0.28
SMG8-202ENST00000543872 PIP4K2CQ8TBX8 421 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 CPA5Q8WXQ8 436 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 DNPEPQ9ULA0 475 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 PCDHA1Q9Y5I3 950 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 EML1O00423 815 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 PDE5AO76074 875 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 CLPTM1O96005 669 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 BTDP43251 543 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 GEMIN4P57678 1058 aaKnown RBP13.3□□□□□ -0.28
SMG8-202ENST00000543872 RPS8P62241 208 aaKnown RBP13.3□□□□□ -0.28
SMG8-202ENST00000543872 PICALMQ13492 652 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 CCNG2Q16589 344 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 ATP13A4Q4VNC1 1196 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 TMEM259Q4ZIN3 620 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 ASPRV1Q53RT3 343 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 C3orf62Q6ZUJ4 267 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 SLC51AQ86UW1 340 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 PYROXD1Q8WU10 500 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 CCDC127Q96BQ5 260 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 HSPBAP1Q96EW2 488 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 PAFAH2Q99487 392 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 EIF2AK1Q9BQI3 630 aaKnown RBP13.3□□□□□ -0.28
SMG8-202ENST00000543872 SIKE1Q9BRV8 207 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 OXCT2Q9BYC2 517 aaPredicted RBP13.3□□□□□ -0.28
SMG8-202ENST00000543872 KLHL4Q9C0H6 718 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 CYP4F11Q9HBI6 524 aa13.3□□□□□ -0.28
SMG8-202ENST00000543872 NOCTQ9UK39 431 aaKnown RBP13.3□□□□□ -0.28
SMG8-202ENST00000543872 BUD23O43709 281 aaKnown RBP13.29□□□□□ -0.28
SMG8-202ENST00000543872 MTA2O94776 668 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 SORBS2O94875 1100 aaKnown RBP13.29□□□□□ -0.28
SMG8-202ENST00000543872 TAL1P17542 331 aaPredicted RBP13.29□□□□□ -0.28
SMG8-202ENST00000543872 CLK2P49760 499 aaKnown RBP13.29□□□□□ -0.28
SMG8-202ENST00000543872 CHN2P52757 468 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 SLC18A1P54219 525 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 ARHGAP4P98171 946 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 RABGAP1LQ5R372 815 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 IYDQ6PHW0 289 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 KLHDC10Q6PID8 442 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 C1orf228Q6PIY5 440 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 CENPUQ71F23 418 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 DHDDSQ86SQ9 333 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 TDRPQ86YL5 185 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 POU5F2Q8N7G0 328 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 ZSWIM2Q8NEG5 633 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 BRD8Q9H0E9 1235 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 C10orf88Q9H8K7 445 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 SPATA31A1Q5TZJ5 1347 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 MSLNQ13421 630 aaPredicted RBP13.29□□□□□ -0.28
SMG8-202ENST00000543872 ACAP1Q15027 740 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 C16orf86Q6ZW13 317 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 ANKS1BQ7Z6G8 1248 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 ZNF276Q8N554 614 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 KREMEN1Q96MU8 473 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 VPS11Q9H270 941 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 PCDH18Q9HCL0 1135 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 S100A14Q9HCY8 104 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 ADAMTS6Q9UKP5 1117 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 ARAP2Q8WZ64 1704 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 ATAD5Q96QE3 1844 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 BOLA2-SMG1P6H3BVE0 249 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 DNALI1O14645 258 aaPredicted RBP13.29□□□□□ -0.28
SMG8-202ENST00000543872 VILLO15195 856 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 CAMTA2O94983 1202 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 FDX1P10109 184 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 CDK4P11802 303 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 GAP43P17677 238 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 VAMP7P51809 220 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 SLC44A4Q53GD3 710 aa13.29□□□□□ -0.28
SMG8-202ENST00000543872 FAM182AQ5T1J6 154 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms